Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007830.1 Olea europaea HOM05D002105 ORTHO05D001271 6.9e-83 310.8 186 100.0
Oeu051068.1 Olea europaea HOM05D002105 ORTHO05D001271 6.3e-52 208.0 155 76.8
Oeu019314.1 Olea europaea HOM05D002105 ORTHO05D001271 1.2e-37 160.6 188 61.2
Oeu005407.1 Olea europaea HOM05D002105 ORTHO05D001271 1.5e-37 160.2 186 62.4
QL08p022033 Quercus lobata HOM05D002105 ORTHO05D001271 1.0e-30 137.5 186 53.8
SalBow7G4171 Salvia bowleyana HOM05D002105 ORTHO05D001271 3.0e-30 136.0 177 57.6
Hma1.2p1_0898F.1_g234460 Hydrangea macrophylla HOM05D002105 ORTHO05D001271 5.2e-30 135.2 160 56.2
Dinv20177 Davidia involucrata HOM05D002105 ORTHO05D001271 8.8e-30 134.4 171 50.9
Potri.001G399400 Populus trichocarpa HOM05D002105 ORTHO05D001271 1.2e-29 134.0 158 57.6
TAR624G0920 Trochodendron aralioides HOM05D002105 ORTHO05D001271 1.2e-29 134.0 187 49.7
CSS0030542 Camellia sinensis var. sinensis HOM05D002105 ORTHO05D001271 1.5e-29 133.7 163 53.4
Lj1C842G6 Lonicera japonica HOM05D002105 ORTHO05D001271 2.0e-29 133.3 159 54.7
Haze_09432 Corylus avellana HOM05D001020 ORTHO05D001137 4.4e-29 132.1 186 58.1
Dinv03896 Davidia involucrata HOM05D002105 ORTHO05D001271 1.7e-28 130.2 162 52.5
Dinv04301 Davidia involucrata HOM05D002105 ORTHO05D001271 1.7e-28 130.2 162 52.5
Sabra16G0261900 Salix brachista HOM05D002105 ORTHO05D001271 1.4e-27 127.1 159 54.1
Lj8A155G95 Lonicera japonica HOM05D002105 ORTHO05D001271 1.8e-27 126.7 156 53.8
Peaxi162Scf00000g03512 Petunia axillaris HOM05D002105 ORTHO05D001271 1.8e-27 126.7 161 55.3
ECA240G0380 Erigeron canadensis HOM05D002105 ORTHO05D001271 7.0e-27 124.8 158 53.8
Nitab4.5_0001241g0060 Nicotiana tabacum HOM05D002105 ORTHO05D001271 7.0e-27 124.8 183 49.7
Nitab4.5_0001336g0080 Nicotiana tabacum HOM05D002105 ORTHO05D001271 7.0e-27 124.8 188 53.7
Sabra11G0104100 Salix brachista HOM05D002105 ORTHO05D001271 7.0e-27 124.8 160 53.8
vmacro09530 Vaccinium macrocarpon HOM05D002105 ORTHO05D001271 1.2e-26 124.0 187 55.1
Nitab4.5_0000332g0070 Nicotiana tabacum HOM05D002105 ORTHO05D001271 1.6e-26 123.6 161 54.0
Migut.H01943 Erythranthe guttata HOM05D002105 ORTHO05D001271 2.0e-26 123.2 157 54.8
Cc05_g11980 Coffea canephora HOM05D002105 ORTHO05D001271 4.5e-26 122.1 182 56.6
TAR626G1709 Trochodendron aralioides HOM05D002105 ORTHO05D001271 4.5e-26 122.1 182 56.0
Rhsim04G0021400 Rhododendron simsii HOM05D002105 ORTHO05D001271 5.9e-26 121.7 192 54.7
Duzib170G0794 Durio zibethinus HOM05D002105 ORTHO05D001271 7.7e-26 121.3 159 53.5
