Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007893.1 Olea europaea HOM05D005676 ORTHO05D007375 0.0e+00 1126.3 580 100.0
Oeu043238.1 Olea europaea HOM05D005676 ORTHO05D007375 1.7e-87 327.8 483 43.5
MSTRG.17345 Avicennia marina HOM05D005676 ORTHO05D007375 1.6e-85 321.2 617 37.9
Cc02_g39430 Coffea canephora HOM05D005676 ORTHO05D007375 1.1e-81 308.5 539 38.4
Migut.B01876 Erythranthe guttata HOM05D005676 ORTHO05D007375 4.5e-80 303.1 577 36.6
Dinv32595 Davidia involucrata HOM05D005676 ORTHO05D007375 7.6e-80 302.4 542 36.9
Nitab4.5_0013740g0030 Nicotiana tabacum HOM05D005676 ORTHO05D007375 1.4e-78 298.1 500 38.6
SalBow3G4648 Salvia bowleyana HOM05D005676 ORTHO05D007375 5.5e-78 296.2 607 35.4
SalBow6G4948 Salvia bowleyana HOM05D005676 ORTHO05D007375 7.2e-78 295.8 559 36.9
CSS0030996 Camellia sinensis var. sinensis HOM05D005676 ORTHO05D007375 1.6e-77 294.7 559 37.0
PGSC0003DMG400000228 Solanum tuberosum HOM05D005676 ORTHO05D007375 2.1e-77 294.3 505 37.4
Cfa003798 Carpinus fangiana HOM05D005676 ORTHO05D007375 1.1e-75 288.5 529 37.8
Sopen01g039730 Solanum pennellii HOM05D005676 ORTHO05D007375 2.8e-74 283.9 505 36.2
Solyc01g096010.4 Solanum lycopersicum HOM05D005676 ORTHO05D007375 6.3e-74 282.7 506 36.6
Potri.014G099100 Populus trichocarpa HOM05D005676 ORTHO05D007375 1.4e-73 281.6 562 35.8
CiPaw.02G041000 Carya illinoinensis HOM05D005676 ORTHO05D007375 1.8e-73 281.2 556 35.8
Hma1.2p1_0139F.1_g063260 Hydrangea macrophylla HOM05D005676 ORTHO05D007375 2.4e-73 280.8 549 35.2
Nitab4.5_0000172g0490 Nicotiana tabacum HOM05D005676 ORTHO05D007375 3.1e-73 280.4 561 35.8
FAN10G0710 Fragaria x ananassa HOM05D005676 ORTHO05D007375 2.6e-72 277.3 504 35.5
FAN10G1066 Fragaria x ananassa HOM05D005676 ORTHO05D007375 2.6e-72 277.3 504 35.7
SGA_v2.0_scaffold5G03020 Striga asiatica HOM05D005676 ORTHO05D007375 2.6e-72 277.3 549 36.1
Sabra14G0072700 Salix brachista HOM05D005676 ORTHO05D007375 3.4e-72 276.9 528 35.4
Peaxi162Scf00786g00018 Petunia axillaris HOM05D005676 ORTHO05D007375 4.5e-72 276.6 528 35.8
QL04p060782 Quercus lobata HOM05D005676 ORTHO05D007375 4.5e-72 276.6 554 36.5
CAN.G1415.28 Capsicum annuum HOM05D005676 ORTHO05D007375 1.3e-71 275.0 683 32.7
RcHm_v2.0_Chr1g0359591 Rosa chinensis HOM05D005676 ORTHO05D007375 6.5e-71 272.7 539 34.5
Ca_23531_v3 Cicer arietinum L. HOM05D005676 ORTHO05D007375 8.5e-71 272.3 660 33.0
FAN06G1134 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.9e-70 271.2 541 34.9
FAN06G4290 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.9e-70 271.2 541 34.9
TAR636G2851 Trochodendron aralioides HOM05D005676 ORTHO05D007375 1.9e-70 271.2 514 36.0
Glyma.16G024100 Glycine max HOM05D005676 ORTHO05D007375 3.2e-70 270.4 530 35.5
FvH4_7g16470 Fragaria vesca HOM05D005676 ORTHO05D007375 5.5e-70 269.6 541 34.8
Prupe.2G189000 Prunus persica HOM05D005676 ORTHO05D007375 7.2e-70 269.2 504 35.7
FAN03G1248 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.2e-69 268.5 531 34.8
Lj9A598G65 Lonicera japonica HOM05D005676 ORTHO05D007375 3.6e-69 266.9 486 38.1
Duzib268G0021 Durio zibethinus HOM05D005676 ORTHO05D007375 7.9e-69 265.8 559 35.1
