Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007762.1 Olea europaea HOM05D004472 ORTHO05D007169 1.8e-259 898.7 443 100.0
MSTRG.6484 Avicennia marina HOM05D004472 ORTHO05D007169 1.3e-212 743.0 427 84.3
CSS0032720 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 8.4e-212 740.3 427 83.6
Dinv24072 Davidia involucrata HOM05D004472 ORTHO05D007169 2.4e-211 738.8 427 84.1
CSS0031939 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 6.0e-210 734.2 427 82.9
Hma1.2p1_0386F.1_g141865 Hydrangea macrophylla HOM05D004472 ORTHO05D007169 1.7e-209 732.6 427 82.7
Migut.J01839 Erythranthe guttata HOM05D004472 ORTHO05D007169 8.7e-209 730.3 433 80.4
Actinidia22035 Actinidia chinensis HOM05D004472 ORTHO05D007169 1.3e-207 726.5 429 81.6
GSVIVG01033498001 Vitis vinifera HOM05D004472 ORTHO05D007169 1.6e-207 726.1 427 81.7
SGA_v2.0_scaffold69G23061 Striga asiatica HOM05D004472 ORTHO05D007169 2.8e-207 725.3 432 80.6
Rhsim03G0006000 Rhododendron simsii HOM05D004472 ORTHO05D007169 4.5e-205 718.0 414 82.6
CAN.G273.20 Capsicum annuum HOM05D004472 ORTHO05D007169 5.8e-205 717.6 426 80.3
Sopen03g016030 Solanum pennellii HOM05D004472 ORTHO05D007169 1.3e-204 716.5 431 80.5
Solyc03g063340.3 Solanum lycopersicum HOM05D004472 ORTHO05D007169 5.4e-203 711.1 421 81.5
Prupe.7G076900 Prunus persica HOM05D004472 ORTHO05D007169 6.0e-202 707.6 427 80.3
TAR623G1736 Trochodendron aralioides HOM05D004472 ORTHO05D007169 1.0e-201 706.8 427 79.6
CiPaw.10G026500 Carya illinoinensis HOM05D004472 ORTHO05D007169 2.5e-200 702.2 427 78.7
Nitab4.5_0001137g0080 Nicotiana tabacum HOM05D004472 ORTHO05D007169 9.6e-200 700.3 442 76.7
Cpa.g.sc85.67 Carica papaya HOM05D004472 ORTHO05D007169 2.8e-199 698.7 427 78.5
Gohir.A04G055778 Gossypium hirsutum HOM05D004472 ORTHO05D007169 4.8e-199 698.0 427 78.9
Lj2C366G13 Lonicera japonica HOM05D004472 ORTHO05D007169 6.2e-199 697.6 422 79.9
QL07p023729 Quercus lobata HOM05D004472 ORTHO05D007169 8.1e-199 697.2 427 78.0
Ca_08520_v3 Cicer arietinum L. HOM05D004472 ORTHO05D007169 1.5e-197 693.0 418 78.7
COL.COLO4_33983 Corchorus olitorius HOM05D004472 ORTHO05D007169 1.5e-197 693.0 427 78.2
Glyma.03G144600 Glycine max HOM05D004472 ORTHO05D007169 5.8e-197 691.0 418 78.2
Gorai.012G101400 Gossypium raimondii HOM05D004472 ORTHO05D007169 1.7e-196 689.5 427 78.0
Nn3g18269 Nelumbo nucifera HOM05D004472 ORTHO05D007169 1.7e-196 689.5 427 78.2
MD14G1057800 Malus domestica HOM05D004472 ORTHO05D007169 2.2e-196 689.1 427 78.2
arahy.Tifrunner.gnm1.ann1.VM941Y Arachis hypogaea HOM05D004472 ORTHO05D007169 2.9e-196 688.7 427 77.3
ECA248G2191 Erigeron canadensis HOM05D004472 ORTHO05D007169 2.9e-196 688.7 425 77.9