Cpa.g.sc80.67 Carica papaya HOM05D002105 ORTHO05D001271 2.3e-25 119.8 178 51.7
CAN.G162.54 Capsicum annuum HOM05D002105 ORTHO05D001271 5.0e-25 118.6 189 53.4
MELO3C016696.2 Cucumis melo HOM05D002105 ORTHO05D001271 5.0e-25 118.6 182 50.5
Potri.011G119700 Populus trichocarpa HOM05D002105 ORTHO05D001271 5.0e-25 118.6 160 51.2
Thecc.07G090000 Theobroma cacao HOM05D002105 ORTHO05D001271 5.0e-25 118.6 159 52.8
CANSAT56G3600 Cannabis sativa HOM05D002105 ORTHO05D001271 8.6e-25 117.9 160 51.9
Manes.15G087400 Manihot esculenta HOM05D002105 ORTHO05D001271 8.6e-25 117.9 157 51.0
Peaxi162Scf00069g01513 Petunia axillaris HOM05D002105 ORTHO05D001271 1.1e-24 117.5 160 51.9
Manes.03G109600 Manihot esculenta HOM05D002105 ORTHO05D001271 1.9e-24 116.7 159 49.1
Sopen07g031290 Solanum pennellii HOM05D002105 ORTHO05D001271 1.9e-24 116.7 160 50.0
Gorai.013G168900 Gossypium raimondii HOM05D002105 ORTHO05D001271 2.5e-24 116.3 186 54.3
Gohir.A13G146000 Gossypium hirsutum HOM05D002105 ORTHO05D001271 9.5e-24 114.4 152 51.3
Gohir.D05G355400 Gossypium hirsutum HOM05D002105 ORTHO05D001271 9.5e-24 114.4 178 46.6
Gorai.009G387800 Gossypium raimondii HOM05D002105 ORTHO05D001271 9.5e-24 114.4 178 46.6
CiPaw.12G118700 Carya illinoinensis HOM05D002105 ORTHO05D001271 2.8e-23 112.8 160 51.9
CSS0000814 Camellia sinensis var. sinensis HOM05D002105 ORTHO05D001271 3.6e-23 112.5 162 49.4
Gohir.D13G150900 Gossypium hirsutum HOM05D002105 ORTHO05D001271 3.6e-23 112.5 152 51.3
CAN.G213.8 Capsicum annuum HOM05D002105 ORTHO05D001271 4.7e-23 112.1 157 51.0
Aa31LG5G10020 Aethionema arabicum HOM05D002105 ORTHO05D001271 6.1e-23 111.7 158 50.0
CiPaw.11G170100 Carya illinoinensis HOM05D002105 ORTHO05D001271 8.0e-23 111.3 154 53.9
CsaV3_4G033670 Cucumis sativus L. HOM05D002105 ORTHO05D001271 8.0e-23 111.3 188 52.1
PGSC0003DMG400012445 Solanum tuberosum HOM05D002105 ORTHO05D001271 8.0e-23 111.3 160 50.0
AT4G27500 Arabidopsis thaliana HOM05D002105 ORTHO05D001271 1.8e-22 110.2 161 47.8
Gohir.A04G030600 Gossypium hirsutum HOM05D002105 ORTHO05D001271 1.8e-22 110.2 178 44.4
PSO541G4007 Papaver somniferum HOM05D002105 ORTHO05D001271 2.3e-22 109.8 159 50.3
PSO675G3374 Papaver somniferum HOM05D002105 ORTHO05D001271 2.3e-22 109.8 159 50.9
THA.LOC104813390 Tarenaya hassleriana HOM05D002105 ORTHO05D001271 2.3e-22 109.8 167 49.7
Phvul.011G158400 Phaseolus vulgaris HOM05D002105 ORTHO05D001271 4.0e-22 109.0 158 47.5
arahy.Tifrunner.gnm1.ann1.92S0K9 Arachis hypogaea HOM05D002105 ORTHO05D001271 6.8e-22 108.2 158 50.0
