Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007503.1 Olea europaea HOM05D006405 ORTHO05D007943 5.8e-59 231.1 156 100.0
MSTRG.10623 Avicennia marina HOM05D006405 ORTHO05D007943 3.3e-22 109.0 155 45.8
Migut.K00484 Erythranthe guttata HOM05D006405 ORTHO05D007943 7.4e-14 81.3 66 63.6
unitig_746.g26583 Utricularia gibba HOM05D000723 ORTHO05D002918 3.5e-11 72.4 83 53.0
SGA_v2.0_scaffold17G08036 Striga asiatica HOM05D006405 ORTHO05D007943 7.7e-11 71.2 151 42.4
GSVIVG01015463001 Vitis vinifera HOM05D006405 ORTHO05D007943 1.7e-10 70.1 53 69.8
CSS0000400 Camellia sinensis var. sinensis HOM05D006405 ORTHO05D007943 5.0e-10 68.6 46 80.4
CSS0009020 Camellia sinensis var. sinensis HOM05D006405 ORTHO05D007943 5.0e-10 68.6 46 80.4
Nn8g39326 Nelumbo nucifera HOM05D006405 ORTHO05D007943 5.5e-09 65.1 60 58.3
Dinv41556 Davidia involucrata HOM05D006405 ORTHO05D007943 7.2e-09 64.7 40 80.0
Rhsim01G0089400 Rhododendron simsii HOM05D006405 ORTHO05D007943 2.7e-08 62.8 73 57.5
vmacro20684 Vaccinium macrocarpon HOM05D006405 ORTHO05D007943 2.7e-08 62.8 39 82.1
vmacro23165 Vaccinium macrocarpon HOM05D006405 ORTHO05D007943 2.7e-08 62.8 39 82.1
vmacro23455 Vaccinium macrocarpon HOM05D006405 ORTHO05D007943 2.7e-08 62.8 39 82.1
MD02G1039700 Malus domestica HOM05D006405 ORTHO05D007943 3.6e-08 62.4 59 61.0
TWI32G1134 Tripterygium wilfordii HOM05D006405 ORTHO05D007943 3.6e-08 62.4 51 64.7
DCAR_017855 Daucus carota HOM05D006405 ORTHO05D007943 8.0e-08 61.2 82 48.8
TAR636G3075 Trochodendron aralioides HOM05D006405 ORTHO05D007943 8.0e-08 61.2 46 63.0
Gohir.D05G021700 Gossypium hirsutum HOM05D006405 ORTHO05D007943 1.0e-07 60.8 82 50.0
Manes.14G127600 Manihot esculenta HOM05D006405 ORTHO05D007943 1.0e-07 60.8 48 64.6
Nn2g11875 Nelumbo nucifera HOM05D006405 ORTHO05D007943 1.0e-07 60.8 45 71.1
Nitab4.5_0001719g0050 Nicotiana tabacum HOM05D006405 ORTHO05D007943 1.0e-07 60.8 153 46.4
RcHm_v2.0_Chr2g0089591 Rosa chinensis HOM05D006405 ORTHO05D007943 1.0e-07 60.8 83 53.0
Nitab4.5_0000432g0020 Nicotiana tabacum HOM05D006405 ORTHO05D007943 1.8e-07 60.1 154 48.7
MBI04_g43150_MAGBIO Magnolia biondii HOM05D006405 ORTHO05D007943 2.3e-07 59.7 40 72.5
Lsat_1_v5_gn_7_42660 Lactuca sativa HOM05D006405 ORTHO05D007943 5.2e-07 58.5 59 61.0
EL10Ac8g18573 Beta vulgaris HOM05D006405 ORTHO05D007943 1.2e-06 57.4 50 70.0
Haze_25659 Corylus avellana HOM05D006405 ORTHO05D007943 1.2e-06 57.4 53 60.4
CDE01G0658 Ceratophyllum demersum HOM05D006405 ORTHO05D007943 1.5e-06 57.0 34 76.5
PGR142G3933 Punica granatum HOM05D006405 ORTHO05D007943 1.5e-06 57.0 82 43.9
Aqoxy7G01949 Aquilegia oxysepala HOM05D006405 ORTHO05D007943 2.0e-06 56.6 43 65.1
CiPaw.03G237400 Carya illinoinensis HOM05D006405 ORTHO05D007943 2.6e-06 56.2 69 49.3
FAN19G2606 Fragaria x ananassa HOM05D006405 ORTHO05D007943 2.6e-06 56.2 105 43.8
Gohir.A05G020600 Gossypium hirsutum HOM05D006405 ORTHO05D007943 2.6e-06 56.2 82 47.6
Gorai.009G022000 Gossypium raimondii HOM05D006405 ORTHO05D007943 2.6e-06 56.2 82 47.6
MD15G1180600 Malus domestica HOM05D006405 ORTHO05D007943 2.6e-06 56.2 43 65.1
Lalb_Chr23g0275181 Lupinus albus HOM05D006405 ORTHO05D007943 3.3e-06 55.8 63 52.4
MBI04_g46125_MAGBIO Magnolia biondii HOM05D006405 ORTHO05D007943 3.3e-06 55.8 36 75.0
FAN23G2044 Fragaria x ananassa HOM05D006405 ORTHO05D007943 4.4e-06 55.5 104 41.3
Prupe.7G236000 Prunus persica HOM05D006405 ORTHO05D007943 4.4e-06 55.5 75 46.7
Hund09164 Selenicereus undatus HOM05D006405 ORTHO05D007943 7.5e-06 54.7 48 66.7
FvH4_1g04120 Fragaria vesca HOM05D006405 ORTHO05D007943 9.7e-06 54.3 91 44.0


User provided reference genes

Program Settings