Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 6.2e-194 680.6 349 100.0
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 2.2e-167 592.4 345 87.5
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 5.5e-166 587.8 346 85.8
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 7.2e-166 587.4 343 86.0
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 1.2e-165 586.6 346 85.3
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 2.1e-165 585.9 346 86.1
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 2.7e-165 585.5 346 85.8
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 1.1e-163 580.1 337 86.6
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 1.1e-163 580.1 341 85.0
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 1.1e-163 580.1 341 85.0
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 1.5e-163 579.7 342 85.4
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 1.9e-163 579.3 346 83.8
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 2.8e-162 575.5 346 83.2
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 3.7e-162 575.1 342 85.4
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 1.5e-160 569.7 340 83.8
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 3.4e-160 568.5 353 83.3
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 7.7e-160 567.4 338 84.9
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 2.9e-159 565.5 340 83.2
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 3.8e-159 565.1 341 83.3
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 8.5e-159 563.9 339 84.4
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 1.1e-158 563.5 335 85.1
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 1.4e-158 563.1 344 82.3
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.5e-158 562.4 338 83.4
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 3.2e-158 562.0 338 84.3
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 7.2e-158 560.8 336 83.6
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 7.2e-158 560.8 341 82.7
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 9.4e-158 560.5 336 84.2
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 9.4e-158 560.5 336 84.2
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 1.6e-157 559.7 336 83.6
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 2.1e-157 559.3 336 83.3
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 1.0e-156 557.0 374 77.3
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 3.0e-156 555.4 337 82.2
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 3.0e-156 555.4 338 82.5
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 3.0e-156 555.4 336 83.6
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 3.0e-156 555.4 336 83.3
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 3.9e-156 555.1 339 81.7
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 5.1e-156 554.7 342 81.3
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 5.1e-156 554.7 334 83.8
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 8.8e-156 553.9 342 81.0
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 8.8e-156 553.9 349 80.8
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 1.1e-155 553.5 342 81.0
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 1.1e-155 553.5 342 81.0
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 1.1e-155 553.5 342 81.0
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 1.1e-155 553.5 342 81.0
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 2.0e-155 552.7 340 81.5
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 2.0e-155 552.7 342 80.7
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 2.6e-155 552.4 342 80.7
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 2.6e-155 552.4 336 83.0
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 2.6e-155 552.4 336 82.7
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 3.3e-155 552.0 337 81.9
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 3.3e-155 552.0 338 82.5
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 4.4e-155 551.6 337 81.9
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 4.4e-155 551.6 342 80.7
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 4.4e-155 551.6 342 80.7
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 5.7e-155 551.2 342 80.7
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 5.7e-155 551.2 342 80.7
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 5.7e-155 551.2 336 82.7
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 9.7e-155 550.4 349 80.2
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 9.7e-155 550.4 349 80.2
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 9.7e-155 550.4 339 80.5
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 1.3e-154 550.1 342 80.4
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 2.2e-154 549.3 340 81.8
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 2.2e-154 549.3 336 80.7
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 2.8e-154 548.9 335 82.1
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 2.8e-154 548.9 342 80.4
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 3.7e-154 548.5 334 82.6
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 3.7e-154 548.5 336 82.1
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 4.8e-154 548.1 334 83.5
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 4.8e-154 548.1 336 81.8
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 6.3e-154 547.7 335 82.4
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 6.3e-154 547.7 335 82.4
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 8.2e-154 547.4 338 81.4
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 8.2e-154 547.4 336 81.8
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 1.4e-153 546.6 340 81.8
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 1.8e-153 546.2 336 82.7
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 1.8e-153 546.2 336 81.8
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 2.4e-153 545.8 337 80.4
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 2.4e-153 545.8 334 83.2
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 2.4e-153 545.8 333 82.3
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 5.3e-153 544.7 342 79.5
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 5.3e-153 544.7 335 80.3
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 9.1e-153 543.9 358 77.4
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 9.1e-153 543.9 333 82.0
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 1.2e-152 543.5 336 80.7
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 2.0e-152 542.7 332 84.6
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 2.0e-152 542.7 340 80.3
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.5e-152 541.6 335 80.3
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 5.9e-152 541.2 333 81.7
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 5.9e-152 541.2 337 79.5
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 7.7e-152 540.8 341 78.6
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.0e-151 540.4 333 81.4
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 1.3e-151 540.0 334 81.1