Gohir.D05G355175 Gossypium hirsutum HOM05D002105 ORTHO05D001271 8.9e-22 107.8 173 47.4
Lj3g0009937 Lotus japonicus HOM05D002105 ORTHO05D001271 8.9e-22 107.8 160 50.6
Sed0025666 Sechium edule HOM05D002105 ORTHO05D001271 8.9e-22 107.8 165 45.5
MBI07_g30189_MAGBIO Magnolia biondii HOM05D002105 ORTHO05D001271 1.2e-21 107.5 165 50.3
Thhalv10027051m.g Eutrema salsugineum HOM05D002105 ORTHO05D001271 2.0e-21 106.7 152 46.7
Sed0026326 Sechium edule HOM05D002105 ORTHO05D001271 2.0e-21 106.7 188 45.7
TWI39G0142 Tripterygium wilfordii HOM05D002105 ORTHO05D001271 3.4e-21 105.9 161 47.2
arahy.Tifrunner.gnm1.ann1.E3CL15 Arachis hypogaea HOM05D002105 ORTHO05D001271 4.4e-21 105.5 158 49.4
FAN25G0802 Fragaria x ananassa HOM05D002105 ORTHO05D001271 4.4e-21 105.5 155 47.7
arahy.Tifrunner.gnm1.ann1.Y2CVLD Arachis hypogaea HOM05D002105 ORTHO05D001271 7.5e-21 104.8 158 48.1
FvH4_3g19880 Fragaria vesca HOM05D002105 ORTHO05D001271 7.5e-21 104.8 155 48.4
FAN11G1959 Fragaria x ananassa HOM05D002105 ORTHO05D001271 9.8e-21 104.4 155 49.7
MD11G1247800 Malus domestica HOM05D002105 ORTHO05D001271 1.3e-20 104.0 155 49.0
arahy.Tifrunner.gnm1.ann1.FLJ2SC Arachis hypogaea HOM05D002105 ORTHO05D001271 1.7e-20 103.6 158 48.1
Sp7g25440 Schrenkiella parvula HOM05D002105 ORTHO05D001271 1.7e-20 103.6 158 44.9
Ca_01848_v3 Cicer arietinum L. HOM05D002105 ORTHO05D001271 2.2e-20 103.2 157 46.5
FAN21G0480 Fragaria x ananassa HOM05D002105 ORTHO05D001271 2.8e-20 102.8 153 47.7
Lalb_Chr25g0286341 Lupinus albus HOM05D002105 ORTHO05D001271 2.8e-20 102.8 158 46.8
TWI38G1694 Tripterygium wilfordii HOM05D002105 ORTHO05D001271 2.8e-20 102.8 159 47.2
FAN16G0257 Fragaria x ananassa HOM05D002105 ORTHO05D001271 3.7e-20 102.4 155 47.7
Hma1.2p1_0531F.1_g173370 Hydrangea macrophylla HOM05D002105 ORTHO05D001271 3.7e-20 102.4 160 45.6
RcHm_v2.0_Chr5g0033561 Rosa chinensis HOM05D002105 ORTHO05D001271 3.7e-20 102.4 152 48.0
Thhalv10013033m.g Eutrema salsugineum HOM05D002105 ORTHO05D001271 4.9e-20 102.1 160 46.2
MD03G1228300 Malus domestica HOM05D002105 ORTHO05D001271 4.9e-20 102.1 156 47.4
Glyma.06G240500 Glycine max HOM05D002105 ORTHO05D001271 8.3e-20 101.3 157 48.4
Gohir.A01G063400 Gossypium hirsutum HOM05D002105 ORTHO05D001271 1.1e-19 100.9 156 45.5
Gohir.D01G049800 Gossypium hirsutum HOM05D002105 ORTHO05D001271 1.1e-19 100.9 156 45.5
COL.COLO4_27176 Corchorus olitorius HOM05D002105 ORTHO05D001271 1.4e-19 100.5 159 47.8
Aqoxy1G02397 Aquilegia oxysepala HOM05D002105 ORTHO05D001271 1.8e-19 100.1 159 46.5