THA.LOC104824475 Tarenaya hassleriana HOM05D004472 ORTHO05D007169 2.9e-196 688.7 428 76.4
Atru.chr8.1111 Acer truncatum HOM05D004472 ORTHO05D007169 3.8e-196 688.3 427 76.8
arahy.Tifrunner.gnm1.ann1.W50LA9 Arachis hypogaea HOM05D004472 ORTHO05D007169 8.4e-196 687.2 427 77.3
TPR.G18209 Trifolium pratense HOM05D004472 ORTHO05D007169 8.4e-196 687.2 418 77.3
CANSAT64G0932 Cannabis sativa HOM05D004472 ORTHO05D007169 1.1e-195 686.8 428 78.3
Manes.08G044600 Manihot esculenta HOM05D004472 ORTHO05D007169 1.1e-195 686.8 431 77.0
Gohir.D04G090500 Gossypium hirsutum HOM05D004472 ORTHO05D007169 1.9e-195 686.0 427 77.8
CsaV3_3G038830 Cucumis sativus L. HOM05D004472 ORTHO05D007169 2.5e-195 685.6 427 76.3
Glyma.19G147500 Glycine max HOM05D004472 ORTHO05D007169 2.5e-195 685.6 418 77.5
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 3.2e-195 685.3 423 76.8
AT2G42120 Arabidopsis thaliana HOM05D004472 ORTHO05D007169 9.3e-195 683.7 427 76.1
HanXRQChr13g0390871 Helianthus annuus HOM05D004472 ORTHO05D007169 2.1e-194 682.6 431 77.0
MD12G1057200 Malus domestica HOM05D004472 ORTHO05D007169 2.1e-194 682.6 427 78.0
Hund19203 Selenicereus undatus HOM05D004472 ORTHO05D007169 2.1e-194 682.6 424 77.4
BcaB06g29226 Brassica carinata HOM05D004472 ORTHO05D007169 1.0e-193 680.2 427 75.4
Medtr7g093210 Medicago truncatula HOM05D004472 ORTHO05D007169 1.8e-193 679.5 417 77.0
Sc25g0005090 Simmondsia chinensis HOM05D004472 ORTHO05D007169 2.3e-193 679.1 446 73.8
Lj1g0006426 Lotus japonicus HOM05D004472 ORTHO05D007169 3.9e-193 678.3 420 76.9
RcHm_v2.0_Chr3g0479691 Rosa chinensis HOM05D004472 ORTHO05D007169 3.9e-193 678.3 427 76.6
Eucgr.K01838 Eucalyptus grandis HOM05D004472 ORTHO05D007169 6.7e-193 677.6 429 76.0
Thhalv10016664m.g Eutrema salsugineum HOM05D004472 ORTHO05D007169 1.1e-192 676.8 428 75.5
TWI77G0336 Tripterygium wilfordii HOM05D004472 ORTHO05D007169 2.5e-192 675.6 427 75.2
AL4G40490 Arabidopsis lyrata HOM05D004472 ORTHO05D007169 3.3e-192 675.2 428 75.5
Psat3g068520 Pisum sativum HOM05D004472 ORTHO05D007169 3.3e-192 675.2 414 76.3
Phvul.001G143200 Phaseolus vulgaris HOM05D004472 ORTHO05D007169 5.6e-192 674.5 418 76.3
Lsat_1_v5_gn_5_163440 Lactuca sativa HOM05D004472 ORTHO05D007169 9.6e-192 673.7 424 75.7
PGR142G1378 Punica granatum HOM05D004472 ORTHO05D007169 2.1e-191 672.5 429 74.6
A04p32010 Brassica napus HOM05D004472 ORTHO05D007169 2.8e-191 672.2 430 75.1
Nitab4.5_0007619g0020 Nicotiana tabacum HOM05D004472 ORTHO05D007169 3.7e-191 671.8 421 77.0
BraA04t18658Z Brassica rapa HOM05D004472 ORTHO05D007169 8.2e-191 670.6 428 75.5
FvH4_6g22330 Fragaria vesca HOM05D004472 ORTHO05D007169 8.2e-191 670.6 428 74.5