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.2e-151 539.3 337 79.2
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 2.2e-151 539.3 337 79.2
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 2.9e-151 538.9 335 80.0
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 3.8e-151 538.5 340 80.0
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 3.8e-151 538.5 335 80.0
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 3.8e-151 538.5 345 79.4
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 5.0e-151 538.1 340 79.7
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 5.0e-151 538.1 335 81.5
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 5.0e-151 538.1 334 82.6
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 8.5e-151 537.3 337 79.5
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 8.5e-151 537.3 335 80.9
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 2.5e-150 535.8 338 79.3
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 3.2e-150 535.4 335 79.1
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 4.2e-150 535.0 338 80.8
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 4.2e-150 535.0 335 80.3
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 5.5e-150 534.6 340 77.6
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 1.2e-149 533.5 333 79.9
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.1e-149 532.7 335 78.5
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 2.7e-149 532.3 344 77.6
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 6.7e-148 527.7 335 78.5
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 8.8e-148 527.3 333 79.9
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 3.3e-147 525.4 464 61.9
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 9.7e-147 523.9 335 76.7
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 9.7e-147 523.9 414 67.6
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 2.2e-146 522.7 339 78.2
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 3.7e-146 521.9 385 71.4
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 4.8e-146 521.5 335 76.7
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 6.3e-146 521.2 335 76.7
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 6.3e-146 521.2 331 78.5
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 2.4e-145 519.2 338 77.5
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 7.0e-145 517.7 372 73.1
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 7.0e-145 517.7 334 76.6
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 1.6e-144 516.5 344 76.2
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 2.6e-144 515.8 338 79.0
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 4.5e-144 515.0 334 76.6
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 8.5e-143 510.8 333 77.8
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 1.9e-142 509.6 345 75.7
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.5e-142 508.1 333 78.4
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 7.2e-142 507.7 333 77.8
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 1.2e-141 506.9 335 75.2
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 1.0e-140 503.8 336 74.4
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 1.5e-139 500.0 333 75.4
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 1.3e-138 496.9 337 75.4
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 1.7e-135 486.5 298 80.9
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 2.7e-133 479.2 337 73.0
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.3e-132 476.1 337 72.7
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 9.5e-126 454.1 271 82.7
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 1.0e-124 450.7 296 74.7
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 4.5e-120 435.3 268 81.0
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 3.3e-118 429.1 332 69.3
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 2.1e-117 426.4 323 68.7
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 1.0e-116 424.1 270 78.1
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 7.5e-115 417.9 330 66.1
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 2.9e-114 416.0 324 67.0
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 8.3e-114 414.5 260 79.2
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 7.5e-107 391.3 338 63.0
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 4.9e-98 362.1 234 79.1
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 1.1e-97 360.9 268 68.3
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 3.9e-95 352.4 218 79.4
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 4.4e-91 339.0 220 76.4
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 4.3e-86 322.4 216 75.9
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 1.6e-85 320.5 190 83.2
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 3.2e-81 306.2 183 83.1
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 5.8e-75 285.4 346 49.7
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 1.2e-64 251.1 191 69.6
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 5.6e-62 242.3 324 42.6
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 5.5e-57 225.7 148 73.6
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 2.7e-56 223.4 139 81.3
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.8e-55 220.7 244 54.5
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 1.4e-49 201.1 204 59.8
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 2.1e-40 170.6 110 76.4
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 5.9e-35 152.5 99 76.8
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 3.0e-31 140.2 140 52.9
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 3.0e-31 140.2 140 52.9
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 6.1e-24 115.9 189 46.6
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 2.6e-22 110.5 60 93.3
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 5.7e-22 109.4 78 71.8
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 3.2e-17 93.6 89 59.6
QL07p006183 Quercus lobata HOM05D003701 ORTHO05D030296 1.2e-16 91.7 60 78.3
QL09p045974 Quercus lobata HOM05D003701 ORTHO05D030296 1.2e-16 91.7 60 78.3
Medtr0368s0020 Medicago truncatula HOM05D003701 ORTHO05D026922 6.8e-15 85.9 64 68.8
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 8.8e-15 85.5 107 49.5
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 4.4e-14 83.2 46 82.6
Glyma.14G185666 Glycine max HOM05D003701 ORTHO05D026922 5.7e-14 82.8 55 78.2
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 3.5e-11 73.6 49 69.4
C02p38530 Brassica napus HOM05D003701 ORTHO05D101262 5.9e-11 72.8 83 50.6
BolC2t09870H Brassica oleracea HOM05D003701 ORTHO05D041413 7.7e-11 72.4 83 51.8
C05p40290 Brassica napus HOM05D003701 ORTHO05D041413 1.0e-10 72.0 83 51.8
Actinidia38274 Actinidia chinensis HOM05D003701 ORTHO05D012924 1.2e-08 65.1 40 80.0
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.2e-07 59.7 73 46.6
CBR_g74262 Chara braunii HOM05D003701 ORTHO05D004771 8.9e-07 58.9 43 72.1
MBI09_g06128_MAGBIO Magnolia biondii HOM05D018637 ORTHO05D012924 5.7e-06 56.2 40 65.0


User provided reference genes

Program Settings