BcaB03g12536 Brassica carinata HOM05D002105 ORTHO05D001271 1.8e-19 100.1 161 46.6
Prupe.4G180600 Prunus persica HOM05D002105 ORTHO05D001271 1.8e-19 100.1 153 48.4
BcaNung07240 Brassica carinata HOM05D002105 ORTHO05D001271 2.4e-19 99.8 158 44.9
Carub.0007s1335 Capsella rubella HOM05D002105 ORTHO05D001271 2.4e-19 99.8 161 46.6
ATR0737G090 Amborella trichopoda HOM05D002105 ORTHO05D001271 3.1e-19 99.4 158 47.5
Dinv00351 Davidia involucrata HOM05D002105 ORTHO05D001271 3.1e-19 99.4 74 66.2
GSVIVG01014330001 Vitis vinifera HOM05D002105 ORTHO05D001271 3.1e-19 99.4 81 64.2
Glyma.13G276500 Glycine max HOM05D002105 ORTHO05D001271 4.1e-19 99.0 160 44.4
C08p10310 Brassica napus HOM05D002105 ORTHO05D001271 7.0e-19 98.2 161 45.3
BolC8t48712H Brassica oleracea HOM05D002105 ORTHO05D001271 7.0e-19 98.2 161 45.3
Lalb_Chr19g0134171 Lupinus albus HOM05D002105 ORTHO05D001271 1.6e-18 97.1 158 46.2
Sopen12g007180 Solanum pennellii HOM05D002105 ORTHO05D001271 1.6e-18 97.1 197 49.2
C01p23680 Brassica napus HOM05D002105 ORTHO05D001271 2.0e-18 96.7 156 44.2
BolC1t02320H Brassica oleracea HOM05D002105 ORTHO05D001271 2.0e-18 96.7 156 44.2
Gorai.002G069700 Gossypium raimondii HOM05D002105 ORTHO05D001271 2.0e-18 96.7 183 48.6
CDE08G0095 Ceratophyllum demersum HOM05D002105 ORTHO05D001271 3.5e-18 95.9 161 44.7
Lalb_Chr20g0109631 Lupinus albus HOM05D002105 ORTHO05D001271 3.5e-18 95.9 157 44.6
Lj3g0008045 Lotus japonicus HOM05D002105 ORTHO05D001271 4.5e-18 95.5 158 43.0
VMungo1127G2095 Vigna mungo HOM05D002105 ORTHO05D001271 5.9e-18 95.1 157 47.1
PGR083G2752 Punica granatum HOM05D002105 ORTHO05D001271 7.8e-18 94.7 159 44.7
A08p20450 Brassica napus HOM05D002105 ORTHO05D001271 1.0e-17 94.4 165 44.2
Sp6g15880 Schrenkiella parvula HOM05D002105 ORTHO05D001271 1.0e-17 94.4 156 44.2
AL7G25270 Arabidopsis lyrata HOM05D002105 ORTHO05D001271 1.7e-17 93.6 160 42.5
BraA08t34001Z Brassica rapa HOM05D002105 ORTHO05D001271 2.9e-17 92.8 165 45.5
Nitab4.5_0000207g0080 Nicotiana tabacum HOM05D002105 ORTHO05D001271 2.9e-17 92.8 133 52.6
BraA01t01818Z Brassica rapa HOM05D002105 ORTHO05D001271 5.0e-17 92.0 150 40.0
DCAR_020991 Daucus carota HOM05D002105 ORTHO05D001271 5.0e-17 92.0 181 49.2
Phvul.005G072500 Phaseolus vulgaris HOM05D002105 ORTHO05D001271 5.0e-17 92.0 157 40.1
Psat5g243840 Pisum sativum HOM05D002105 ORTHO05D001271 5.0e-17 92.0 157 43.9
TPR.G39006 Trifolium pratense HOM05D002105 ORTHO05D001271 8.6e-17 91.3 158 44.3
VMungo1080G0407 Vigna mungo HOM05D002105 ORTHO05D001271 1.1e-16 90.9 157 42.0