Sp4g24330 Schrenkiella parvula HOM05D004472 ORTHO05D007169 8.2e-191 670.6 428 74.5
Lalb_Chr15g0079011 Lupinus albus HOM05D004472 ORTHO05D007169 1.8e-190 669.5 419 74.5
BcaC02g07263 Brassica carinata HOM05D004472 ORTHO05D007169 4.0e-190 668.3 429 75.3
C04p69510 Brassica napus HOM05D004472 ORTHO05D007169 4.0e-190 668.3 428 75.0
Aa31LG1G24100 Aethionema arabicum HOM05D004472 ORTHO05D007169 2.0e-189 666.0 434 73.5
Potri.016G045800 Populus trichocarpa HOM05D004472 ORTHO05D007169 4.5e-189 664.8 429 75.3
BolC4t28450H Brassica oleracea HOM05D004472 ORTHO05D007169 1.0e-188 663.7 429 74.8
TWI74G0546 Tripterygium wilfordii HOM05D004472 ORTHO05D007169 1.7e-188 662.9 427 73.8
CSS0048424 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 2.2e-188 662.5 441 75.3
Sabra16G0049800 Salix brachista HOM05D004472 ORTHO05D007169 4.9e-188 661.4 429 75.1
FAN14G1969 Fragaria x ananassa HOM05D004472 ORTHO05D007169 1.1e-187 660.2 441 72.3
EL10Ac3g06916 Beta vulgaris HOM05D004472 ORTHO05D007169 5.5e-187 657.9 427 72.6
Potri.006G192400 Populus trichocarpa HOM05D004472 ORTHO05D007169 1.2e-186 656.8 427 74.5
PSO339G4742 Papaver somniferum HOM05D004472 ORTHO05D007169 2.1e-186 656.0 428 74.3
Aqoxy1G00476 Aquilegia oxysepala HOM05D004472 ORTHO05D007169 3.5e-186 655.2 432 71.8
Sed0018995 Sechium edule HOM05D004472 ORTHO05D007169 3.5e-186 655.2 427 72.6
vmacro07908 Vaccinium macrocarpon HOM05D004472 ORTHO05D007169 1.3e-185 653.3 473 69.8
VMungo1383G3660 Vigna mungo HOM05D004472 ORTHO05D007169 2.3e-185 652.5 407 75.9
Carub.0004s2446 Capsella rubella HOM05D004472 ORTHO05D007169 5.1e-185 651.4 428 73.8
Sabra06G0147500 Salix brachista HOM05D004472 ORTHO05D007169 3.3e-184 648.7 427 73.3
FAN05G5703 Fragaria x ananassa HOM05D004472 ORTHO05D007169 1.3e-183 646.7 428 73.1
PSO384G4825 Papaver somniferum HOM05D004472 ORTHO05D007169 2.2e-183 646.0 428 73.4
Thecc.05G171300 Theobroma cacao HOM05D004472 ORTHO05D007169 2.8e-183 645.6 382 80.1
Phvul.001G142200 Phaseolus vulgaris HOM05D004472 ORTHO05D007169 6.3e-183 644.4 418 73.2
FAN02G0232 Fragaria x ananassa HOM05D004472 ORTHO05D007169 1.4e-182 643.3 436 71.6
FAN09G4048 Fragaria x ananassa HOM05D004472 ORTHO05D007169 7.2e-179 630.9 438 70.5
SalBow6G5437 Salvia bowleyana HOM05D004472 ORTHO05D007169 1.2e-178 630.2 421 73.9
Ah.13g075820 Amaranthus hybridus HOM05D004472 ORTHO05D007169 2.3e-177 625.9 408 73.3
Os03g0128500 Oryza sativa ssp. japonica HOM05D004472 ORTHO05D007169 2.3e-177 625.9 422 70.1
Zm00001eb002170 Zea mays HOM05D004472 ORTHO05D007169 9.7e-176 620.5 422 70.1
Haze_19988 Corylus avellana HOM05D004472 ORTHO05D007169 1.5e-173 613.2 472 65.7
