Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 3.3e-98 361.7 178 100.0
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 3.3e-90 335.1 178 91.6
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 2.8e-89 332.0 178 91.0
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 1.0e-88 330.1 178 87.6
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 1.8e-88 329.3 180 88.9
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 2.3e-88 328.9 178 91.0
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 8.9e-88 327.0 178 89.9
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 1.2e-87 326.6 184 88.6
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 2.0e-87 325.9 178 89.3
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 2.0e-87 325.9 178 88.2
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 7.5e-87 323.9 178 88.2
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 9.8e-87 323.6 178 87.6
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 1.7e-86 322.8 178 86.5
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 2.9e-86 322.0 178 88.2
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 7.0e-85 317.4 178 87.1
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 7.0e-85 317.4 178 87.6
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 1.2e-84 316.6 178 87.6
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 1.2e-84 316.6 178 87.6
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 2.7e-84 315.5 178 88.2
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 2.7e-84 315.5 178 86.5
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 6.0e-84 314.3 178 86.5
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 6.0e-84 314.3 178 83.1
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 1.0e-83 313.5 178 84.8
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 2.3e-83 312.4 178 84.8
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 2.3e-83 312.4 179 85.5
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 3.9e-83 311.6 179 84.9
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 6.6e-83 310.8 173 87.3
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 1.5e-82 309.7 178 84.8
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 2.5e-82 308.9 177 84.2
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 3.3e-82 308.5 180 86.1
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 7.3e-82 307.4 178 83.1
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 7.3e-82 307.4 178 83.1
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 7.3e-82 307.4 178 83.1
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 7.3e-82 307.4 178 83.1
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 7.3e-82 307.4 178 83.1
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 7.3e-82 307.4 178 83.1
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 7.3e-82 307.4 178 84.3
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 9.5e-82 307.0 178 83.1
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.2e-81 306.6 178 83.7
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 1.6e-81 306.2 178 84.3
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 1.6e-81 306.2 207 77.3
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 1.6e-81 306.2 178 82.6
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 2.1e-81 305.8 182 83.5
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 2.1e-81 305.8 178 83.7
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 2.8e-81 305.4 178 83.1
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 2.8e-81 305.4 178 83.7
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 2.8e-81 305.4 178 84.8
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 4.7e-81 304.7 178 83.1
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 4.7e-81 304.7 178 82.6
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 8.1e-81 303.9 178 83.1
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 1.1e-80 303.5 178 82.6
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 1.8e-80 302.8 178 82.0
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 1.8e-80 302.8 178 83.1
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 1.8e-80 302.8 178 83.1
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 2.3e-80 302.4 178 82.6
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 2.3e-80 302.4 179 82.7
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 3.1e-80 302.0 178 82.6
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 4.0e-80 301.6 178 82.6
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 4.0e-80 301.6 178 81.5
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 4.0e-80 301.6 178 82.6
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 5.2e-80 301.2 178 83.1
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 6.8e-80 300.8 178 83.1
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 6.8e-80 300.8 178 83.1
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 6.8e-80 300.8 178 82.6
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 6.8e-80 300.8 178 81.5
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 8.9e-80 300.4 178 83.1
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 2.6e-79 298.9 178 82.6
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 2.6e-79 298.9 178 82.0
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 3.4e-79 298.5 178 80.9
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 4.4e-79 298.1 179 82.7
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 7.5e-79 297.4 178 83.1
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 2.9e-78 295.4 178 82.0
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 6.4e-78 294.3 178 80.3
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 1.1e-77 293.5 181 79.6
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 1.1e-77 293.5 181 79.6
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 1.1e-77 293.5 181 79.6
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 1.1e-77 293.5 181 79.6
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 4.1e-77 291.6 179 80.4
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 5.4e-77 291.2 178 79.8
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 7.1e-77 290.8 181 78.5
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 7.1e-77 290.8 179 78.8
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 1.2e-76 290.0 183 78.1
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 2.7e-76 288.9 178 80.3
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 2.7e-76 288.9 178 83.1
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 3.5e-76 288.5 178 77.5
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 6.0e-76 287.7 181 77.3
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.3e-75 286.6 181 76.8
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 1.7e-75 286.2 181 77.3
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 2.3e-75 285.8 178 78.7
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 3.0e-75 285.4 164 86.0
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 1.1e-74 283.5 181 75.7
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 1.1e-74 283.5 178 78.1
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 1.9e-74 282.7 187 78.6
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 8.1e-73 277.3 170 81.8
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 8.1e-73 277.3 178 75.3
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 3.1e-72 275.4 159 86.2
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 1.2e-71 273.5 191 73.8
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 2.9e-70 268.9 178 74.7
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 1.2e-68 263.5 178 73.6
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 4.6e-68 261.5 178 72.5
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 5.1e-67 258.1 154 81.2
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 9.6e-66 253.8 198 68.2
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 8.1e-65 250.8 157 79.0
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 3.1e-64 248.8 168 76.2
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 7.6e-63 244.2 178 71.3
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 1.7e-62 243.0 178 68.5
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 6.0e-60 234.6 181 68.0
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 4.0e-56 221.9 178 63.5
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 2.4e-53 212.6 116 86.2
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 5.4e-53 211.5 186 57.5
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 1.3e-51 206.8 178 60.1
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 8.7e-51 204.1 118 83.1
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 5.3e-48 194.9 118 79.7
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 2.6e-47 192.6 114 81.6
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 4.5e-47 191.8 171 56.1
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.4e-45 186.8 119 79.0
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 3.5e-44 182.2 174 52.9
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 3.8e-30 135.6 76 86.8
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.7e-25 120.2 162 44.4
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 2.8e-25 119.4 116 55.2
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 2.3e-11 73.2 44 72.7
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 6.3e-09 65.1 34 85.3


User provided reference genes

Program Settings