Nitab4.5_0002383g0030 Nicotiana tabacum HOM05D002105 ORTHO05D001271 3.3e-16 89.4 143 45.5
CARHR235180 Cardamine hirsuta HOM05D002105 ORTHO05D001271 5.6e-16 88.6 151 43.0
HPP92_024062 Vanilla planifolia HOM05D002105 ORTHO05D001271 5.6e-16 88.6 154 43.5
A01p18720 Brassica napus HOM05D002105 ORTHO05D001271 7.3e-16 88.2 155 40.6
Nitab4.5_0009292g0010 Nicotiana tabacum HOM05D002105 ORTHO05D001271 7.3e-16 88.2 138 45.7
Sc03g0010070 Simmondsia chinensis HOM05D002105 ORTHO05D001271 7.3e-16 88.2 157 42.7
Lalb_Chr03g0030651 Lupinus albus HOM05D002105 ORTHO05D001271 1.6e-15 87.0 158 44.3
Cfa020580 Carpinus fangiana HOM05D002105 ORTHO05D001271 4.7e-15 85.5 133 48.1
Gorai.009G386900 Gossypium raimondii HOM05D002105 ORTHO05D001271 6.1e-15 85.1 142 40.8
Hund22838 Selenicereus undatus HOM05D002105 ORTHO05D001271 6.1e-15 85.1 138 44.9
Medtr2g085330 Medicago truncatula HOM05D002105 ORTHO05D001271 8.0e-15 84.7 158 44.9
Migut.M00803 Erythranthe guttata HOM05D002105 ORTHO05D001271 2.3e-14 83.2 169 42.6
TAR627G1018 Trochodendron aralioides HOM05D002105 ORTHO05D001271 2.3e-14 83.2 157 39.5
Ciclev10008004m.g Citrus clementina HOM05D002105 ORTHO05D001271 2.0e-13 80.1 156 41.7
THA.LOC104811864 Tarenaya hassleriana HOM05D002105 ORTHO05D001271 2.6e-13 79.7 158 40.5
SGA_v2.0_scaffold73G24261 Striga asiatica HOM05D002105 ORTHO05D001271 1.3e-12 77.4 163 42.3
Zm00001eb098450 Zea mays HOM05D002105 ORTHO05D001271 1.7e-12 77.0 158 43.0
HanXRQChr13g0389181 Helianthus annuus HOM05D002105 ORTHO05D001271 2.2e-12 76.6 157 38.2
HanXRQChr13g0389191 Helianthus annuus HOM05D002105 ORTHO05D001271 2.2e-12 76.6 157 38.2
ClCG11G018050 Citrullus lanatus HOM05D002105 ORTHO05D001271 2.9e-12 76.3 141 37.6
HPP92_028219 Vanilla planifolia HOM05D002105 ORTHO05D001271 6.4e-12 75.1 161 40.4
Zm00001eb310480 Zea mays HOM05D002105 ORTHO05D001271 6.4e-12 75.1 159 42.1
DCAR_019557 Daucus carota HOM05D002105 ORTHO05D001271 1.1e-11 74.3 164 35.4
Glyma.12G224800 Glycine max HOM05D002105 ORTHO05D001271 4.1e-11 72.4 165 37.6
C07p55520 Brassica napus HOM05D002105 ORTHO05D001271 5.4e-11 72.0 157 38.2
BolC7t46031H Brassica oleracea HOM05D002105 ORTHO05D001271 5.4e-11 72.0 157 38.2
Gohir.D05G355100 Gossypium hirsutum HOM05D002105 ORTHO05D001271 9.2e-11 71.2 151 39.7
Os09g0346400 Oryza sativa ssp. japonica HOM05D002105 ORTHO05D001271 1.2e-10 70.9 152 36.8
Os08g0390000 Oryza sativa ssp. japonica HOM05D002105 ORTHO05D001271 1.6e-10 70.5 149 36.9
CARHR090300 Cardamine hirsuta HOM05D002105 ORTHO05D001271 2.7e-10 69.7 159 35.8
Medtr4g132200 Medicago truncatula HOM05D002105 ORTHO05D001271 2.7e-10 69.7 157 40.1
