Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007855.1 Olea europaea HOM05D007041 ORTHO05D008036 4.2e-69 264.6 137 100.0
Oeu007854.1 Olea europaea HOM05D007041 ORTHO05D008036 1.6e-20 103.2 156 41.7
Nitab4.5_0007594g0010 Nicotiana tabacum HOM05D007041 ORTHO05D008036 2.7e-12 75.9 107 43.9
vmacro22517 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 4.7e-12 75.1 103 45.6
Rhsim01G0170200 Rhododendron simsii HOM05D007041 ORTHO05D008036 1.4e-11 73.6 108 42.6
SalBow3G2736 Salvia bowleyana HOM05D007041 ORTHO05D008036 4.0e-11 72.0 97 42.3
Rhsim01G0170500 Rhododendron simsii HOM05D007041 ORTHO05D008036 3.4e-10 68.9 93 43.0
Nitab4.5_0000305g0050 Nicotiana tabacum HOM05D007041 ORTHO05D008036 4.4e-10 68.6 124 41.1
vmacro22515 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 1.3e-09 67.0 106 40.6
Rhsim07G0006100 Rhododendron simsii HOM05D000337 ORTHO05D000297 1.7e-09 66.6 105 43.8
vmacro22516 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 8.3e-09 64.3 100 40.0
Lsat_1_v5_gn_7_2180 Lactuca sativa HOM05D007041 ORTHO05D008036 1.1e-08 63.9 113 41.6
Migut.B01841 Erythranthe guttata HOM05D007041 ORTHO05D008036 1.4e-08 63.5 96 40.6
Manes.05G025400 Manihot esculenta HOM05D007041 ORTHO05D008036 1.4e-08 63.5 102 35.3
Actinidia28494 Actinidia chinensis HOM05D000017 ORTHO05D008036 5.4e-08 61.6 109 41.3
CSS0039531 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 5.4e-08 61.6 94 40.4
Peaxi162Scf00843g00001 Petunia axillaris HOM05D007041 ORTHO05D008036 5.4e-08 61.6 116 36.2
Lalb_Chr17g0342361 Lupinus albus HOM05D007041 ORTHO05D008036 1.2e-07 60.5 94 37.2
TPR.G7661 Trifolium pratense HOM05D007041 ORTHO05D008036 1.2e-07 60.5 92 42.4
CiPaw.12G084900 Carya illinoinensis HOM05D007041 ORTHO05D008036 2.0e-07 59.7 54 51.9
CSS0019600 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 2.7e-07 59.3 92 38.0
CiPaw.02G039100 Carya illinoinensis HOM05D007041 ORTHO05D008036 2.7e-07 59.3 53 47.2
Sabra14G0070100 Salix brachista HOM05D007041 ORTHO05D008036 2.7e-07 59.3 44 56.8
COL.COLO4_06320 Corchorus olitorius HOM05D007041 ORTHO05D008036 3.5e-07 58.9 126 34.9
Prupe.2G184300 Prunus persica HOM05D007041 ORTHO05D008036 3.5e-07 58.9 108 34.3
QL02p031389 Quercus lobata HOM05D007041 ORTHO05D008036 3.5e-07 58.9 92 37.0
Sp5g01745 Schrenkiella parvula HOM05D007041 ORTHO05D008036 3.5e-07 58.9 51 51.0
Atru.chr5.628 Acer truncatum HOM05D007041 ORTHO05D008036 5.9e-07 58.2 98 40.8
EL10Ac1g00306 Beta vulgaris HOM05D007041 ORTHO05D008036 5.9e-07 58.2 95 37.9
CSS0049473 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 5.9e-07 58.2 92 35.9
Lj3g0003817 Lotus japonicus HOM05D007041 ORTHO05D008036 5.9e-07 58.2 97 43.3
Gohir.A07G139300 Gossypium hirsutum HOM05D007041 ORTHO05D008036 7.7e-07 57.8 97 38.1
MD07G1146000 Malus domestica HOM05D007041 ORTHO05D008036 7.7e-07 57.8 86 41.9
AT3G61660 Arabidopsis thaliana HOM05D007041 ORTHO05D008036 1.7e-06 56.6 53 49.1
CiPaw.01G073300 Carya illinoinensis HOM05D007041 ORTHO05D008036 1.7e-06 56.6 79 39.2
Thhalv10006386m.g Eutrema salsugineum HOM05D007041 ORTHO05D008036 1.7e-06 56.6 86 41.9
Zm00001eb310140 Zea mays HOM05D007041 ORTHO05D008036 1.7e-06 56.6 47 51.1
Zm00001eb441140 Zea mays HOM05D007041 ORTHO05D008036 1.7e-06 56.6 47 51.1
Medtr8g027905 Medicago truncatula HOM05D001941 ORTHO05D008036 2.3e-06 56.2 55 49.1
arahy.Tifrunner.gnm1.ann1.LKBY4F Arachis hypogaea HOM05D007041 ORTHO05D008036 2.9e-06 55.8 86 39.5
FAN03G1744 Fragaria x ananassa HOM05D007041 ORTHO05D008036 2.9e-06 55.8 116 36.2
Gohir.D08G147100 Gossypium hirsutum HOM05D007041 ORTHO05D008036 2.9e-06 55.8 105 34.3
Gorai.004G152600 Gossypium raimondii HOM05D007041 ORTHO05D008036 2.9e-06 55.8 105 34.3
Thecc.01G346300 Theobroma cacao HOM05D007041 ORTHO05D008036 2.9e-06 55.8 100 38.0
FAN10G1361 Fragaria x ananassa HOM05D007041 ORTHO05D008036 3.8e-06 55.5 127 31.5
FAN10G2988 Fragaria x ananassa HOM05D007041 ORTHO05D008036 3.8e-06 55.5 127 31.5
C08p36510 Brassica napus HOM05D007041 ORTHO05D008036 5.0e-06 55.1 98 35.7
BolC8t51234H Brassica oleracea HOM05D007041 ORTHO05D008036 5.0e-06 55.1 98 35.7
Haze_08658 Corylus avellana HOM05D007041 ORTHO05D008036 5.0e-06 55.1 68 42.6
Gohir.A12G234950 Gossypium hirsutum HOM05D007041 ORTHO05D008036 5.0e-06 55.1 94 38.3
PGSC0003DMG400000096 Solanum tuberosum HOM05D007041 ORTHO05D008036 5.0e-06 55.1 123 35.0
TAR629G2489 Trochodendron aralioides HOM05D007041 ORTHO05D008036 5.0e-06 55.1 98 36.7
FAN06G2039 Fragaria x ananassa HOM05D007041 ORTHO05D008036 6.6e-06 54.7 132 32.6
FAN06G3979 Fragaria x ananassa HOM05D007041 ORTHO05D008036 6.6e-06 54.7 63 41.3
Gohir.D07G144400 Gossypium hirsutum HOM05D007041 ORTHO05D008036 6.6e-06 54.7 96 33.3
Medtr8g027915 Medicago truncatula HOM05D007041 ORTHO05D008036 6.6e-06 54.7 98 37.8
Cpa.g.sc2382.1 Carica papaya HOM05D007041 ORTHO05D008036 8.6e-06 54.3 53 41.5


User provided reference genes

Program Settings