Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007486.1 Olea europaea HOM05D000076 ORTHO05D287714 4.7e-42 174.1 86 100.0
Oeu056210.2 Olea europaea HOM05D000076 ORTHO05D001150 3.7e-15 84.7 74 52.7
Dinv31934 Davidia involucrata HOM05D000076 ORTHO05D001150 5.9e-13 77.4 72 54.2
Ca_15437_v3 Cicer arietinum L. HOM05D000076 ORTHO05D001150 2.3e-12 75.5 73 53.4
CSS0027873 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D001150 5.0e-12 74.3 75 56.0
COL.COLO4_04003 Corchorus olitorius HOM05D000076 ORTHO05D001150 5.0e-12 74.3 75 45.3
Thecc.08G058100 Theobroma cacao HOM05D000076 ORTHO05D001150 8.6e-12 73.6 75 48.0
THA.LOC104811460 Tarenaya hassleriana HOM05D000076 ORTHO05D001150 3.3e-11 71.6 73 50.7
Psat5g011480 Pisum sativum HOM05D000076 ORTHO05D001150 4.2e-11 71.2 79 49.4
Glyma.04G018300 Glycine max HOM05D000076 ORTHO05D001150 5.5e-11 70.9 73 47.9
Ciclev10000708m.g Citrus clementina HOM05D000076 ORTHO05D001150 7.2e-11 70.5 74 51.4
Gorai.005G113300 Gossypium raimondii HOM05D000076 ORTHO05D001150 7.2e-11 70.5 80 45.0
arahy.Tifrunner.gnm1.ann1.CHY7BE Arachis hypogaea HOM05D000076 ORTHO05D001150 9.5e-11 70.1 79 53.2
Phvul.009G010300 Phaseolus vulgaris HOM05D000076 ORTHO05D001150 9.5e-11 70.1 73 46.6
arahy.Tifrunner.gnm1.ann1.2HZ4K3 Arachis hypogaea HOM05D000076 ORTHO05D001150 1.6e-10 69.3 79 53.2
arahy.Tifrunner.gnm1.ann1.ZGF4SU Arachis hypogaea HOM05D000076 ORTHO05D001150 1.6e-10 69.3 79 53.2
Duzib093G1909 Durio zibethinus HOM05D000076 ORTHO05D001150 1.6e-10 69.3 75 46.7
Medtr3g115220 Medicago truncatula HOM05D000076 ORTHO05D001150 1.6e-10 69.3 73 50.7
SGA_v2.0_scaffold275G46599 Striga asiatica HOM05D000076 ORTHO05D001150 1.6e-10 69.3 81 53.1
Cpa.g.sc26.204 Carica papaya HOM05D000076 ORTHO05D001150 2.1e-10 68.9 81 44.4
Hma1.2p1_0507F.1_g168420 Hydrangea macrophylla HOM05D000076 ORTHO05D001150 2.1e-10 68.9 73 52.1
Manes.05G134800 Manihot esculenta HOM05D000076 ORTHO05D001150 2.1e-10 68.9 73 49.3
Cfa014065 Carpinus fangiana HOM05D000076 ORTHO05D001150 3.6e-10 68.2 73 49.3
RhsimUnG0172100 Rhododendron simsii HOM05D000076 ORTHO05D001150 4.7e-10 67.8 81 53.1
Duzib116G0386 Durio zibethinus HOM05D000076 ORTHO05D001150 6.1e-10 67.4 75 45.3
Rhsim01G0045100 Rhododendron simsii HOM05D000076 ORTHO05D001150 8.0e-10 67.0 81 51.9
Oeu011331.1 Olea europaea HOM05D000076 ORTHO05D001150 1.4e-09 66.2 77 53.2
Gohir.D01G092900 Gossypium hirsutum HOM05D000076 ORTHO05D001150 1.8e-09 65.9 75 46.7
vmacro04402 Vaccinium macrocarpon HOM05D000076 ORTHO05D001150 2.3e-09 65.5 70 57.1
PGR083G2806 Punica granatum HOM05D000076 ORTHO05D001150 3.0e-09 65.1 74 50.0
Migut.C00956 Erythranthe guttata HOM05D000076 ORTHO05D001150 4.0e-09 64.7 78 47.4