unitig_747.g21573 Utricularia gibba HOM05D002105 ORTHO05D001271 3.5e-10 69.3 153 38.6
AUR62039203 Chenopodium quinoa HOM05D002105 ORTHO05D001271 4.6e-10 68.9 138 39.1
Gohir.D05G354300 Gossypium hirsutum HOM05D002105 ORTHO05D001271 4.6e-10 68.9 133 38.3
AT3G15340 Arabidopsis thaliana HOM05D002105 ORTHO05D001271 6.0e-10 68.6 157 34.4
BraA03t14798Z Brassica rapa HOM05D002105 ORTHO05D001271 7.8e-10 68.2 138 38.4
TAR671G0001 Trochodendron aralioides HOM05D002105 ORTHO05D001271 7.8e-10 68.2 132 36.4
BcaC06g32686 Brassica carinata HOM05D002105 ORTHO05D001271 1.7e-09 67.0 153 37.9
Carub.0003s1498 Capsella rubella HOM05D002105 ORTHO05D001271 3.0e-09 66.2 161 38.5
A03p57320 Brassica napus HOM05D002105 ORTHO05D001271 3.9e-09 65.9 116 38.8
Sp3g13520 Schrenkiella parvula HOM05D002105 ORTHO05D001271 8.6e-09 64.7 157 35.7
Lsat_1_v5_gn_9_97981 Lactuca sativa HOM05D002105 ORTHO05D001271 1.1e-08 64.3 43 65.1
Aa31LG3G10110 Aethionema arabicum HOM05D002105 ORTHO05D001271 3.3e-08 62.8 54 55.6
BcaC05g28994 Brassica carinata HOM05D002105 ORTHO05D001271 3.3e-08 62.8 162 35.2
C05p51900 Brassica napus HOM05D002105 ORTHO05D001271 3.3e-08 62.8 188 32.4
AUR62019432 Chenopodium quinoa HOM05D002105 ORTHO05D001271 3.3e-08 62.8 114 39.5
BcaC07g38286 Brassica carinata HOM05D002105 ORTHO05D012147 9.5e-08 61.2 129 42.6
THA.LOC104818081 Tarenaya hassleriana HOM05D002105 ORTHO05D001271 9.5e-08 61.2 148 37.8
RcHm_v2.0_Chr5g0033471 Rosa chinensis HOM05D002105 ORTHO05D001271 1.2e-07 60.8 131 38.2
BcaB06g29556 Brassica carinata HOM05D002105 ORTHO05D001271 1.6e-07 60.5 157 35.0
BraA05t22237Z Brassica rapa HOM05D002105 ORTHO05D001271 1.6e-07 60.5 188 33.0
Gorai.009G386800 Gossypium raimondii HOM05D002105 ORTHO05D001271 2.1e-07 60.1 161 35.4
AL3G27740 Arabidopsis lyrata HOM05D002105 ORTHO05D001271 2.8e-07 59.7 156 33.3
A05p34150 Brassica napus HOM05D002105 ORTHO05D001271 2.8e-07 59.7 188 31.9
VMungo0251G0735 Vigna mungo HOM05D002105 ORTHO05D001271 2.8e-07 59.7 149 40.3
Gorai.009G386100 Gossypium raimondii HOM05D002105 ORTHO05D001271 3.6e-07 59.3 149 34.2
AL7G45340 Arabidopsis lyrata HOM05D002105 ORTHO05D001271 1.4e-06 57.4 159 32.1
SEGI_21183 Sequoiadendron giganteum HOM05D002105 ORTHO05D001271 1.4e-06 57.4 169 34.3
SEGI_30217 Sequoiadendron giganteum HOM05D002105 ORTHO05D001271 1.4e-06 57.4 169 34.3
EL10Ac4g08186 Beta vulgaris HOM05D002105 ORTHO05D001271 3.1e-06 56.2 139 36.0


User provided reference genes

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