Sc01g0002640 Simmondsia chinensis HOM05D005676 ORTHO05D007375 7.9e-69 265.8 533 35.3
Thecc.01G342000 Theobroma cacao HOM05D005676 ORTHO05D007375 7.9e-69 265.8 529 35.9
Gohir.A11G096900 Gossypium hirsutum HOM05D005676 ORTHO05D007375 1.4e-68 265.0 559 35.1
unitig_899.g14797 Utricularia gibba HOM05D005676 ORTHO05D007375 2.3e-68 264.2 451 37.7
Actinidia10141 Actinidia chinensis HOM05D005676 ORTHO05D007375 3.0e-68 263.8 603 32.3
arahy.Tifrunner.gnm1.ann1.FH2LCI Arachis hypogaea HOM05D005676 ORTHO05D007375 3.9e-68 263.5 645 32.2
Sed0007378 Sechium edule HOM05D005676 ORTHO05D007375 3.9e-68 263.5 536 35.1
Lalb_Chr17g0342721 Lupinus albus HOM05D005676 ORTHO05D007375 5.1e-68 263.1 527 35.3
Hund16716 Selenicereus undatus HOM05D005676 ORTHO05D007375 5.1e-68 263.1 501 35.7
TPR.G16793 Trifolium pratense HOM05D005676 ORTHO05D007375 5.1e-68 263.1 674 31.0
PGR031G0643 Punica granatum HOM05D005676 ORTHO05D007375 6.7e-68 262.7 528 34.7
Haze_15661 Corylus avellana HOM05D005676 ORTHO05D007375 1.1e-67 261.9 498 38.2
arahy.Tifrunner.gnm1.ann1.L1WQQA Arachis hypogaea HOM05D005676 ORTHO05D007375 1.5e-67 261.5 675 31.9
THA.LOC104817362 Tarenaya hassleriana HOM05D005676 ORTHO05D007375 1.5e-67 261.5 607 33.4
VMungo0331G0849 Vigna mungo HOM05D005676 ORTHO05D007375 2.0e-67 261.2 649 32.8
AUR62023455 Chenopodium quinoa HOM05D005676 ORTHO05D007375 2.5e-67 260.8 467 36.0
Gorai.007G108400 Gossypium raimondii HOM05D005676 ORTHO05D007375 2.5e-67 260.8 541 34.6
Medtr8g027605 Medicago truncatula HOM05D005676 ORTHO05D007375 2.5e-67 260.8 555 34.8
CsaV3_3G008030 Cucumis sativus L. HOM05D005676 ORTHO05D007375 7.4e-67 259.2 544 34.4
Lj3g0008614 Lotus japonicus HOM05D005676 ORTHO05D007375 1.3e-66 258.5 526 35.2
AL5G44340 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 2.2e-66 257.7 499 35.3
Eucgr.D02379 Eucalyptus grandis HOM05D005676 ORTHO05D007375 2.2e-66 257.7 626 32.7
Manes.01G246200 Manihot esculenta HOM05D005676 ORTHO05D007375 2.2e-66 257.7 560 33.6
DCAR_005392 Daucus carota HOM05D005676 ORTHO05D007375 3.7e-66 256.9 487 35.5
ECA246G1832 Erigeron canadensis HOM05D000467 ORTHO05D000379 6.3e-66 256.1 552 32.6
AUR62004498 Chenopodium quinoa HOM05D005676 ORTHO05D007375 8.2e-66 255.8 528 33.5
ClCG05G000790 Citrullus lanatus HOM05D005676 ORTHO05D007375 1.1e-65 255.4 572 35.5
AT3G61780 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 9.1e-65 252.3 630 31.9
EL10Ac1g00264 Beta vulgaris HOM05D005676 ORTHO05D007375 1.2e-64 251.9 521 34.5
MD01G1081300 Malus domestica HOM05D005676 ORTHO05D007375 2.0e-64 251.1 533 34.0
Nn1g00247 Nelumbo nucifera HOM05D005676 ORTHO05D007375 2.0e-64 251.1 553 34.4
Carub.0005s2852 Capsella rubella HOM05D005676 ORTHO05D007375 4.5e-64 250.0 484 34.5
Thhalv10005757m.g Eutrema salsugineum HOM05D005676 ORTHO05D007375 4.5e-64 250.0 516 34.9
Aqoxy7G00081 Aquilegia oxysepala HOM05D005676 ORTHO05D007375 5.9e-64 249.6 605 31.2
MELO3C006021.2 Cucumis melo HOM05D005676 ORTHO05D007375 5.0e-63 246.5 545 34.3
HanXRQChr11g0352981 Helianthus annuus HOM05D005676 ORTHO05D007375 6.5e-63 246.1 499 33.5
Phvul.010G114600 Phaseolus vulgaris HOM05D005676 ORTHO05D007375 8.5e-63 245.7 529 34.4
