Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 1.2e-43 179.5 94 100.0
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 1.7e-29 132.5 94 77.7
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 3.2e-28 128.3 93 72.0
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 1.8e-26 122.5 92 68.5
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 3.3e-25 118.2 92 66.3
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 3.7e-24 114.8 95 65.3
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 8.2e-24 113.6 95 65.3
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 8.2e-24 113.6 95 65.3
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 8.2e-24 113.6 109 56.9
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 1.1e-23 113.2 87 66.7
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 3.1e-23 111.7 91 62.6
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 3.1e-23 111.7 87 65.5
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 5.3e-23 110.9 87 65.5
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 9.0e-23 110.2 95 66.3
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 9.0e-23 110.2 94 64.9
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 1.2e-22 109.8 93 63.4
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 2.0e-22 109.0 93 62.4
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 2.0e-22 109.0 93 62.4
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 3.4e-22 108.2 95 65.3
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 2.9e-21 105.1 92 64.1
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 2.9e-21 105.1 96 61.5
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 3.8e-21 104.8 91 64.8
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 6.5e-21 104.0 95 65.3
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 6.5e-21 104.0 91 60.4
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 8.4e-21 103.6 92 63.0
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 1.1e-20 103.2 92 62.0
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 1.9e-20 102.4 91 59.3
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 2.5e-20 102.1 95 61.1
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 3.2e-20 101.7 96 66.7
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 4.2e-20 101.3 95 65.3
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 7.1e-20 100.5 95 66.3
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 9.3e-20 100.1 95 60.0
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 1.2e-19 99.8 95 62.1
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 1.6e-19 99.4 95 63.2
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 2.1e-19 99.0 93 63.4
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 2.7e-19 98.6 95 63.2
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 4.6e-19 97.8 95 63.2
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 4.6e-19 97.8 95 63.2
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 4.6e-19 97.8 95 62.1
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 4.6e-19 97.8 91 60.4
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.8e-18 95.9 93 62.4
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 1.8e-18 95.9 91 58.2
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 1.8e-18 95.9 91 60.4
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 1.8e-18 95.9 92 60.9
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 2.3e-18 95.5 93 58.1
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 2.3e-18 95.5 93 58.1
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 2.3e-18 95.5 93 58.1
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 2.3e-18 95.5 93 58.1
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 2.3e-18 95.5 93 58.1
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 2.3e-18 95.5 93 58.1
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 2.3e-18 95.5 92 60.9
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 2.3e-18 95.5 58 84.5
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 3.9e-18 94.7 94 61.7
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 6.7e-18 94.0 91 57.1
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 6.7e-18 94.0 95 55.8
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 8.7e-18 93.6 69 71.0
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 8.7e-18 93.6 92 57.6
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 1.1e-17 93.2 93 62.4
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 1.1e-17 93.2 92 58.7
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 1.1e-17 93.2 95 58.9
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 1.5e-17 92.8 92 55.4
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.5e-17 92.8 94 60.6
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 1.5e-17 92.8 92 56.5
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 1.9e-17 92.4 91 54.9
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 1.9e-17 92.4 68 69.1
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 2.5e-17 92.0 89 57.3
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 3.3e-17 91.7 97 58.8
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 5.7e-17 90.9 92 56.5
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 5.7e-17 90.9 91 54.9
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 7.4e-17 90.5 92 55.4
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 7.4e-17 90.5 58 75.9
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 7.4e-17 90.5 99 55.6
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 7.4e-17 90.5 93 55.9
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 7.4e-17 90.5 94 57.4
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 7.4e-17 90.5 91 57.1
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 9.7e-17 90.1 91 57.1
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 1.3e-16 89.7 94 58.5
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 1.3e-16 89.7 62 71.0
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 1.6e-16 89.4 92 55.4
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 2.2e-16 89.0 93 59.1
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 2.8e-16 88.6 97 55.7
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 2.8e-16 88.6 91 56.0
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 3.7e-16 88.2 91 57.1
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 4.8e-16 87.8 93 54.8
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 8.2e-16 87.0 68 66.2
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 1.1e-15 86.7 89 53.9
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 3.1e-15 85.1 92 52.2
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 4.1e-15 84.7 96 55.2
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 6.9e-15 84.0 90 50.0
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 9.0e-15 83.6 92 52.2
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 1.2e-14 83.2 90 56.7
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 2.0e-14 82.4 92 48.9
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 2.0e-14 82.4 96 54.2
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 2.0e-14 82.4 92 57.6
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 5.9e-14 80.9 94 54.3
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 7.7e-14 80.5 93 50.5
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 1.3e-13 79.7 93 49.5
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 6.5e-13 77.4 94 48.9
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 1.4e-12 76.3 93 48.4
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 2.5e-12 75.5 46 80.4
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 3.2e-12 75.1 94 44.7
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.0e-10 70.1 43 79.1
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 1.1e-09 66.6 57 56.1
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.0e-09 65.9 76 46.1
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.0e-09 65.9 76 46.1
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 2.0e-09 65.9 69 47.8
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.5e-09 65.5 57 56.1
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.5e-09 65.5 57 56.1
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 2.5e-09 65.5 57 56.1
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 4.3e-09 64.7 57 54.4
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 1.7e-08 62.8 63 49.2
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 6.3e-08 60.8 55 50.9


User provided reference genes

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