Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 1.5e-38 162.2 72 100.0
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 2.7e-35 151.4 71 91.5
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 2.7e-35 151.4 71 91.5
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 3.5e-35 151.0 71 90.1
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 1.8e-34 148.7 70 91.4
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 3.9e-34 147.5 71 88.7
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 5.1e-34 147.1 71 85.9
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 6.7e-34 146.7 71 85.9
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 6.7e-34 146.7 71 85.9
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 8.7e-34 146.4 71 85.9
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 8.7e-34 146.4 71 84.5
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 8.7e-34 146.4 71 84.5
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 1.1e-33 146.0 71 90.1
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 1.5e-33 145.6 72 87.5
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 1.5e-33 145.6 71 85.9
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 1.5e-33 145.6 71 88.7
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 1.9e-33 145.2 71 88.7
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.9e-33 145.2 70 87.1
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 3.3e-33 144.4 71 85.9
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 4.3e-33 144.1 71 85.9
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 7.4e-33 143.3 71 87.3
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 1.3e-32 142.5 71 87.3
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 2.1e-32 141.7 68 88.2
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 2.1e-32 141.7 66 92.4
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 2.1e-32 141.7 71 84.5
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.1e-32 141.7 71 84.5
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 2.1e-32 141.7 69 87.0
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 2.1e-32 141.7 69 87.0
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 2.1e-32 141.7 71 84.5
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 3.7e-32 141.0 71 84.5
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 4.8e-32 140.6 71 84.5
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 6.2e-32 140.2 71 85.9
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 6.2e-32 140.2 71 84.5
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 8.1e-32 139.8 71 83.1
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 8.1e-32 139.8 71 83.1
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 8.1e-32 139.8 71 83.1
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 8.1e-32 139.8 65 90.8
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 2.4e-31 138.3 70 84.3
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 2.4e-31 138.3 70 82.9
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 3.1e-31 137.9 66 87.9
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 3.1e-31 137.9 66 87.9
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 3.1e-31 137.9 66 87.9
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 3.1e-31 137.9 66 87.9
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 3.1e-31 137.9 66 87.9
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 3.1e-31 137.9 66 87.9
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 3.1e-31 137.9 66 87.9
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 3.1e-31 137.9 66 87.9
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 4.0e-31 137.5 69 85.5
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 4.0e-31 137.5 71 78.9
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 5.3e-31 137.1 71 83.1
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 5.3e-31 137.1 66 87.9
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 6.9e-31 136.7 70 81.4
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 9.0e-31 136.3 66 86.4
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 9.0e-31 136.3 71 78.9
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 9.0e-31 136.3 66 86.4
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 9.0e-31 136.3 71 80.3
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 9.0e-31 136.3 67 83.6
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 1.2e-30 136.0 71 80.3
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 1.2e-30 136.0 71 85.9
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 1.5e-30 135.6 69 79.7
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 1.5e-30 135.6 66 84.8
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.5e-30 135.6 71 81.7
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 2.6e-30 134.8 70 82.9
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 2.6e-30 134.8 76 78.9
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 3.4e-30 134.4 66 83.3
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 3.4e-30 134.4 71 81.7
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 3.4e-30 134.4 71 80.3
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 4.5e-30 134.0 66 84.8
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 1.0e-29 132.9 66 83.3
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 1.3e-29 132.5 71 77.5
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 1.3e-29 132.5 70 80.0
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 2.2e-29 131.7 74 79.7
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 2.2e-29 131.7 71 74.6
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 2.9e-29 131.3 71 77.5
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 3.8e-29 131.0 78 76.9
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 8.4e-29 129.8 64 84.4
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 9.3e-28 126.3 70 75.7
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 1.6e-27 125.6 66 77.3
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 2.7e-27 124.8 71 70.4
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 3.5e-27 124.4 64 82.8
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 7.9e-27 123.2 71 70.4
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 1.3e-26 122.5 70 78.6
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 2.3e-26 121.7 66 74.2
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 7.4e-25 116.7 58 84.5
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 3.7e-24 114.4 54 92.6
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 3.7e-24 114.4 73 69.9
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 6.2e-24 113.6 54 92.6
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 1.4e-23 112.5 54 88.9
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 1.4e-23 112.5 54 90.7
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 1.8e-23 112.1 54 85.2
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 3.1e-23 111.3 65 72.3
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 5.3e-23 110.5 54 90.7
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 6.9e-23 110.2 53 86.8
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 1.2e-22 109.4 65 76.9
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 3.8e-21 104.4 53 81.1
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 1.9e-20 102.1 63 61.9
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 1.0e-18 96.3 47 85.1
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 2.5e-17 91.7 60 56.7
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 2.8e-16 88.2 63 65.1
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 7.4e-09 63.5 34 76.5


User provided reference genes

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