Aa31LG10G15770 Aethionema arabicum HOM05D005676 ORTHO05D007375 4.2e-62 243.4 612 32.7
BcaC08g45161 Brassica carinata HOM05D005676 ORTHO05D007375 4.2e-62 243.4 629 31.8
C06p27960 Brassica napus HOM05D005676 ORTHO05D007375 4.2e-62 243.4 629 31.8
A07p25740 Brassica napus HOM05D005676 ORTHO05D007375 7.2e-62 242.7 641 31.0
BraA07t30214Z Brassica rapa HOM05D005676 ORTHO05D007375 7.2e-62 242.7 641 31.0
CDE02G4093 Ceratophyllum demersum HOM05D005676 ORTHO05D007375 7.2e-62 242.7 480 34.4
CARHR172110 Cardamine hirsuta HOM05D005676 ORTHO05D007375 2.1e-61 241.1 485 35.1
Psat4g161440 Pisum sativum HOM05D005676 ORTHO05D007375 2.7e-61 240.7 573 31.4
BolC6t37957H Brassica oleracea HOM05D005676 ORTHO05D007375 4.7e-61 240.0 638 31.3
Ah.05g179510 Amaranthus hybridus HOM05D005676 ORTHO05D007375 3.9e-60 236.9 662 29.6
Lsat_1_v5_gn_3_140321 Lactuca sativa HOM05D005676 ORTHO05D007375 8.8e-60 235.7 605 31.2
Atru.chr5.673 Acer truncatum HOM05D005676 ORTHO05D007375 6.3e-58 229.6 532 33.5
Sp5g01590 Schrenkiella parvula HOM05D005676 ORTHO05D007375 1.8e-57 228.0 593 31.2
GSVIVG01027152001 Vitis vinifera HOM05D005676 ORTHO05D007375 5.3e-57 226.5 430 35.6
MBI06_g46583_MAGBIO Magnolia biondii HOM05D005676 ORTHO05D007375 9.1e-57 225.7 543 32.4
Cpa.g.sc96.24 Carica papaya HOM05D005676 ORTHO05D007375 3.5e-56 223.8 512 32.6
Ciclev10023383m.g Citrus clementina HOM05D005676 ORTHO05D007375 4.7e-53 213.4 482 33.6
COL.COLO4_06282 Corchorus olitorius HOM05D005676 ORTHO05D007375 8.2e-50 202.6 530 32.8
BcaC08g45164 Brassica carinata HOM05D005676 ORTHO05D007375 1.1e-46 192.2 477 31.4
Gohir.D11G101600 Gossypium hirsutum HOM05D005676 ORTHO05D007375 4.7e-37 160.2 202 47.5
AL5G43810 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 5.2e-36 156.8 393 33.3
ATR0602G016 Amborella trichopoda HOM05D005676 ORTHO05D007375 1.5e-30 138.7 466 27.5
Actinidia20244 Actinidia chinensis HOM05D005676 ORTHO05D007375 2.8e-29 134.4 144 50.0
Glyma.07G055432 Glycine max HOM05D005676 ORTHO05D007375 1.4e-28 132.1 194 41.2
MD07G1150200 Malus domestica HOM05D005676 ORTHO05D007375 4.4e-27 127.1 328 31.7
MD07G1150100 Malus domestica HOM05D005676 ORTHO05D007375 3.2e-25 120.9 165 42.4
FAN06G2271 Fragaria x ananassa HOM05D005676 ORTHO05D007375 3.0e-23 114.4 130 46.2
AT5G28400 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 9.5e-22 109.4 289 32.2
Gohir.D11G101550 Gossypium hirsutum HOM05D005676 ORTHO05D007375 1.4e-17 95.5 185 34.1
FAN03G3457 Fragaria x ananassa HOM05D005676 ORTHO05D007375 4.7e-13 80.5 141 35.5
AT5G28320 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 8.9e-12 76.3 307 27.4
SEGI_31295 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 1.2e-08 65.9 330 24.2
SEGI_23777 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 1.6e-08 65.5 140 34.3
Mapoly0008s0022 Marchantia polymorpha HOM05D005676 ORTHO05D007375 2.1e-08 65.1 224 28.6
Pp3c12_1870 Physcomitrium patens HOM05D005676 ORTHO05D007375 6.0e-08 63.5 91 40.7
AagrBONN_evm.TU.Sc2ySwM_368.2853 Anthoceros agrestis HOM05D005676 ORTHO05D007375 1.0e-07 62.8 79 40.5


User provided reference genes

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