Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 2.9e-56 222.2 165 100.0
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 5.8e-33 144.8 165 72.1
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 4.9e-32 141.7 165 72.1
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 1.1e-31 140.6 165 72.7
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 2.4e-31 139.4 165 70.9
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 3.2e-31 139.0 165 73.9
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 4.2e-31 138.7 165 70.3
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 5.4e-31 138.3 165 70.9
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 5.4e-31 138.3 165 70.3
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 1.6e-30 136.7 168 71.4
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 1.6e-30 136.7 165 73.9
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 2.7e-30 136.0 166 69.9
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 3.5e-30 135.6 164 70.7
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 4.6e-30 135.2 166 71.1
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 6.0e-30 134.8 165 70.9
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 1.0e-29 134.0 165 67.3
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 1.3e-29 133.7 169 69.8
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 1.3e-29 133.7 167 70.7
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 2.3e-29 132.9 165 67.9
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 2.3e-29 132.9 165 69.7
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 3.0e-29 132.5 167 69.5
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 6.6e-29 131.3 167 68.9
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 8.7e-29 131.0 166 70.5
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 2.5e-28 129.4 170 68.8
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 3.3e-28 129.0 147 74.1
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 4.3e-28 128.6 166 68.7
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 5.6e-28 128.3 165 70.3
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 9.6e-28 127.5 139 77.0
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 9.6e-28 127.5 166 69.9
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.3e-27 127.1 127 83.5
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 1.6e-27 126.7 165 66.1
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 1.6e-27 126.7 166 68.7
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.6e-27 126.7 166 68.7
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 1.6e-27 126.7 167 67.7
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 2.1e-27 126.3 168 69.0
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 2.8e-27 125.9 165 66.7
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 3.6e-27 125.6 165 72.1
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 4.8e-27 125.2 166 65.7
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 4.8e-27 125.2 164 67.1
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 4.8e-27 125.2 132 78.0
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 4.8e-27 125.2 165 69.1
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 6.2e-27 124.8 165 65.5
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 8.1e-27 124.4 166 67.5
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 1.4e-26 123.6 167 69.5
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 1.4e-26 123.6 167 67.1
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 1.8e-26 123.2 165 66.7
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 2.4e-26 122.9 165 69.7
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 5.3e-26 121.7 166 71.7
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 6.9e-26 121.3 136 75.7
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 6.9e-26 121.3 165 68.5
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 6.9e-26 121.3 165 68.5
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 6.9e-26 121.3 165 68.5
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 6.9e-26 121.3 166 68.7
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 6.9e-26 121.3 169 67.5
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 9.0e-26 120.9 171 64.9
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 9.0e-26 120.9 166 69.3
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 1.5e-25 120.2 165 67.9
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 1.5e-25 120.2 127 63.8
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 2.0e-25 119.8 165 67.9
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 2.0e-25 119.8 166 66.9
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.0e-25 119.8 127 82.7
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 3.4e-25 119.0 167 65.3
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 3.4e-25 119.0 167 69.5
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 4.5e-25 118.6 167 68.3
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 5.8e-25 118.2 165 65.5
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 5.8e-25 118.2 166 65.7
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 7.6e-25 117.9 115 80.9
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 7.6e-25 117.9 115 80.9
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 7.6e-25 117.9 137 71.5
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 9.9e-25 117.5 127 66.1
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 1.7e-24 116.7 124 75.8
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 2.2e-24 116.3 167 64.7
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 2.2e-24 116.3 165 67.3
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 2.9e-24 115.9 129 76.7
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 8.4e-24 114.4 165 64.8
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.4e-23 113.6 130 79.2
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 2.4e-23 112.8 165 65.5
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 7.1e-23 111.3 132 76.5
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 4.6e-22 108.6 163 52.8
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 1.0e-21 107.5 168 64.9
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 1.8e-21 106.7 159 68.6
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 3.9e-21 105.5 96 62.5
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 6.7e-21 104.8 96 62.5
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.5e-20 103.6 113 76.1
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 3.3e-20 102.4 137 70.1
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 3.3e-20 102.4 148 63.5
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 3.3e-20 102.4 120 78.3
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 2.1e-19 99.8 164 62.2
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 6.2e-19 98.2 158 63.3
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 1.2e-17 94.0 96 58.3
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 3.4e-17 92.4 117 43.6
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 7.6e-17 91.3 110 76.4
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 1.4e-15 87.0 125 72.0
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.4e-15 86.3 130 44.6
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 2.4e-15 86.3 164 60.4
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 3.9e-13 79.0 124 68.5
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 2.5e-12 76.3 89 67.4
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 1.1e-10 70.9 123 58.5
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 3.4e-09 65.9 77 49.4
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 7.6e-09 64.7 125 65.6
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.2e-08 63.2 108 35.2
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 1.1e-07 60.8 66 48.5


User provided reference genes

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