Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 1.2e-277 959.1 471 100.0
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 7.9e-160 567.8 500 59.6
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 3.9e-159 565.5 502 60.4
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 2.7e-144 516.2 491 54.8
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 4.7e-144 515.4 491 56.0
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 1.8e-140 503.4 492 56.1
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 2.0e-139 500.0 504 53.4
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 2.9e-138 496.1 491 53.4
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 5.0e-138 495.4 493 55.4
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 5.0e-138 495.4 500 52.4
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 9.4e-137 491.1 500 52.2
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 9.4e-137 491.1 494 54.3
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 3.0e-135 486.1 504 51.2
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 4.4e-134 482.3 494 52.6
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 1.7e-133 480.3 504 53.8
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 7.0e-132 474.9 496 52.6
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 2.0e-131 473.4 483 50.9
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.2e-128 464.2 433 57.0
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 1.3e-125 454.1 490 50.8
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.3e-125 454.1 472 52.8
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 6.3e-125 451.8 472 51.3
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 1.4e-124 450.7 497 52.1
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 1.4e-124 450.7 483 51.3
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 9.1e-124 448.0 490 50.6
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 4.7e-120 435.6 502 49.6
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 8.0e-120 434.9 488 49.4
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 1.2e-118 431.0 493 47.9
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 6.3e-117 425.2 446 53.1
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 8.3e-117 424.9 494 48.4
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 4.1e-116 422.5 486 47.1
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 1.6e-115 420.6 490 48.4
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 2.0e-115 420.2 496 47.2
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 3.5e-115 419.5 498 47.4
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 3.5e-115 419.5 492 44.7
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 4.5e-115 419.1 488 48.0
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 7.8e-115 418.3 487 46.8
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 1.0e-114 417.9 500 47.2
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 6.6e-114 415.2 500 47.8
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 8.6e-114 414.8 492 50.2
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 1.6e-112 410.6 498 45.4
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 1.0e-111 407.9 500 47.4
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 2.3e-111 406.8 487 45.4
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 2.3e-111 406.8 502 46.0
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 3.1e-111 406.4 497 46.7
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 4.0e-111 406.0 502 46.0
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 6.8e-111 405.2 487 46.0
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 1.2e-110 404.4 486 48.6
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 2.6e-110 403.3 487 45.2
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 9.8e-110 401.4 498 45.4
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 1.3e-109 401.0 502 45.8
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 3.7e-109 399.4 497 43.5
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 4.9e-109 399.1 493 47.5
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 1.1e-108 397.9 495 44.6
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 1.4e-108 397.5 490 45.1
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 1.4e-108 397.5 494 44.5
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 3.2e-108 396.4 490 43.3
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 7.0e-108 395.2 481 48.0
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 1.2e-107 394.4 494 44.9
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 1.2e-107 394.4 490 43.7
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 3.5e-107 392.9 487 45.6
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 6.0e-107 392.1 493 44.8
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 7.8e-107 391.7 493 43.4
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 1.0e-106 391.3 493 45.2
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 1.7e-106 390.6 491 43.4
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.1e-105 387.9 482 44.2
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 1.1e-105 387.9 497 44.7
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 5.6e-105 385.6 489 43.6
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 2.1e-104 383.6 496 44.4
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 6.2e-104 382.1 494 43.1
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 2.3e-103 380.2 472 43.4
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 4.0e-103 379.4 486 44.9
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 5.8e-102 375.6 418 48.1
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 1.1e-100 371.3 491 41.1
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 3.2e-100 369.8 493 43.6
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 5.4e-100 369.0 434 46.5
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 2.7e-99 366.7 497 41.6
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 2.7e-99 366.7 488 41.8
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 2.7e-99 366.7 532 41.2
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 3.0e-98 363.2 482 41.7
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 1.1e-97 361.3 481 41.8
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 1.9e-97 360.5 489 41.1
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 4.7e-96 355.9 507 40.8
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 4.0e-95 352.8 497 41.9
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 6.8e-95 352.1 392 46.9
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 7.5e-94 348.6 370 53.0
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 3.7e-93 346.3 481 41.2
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 2.4e-92 343.6 594 37.9
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 3.2e-92 343.2 489 39.7
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 3.0e-90 336.7 494 40.3
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 1.5e-89 334.3 500 39.0
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 2.5e-89 333.6 485 39.4
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 6.2e-88 328.9 504 38.1
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 5.2e-87 325.9 396 44.4
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 8.9e-87 325.1 492 40.7
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 1.7e-74 284.3 493 37.9
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.3e-72 278.1 219 65.8
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 1.9e-68 264.2 409 38.1
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 1.8e-66 257.7 459 37.0
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 3.3e-65 253.4 417 37.6
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 2.8e-64 250.4 509 33.8
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 2.0e-62 244.2 515 33.0
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 1.7e-61 241.1 501 33.5
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 2.9e-61 240.4 483 34.8
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 1.3e-58 231.5 406 34.7
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 6.9e-55 219.2 330 40.6
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 3.6e-43 180.3 389 28.5
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 2.0e-41 174.5 351 33.6
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 1.4e-39 168.3 240 39.2
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 7.4e-33 146.0 115 63.5
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 2.0e-30 137.9 473 25.4
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 7.4e-25 119.4 132 47.0
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 9.7e-25 119.0 219 34.7
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 1.3e-24 118.6 310 29.4
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 8.2e-24 115.9 224 32.1
AagrBONN_evm.TU.Sc2ySwM_228.2481 Anthoceros agrestis HOM05D006101 ORTHO05D007422 3.2e-20 104.0 457 24.5
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 1.6e-19 101.7 155 41.9
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 1.2e-17 95.5 85 56.5
SMO351G0356 Selaginella moellendorffii HOM05D006101 ORTHO05D007422 1.5e-17 95.1 376 23.4
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 2.2e-16 91.3 108 44.4
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 8.3e-08 62.8 132 31.8


User provided reference genes

Program Settings