Gorai.002G118200 Gossypium raimondii HOM05D000076 ORTHO05D001150 4.0e-09 64.7 75 45.3
SalBow7G0547 Salvia bowleyana HOM05D000076 ORTHO05D001150 4.0e-09 64.7 75 53.3
Lj1g0024180 Lotus japonicus HOM05D000076 ORTHO05D001150 5.2e-09 64.3 83 47.0
MSTRG.1109 Avicennia marina HOM05D000076 ORTHO05D001150 6.8e-09 63.9 73 49.3
Haze_22760 Corylus avellana HOM05D000076 ORTHO05D001150 6.8e-09 63.9 73 50.7
Gohir.A01G106400 Gossypium hirsutum HOM05D000076 ORTHO05D001150 6.8e-09 63.9 63 47.6
Lj6A3T38 Lonicera japonica HOM05D000076 ORTHO05D001150 2.0e-08 62.4 50 62.0
Rhsim07G0254800 Rhododendron simsii HOM05D000076 ORTHO05D001150 2.0e-08 62.4 72 54.2
VMungo1309G0012 Vigna mungo HOM05D000076 ORTHO05D001150 2.0e-08 62.4 73 43.8
Glyma.06G018600 Glycine max HOM05D000076 ORTHO05D001150 2.6e-08 62.0 73 43.8
Peaxi162Scf00064g01133 Petunia axillaris HOM05D000076 ORTHO05D001150 2.6e-08 62.0 53 62.3
CiPaw.07G139300 Carya illinoinensis HOM05D000076 ORTHO05D001150 5.7e-08 60.8 73 47.9
QL02p013992 Quercus lobata HOM05D000076 ORTHO05D001150 5.7e-08 60.8 73 46.6
THA.LOC104813756 Tarenaya hassleriana HOM05D000076 ORTHO05D001150 7.5e-08 60.5 73 46.6
Lsat_1_v5_gn_9_45061 Lactuca sativa HOM05D000076 ORTHO05D001150 2.8e-07 58.5 73 49.3
Gohir.A02G084000 Gossypium hirsutum HOM05D000076 ORTHO05D001150 4.9e-07 57.8 75 40.0
Sp5g31410 Schrenkiella parvula HOM05D000076 ORTHO05D001150 4.9e-07 57.8 73 41.1
TAR376G0807 Trochodendron aralioides HOM05D000076 ORTHO05D001150 6.3e-07 57.4 76 47.4
Cc10_g00710 Coffea canephora HOM05D000076 ORTHO05D001150 8.3e-07 57.0 83 48.2
Carub.0002s2316 Capsella rubella HOM05D000076 ORTHO05D001150 1.4e-06 56.2 68 42.6
SHI07999 Sapria himalayana HOM05D000076 ORTHO05D001150 1.8e-06 55.8 77 45.5
Potri.002G011100 Populus trichocarpa HOM05D000076 ORTHO05D001150 2.4e-06 55.5 73 39.7
MD15G1002400 Malus domestica HOM05D000076 ORTHO05D001150 3.1e-06 55.1 72 41.7
Actinidia29789 Actinidia chinensis HOM05D000076 ORTHO05D001150 5.4e-06 54.3 72 47.2
HanXRQChr14g0428281 Helianthus annuus HOM05D000076 ORTHO05D001150 5.4e-06 54.3 79 41.8
Nitab4.5_0000699g0030 Nicotiana tabacum HOM05D000076 ORTHO05D001150 5.4e-06 54.3 59 45.8
AT1G76270 Arabidopsis thaliana HOM05D000076 ORTHO05D001150 7.0e-06 53.9 68 41.2
BolC6t40063H Brassica oleracea HOM05D000076 ORTHO05D001150 7.0e-06 53.9 77 41.6
Sabra05G0193400 Salix brachista HOM05D000076 ORTHO05D001150 7.0e-06 53.9 63 41.3
BraA07t31714Z Brassica rapa HOM05D000076 ORTHO05D001150 9.2e-06 53.5 77 42.9
Nn6g31743 Nelumbo nucifera HOM05D000076 ORTHO05D001150 9.2e-06 53.5 77 44.2


User provided reference genes

Program Settings