HPP92_018591 Vanilla planifolia HOM05D004472 ORTHO05D007169 7.2e-171 604.4 424 67.5
PGSC0003DMG400014974 Solanum tuberosum HOM05D004472 ORTHO05D007169 3.9e-169 598.6 356 81.7
SEGI_25790 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 5.7e-168 594.7 429 65.7
CDE04G2547 Ceratophyllum demersum HOM05D004472 ORTHO05D007169 2.0e-165 586.3 394 71.3
Haze_19990 Corylus avellana HOM05D004472 ORTHO05D007169 4.5e-165 585.1 444 67.1
HPP92_006516 Vanilla planifolia HOM05D004472 ORTHO05D007169 3.2e-163 578.9 469 61.2
ClCG10G017520 Citrullus lanatus HOM05D004472 ORTHO05D007169 3.6e-162 575.5 436 65.8
Sed0005670 Sechium edule HOM05D004472 ORTHO05D007169 5.2e-161 571.6 365 76.2
MELO3C030998.2 Cucumis melo HOM05D004472 ORTHO05D007169 1.3e-156 557.0 507 58.2
ATR0807G137 Amborella trichopoda HOM05D004472 ORTHO05D007169 7.2e-155 551.2 375 70.1
Duzib128G1617 Durio zibethinus HOM05D004472 ORTHO05D007169 4.4e-152 542.0 427 64.9
Pp3c3_28090 Physcomitrium patens HOM05D004472 ORTHO05D007169 3.5e-149 532.3 430 58.4
Mapoly0039s0092 Marchantia polymorpha HOM05D004472 ORTHO05D007169 3.0e-145 519.2 428 58.9
AagrBONN_evm.TU.Sc2ySwM_362.678 Anthoceros agrestis HOM05D004472 ORTHO05D007169 2.0e-144 516.5 423 60.5
AUR62015368 Chenopodium quinoa HOM05D004472 ORTHO05D007169 1.1e-142 510.8 427 60.9
AUR62012036 Chenopodium quinoa HOM05D004472 ORTHO05D007169 4.1e-142 508.8 422 60.7
SMO111G0006 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 5.4e-142 508.4 427 57.4
Aqoxy2G02978 Aquilegia oxysepala HOM05D004472 ORTHO05D007169 3.3e-139 499.2 459 55.8
SMO339G0063 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 2.3e-137 493.0 430 54.9
CBR_g38861 Chara braunii HOM05D004472 ORTHO05D000002 3.6e-130 469.2 429 53.1
CBR_g63079 Chara braunii HOM05D004472 ORTHO05D007169 2.5e-123 446.4 415 52.5
CARHR137180 Cardamine hirsuta HOM05D004472 ORTHO05D007169 1.6e-114 417.2 258 76.0
MBI06_g29494_MAGBIO Magnolia biondii HOM05D004472 ORTHO05D007169 8.9e-113 411.4 248 77.4
Ciclev10012551m.g Citrus clementina HOM05D004472 ORTHO05D007169 3.8e-103 379.4 244 75.8
Peaxi162Scf00258g00730 Petunia axillaris HOM05D004472 ORTHO05D007169 4.0e-97 359.4 244 74.6
PRCOL_00001477 Prasinoderma coloniale HOM05D004472 ORTHO05D007169 3.2e-94 349.7 373 44.8
MCO03G010 Micromonas commoda HOM05D004472 ORTHO05D007169 6.6e-92 342.0 439 42.4
SHI42174 Sapria himalayana HOM05D004472 ORTHO05D007169 7.3e-91 338.6 256 67.6
Hma1.2p1_0386F.1_g141870 Hydrangea macrophylla HOM05D004472 ORTHO05D007169 4.5e-88 329.3 183 83.6
Cre08.g374050 Chlamydomonas reinhardtii HOM05D004472 ORTHO05D007169 3.2e-86 323.2 516 36.6
Ciclev10012767m.g Citrus clementina HOM05D004472 ORTHO05D007169 5.4e-86 322.4 184 79.9
MBI06_g29491_MAGBIO Magnolia biondii HOM05D004472 ORTHO05D007169 5.0e-63 246.1 176 69.9
SHI33668 Sapria himalayana HOM05D004472 ORTHO05D007169 1.8e-60 237.7 197 61.9
SEGI_31079 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 1.5e-51 208.0 169 58.6
Lsat_1_v5_gn_5_163500 Lactuca sativa HOM05D004472 ORTHO05D007169 2.8e-50 203.8 184 58.7
Haze_26548 Corylus avellana HOM05D005705 ORTHO05D007152 6.5e-47 192.6 419 32.0
BcaNung04407 Brassica carinata HOM05D004472 ORTHO05D007169 1.5e-43 181.4 232 44.4
BcaNung06765 Brassica carinata HOM05D004472 ORTHO05D027254 2.2e-42 177.6 145 60.0
BcaC04g21709 Brassica carinata HOM05D004472 ORTHO05D013781 6.3e-42 176.0 152 58.6
BcaC03g16493 Brassica carinata HOM05D004472 ORTHO05D013781 9.1e-41 172.2 187 49.2
A02p27200 Brassica napus HOM05D004472 ORTHO05D013781 2.5e-38 164.1 103 68.0
SEGI_39608 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 9.4e-38 162.2 132 58.3
Peaxi162Scf00258g00729 Petunia axillaris HOM05D004472 ORTHO05D007169 2.3e-36 157.5 81 82.7
BcaB02g11100 Brassica carinata HOM05D004472 ORTHO05D027254 3.5e-32 143.7 145 51.7
BolC9t55720H Brassica oleracea HOM05D004472 ORTHO05D013781 1.9e-30 137.9 88 69.3
BcaC01g04270 Brassica carinata HOM05D004472 ORTHO05D013781 2.5e-30 137.5 125 56.0
A09p46770 Brassica napus HOM05D004472 ORTHO05D013781 3.2e-30 137.1 86 69.8
BcaC02g12460 Brassica carinata HOM05D004472 ORTHO05D013781 1.7e-26 124.8 129 52.7
BcaNung00145 Brassica carinata HOM05D004472 ORTHO05D013781 7.7e-24 115.9 122 50.0
SEGI_06501 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 9.5e-22 109.0 96 55.2
BcaC05g24672 Brassica carinata HOM05D004472 ORTHO05D027254 1.2e-21 108.6 126 47.6
CARHR228030 Cardamine hirsuta HOM05D004472 ORTHO05D039758 8.3e-18 95.9 67 70.1
C03p43020 Brassica napus HOM05D004472 ORTHO05D013781 3.0e-15 87.4 58 65.5
BcaB02g11125 Brassica carinata HOM05D004472 ORTHO05D039758 7.3e-14 82.8 65 64.6
CARHR228020 Cardamine hirsuta HOM05D004472 ORTHO05D007169 3.4e-11 73.9 70 51.4
SMO364G0765 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 3.4e-11 73.9 45 73.3
BolC3t16570H Brassica oleracea HOM05D004472 ORTHO05D013781 4.9e-10 70.1 55 61.8
BraA07t27940Z Brassica rapa HOM05D004472 ORTHO05D013781 4.9e-10 70.1 55 61.8
BraA06t25637Z Brassica rapa HOM05D004472 ORTHO05D013781 1.1e-09 68.9 53 62.3
BcaB06g25539 Brassica carinata HOM05D004472 ORTHO05D094557 1.6e-08 65.1 82 43.9
BraA08t32859Z Brassica rapa HOM05D004472 ORTHO05D027254 7.8e-08 62.8 51 60.8
CARHR241940 Cardamine hirsuta HOM05D004472 ORTHO05D007169 3.9e-07 60.5 35 74.3


User provided reference genes

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