Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 0.0e+00 1858.2 926 100.0
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 7.0e-245 851.3 466 88.2
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 1.6e-244 850.1 468 87.8
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 6.6e-243 844.7 469 86.8
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 1.1e-242 844.0 466 87.3
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 2.5e-242 842.8 469 86.6
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 2.5e-242 842.8 469 87.4
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 3.3e-242 842.4 471 85.8
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 4.7e-241 838.6 466 87.1
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 6.2e-241 838.2 469 85.5
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 6.2e-241 838.2 469 85.7
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 8.1e-241 837.8 472 85.8
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 1.4e-240 837.0 467 87.4
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 3.1e-240 835.9 469 85.3
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 3.1e-240 835.9 469 85.1
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 5.2e-240 835.1 469 84.9
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 5.2e-240 835.1 468 86.1
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 1.5e-239 833.6 469 84.9
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 2.0e-239 833.2 469 85.1
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 2.0e-239 833.2 469 85.1
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 2.6e-239 832.8 469 84.6
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 3.4e-239 832.4 469 85.5
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 5.8e-239 831.6 470 84.7
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 7.5e-239 831.2 469 85.3
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 1.3e-238 830.5 469 84.4
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 1.3e-238 830.5 465 86.5
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 4.9e-238 828.6 468 85.3
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 6.4e-238 828.2 468 85.0
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 8.3e-238 827.8 469 83.8
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 8.3e-238 827.8 469 84.6
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 1.4e-237 827.0 469 84.0
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 2.1e-236 823.2 470 84.5
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 2.1e-236 823.2 468 84.4
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 4.6e-236 822.0 469 83.8
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 7.8e-236 821.2 470 83.8
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 1.0e-235 820.8 469 84.4
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.0e-235 820.8 469 84.6
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 1.3e-235 820.5 469 83.2
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.3e-235 820.5 469 84.6
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 1.7e-235 820.1 498 81.9
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 2.3e-235 819.7 469 84.0
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 3.0e-235 819.3 469 84.0
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 1.5e-234 817.0 469 83.4
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 1.9e-234 816.6 465 84.7
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.9e-234 816.6 469 84.2
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 2.5e-234 816.2 465 84.5
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 5.6e-234 815.1 469 82.9
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 5.6e-234 815.1 469 82.9
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 5.6e-234 815.1 469 82.9
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 7.3e-234 814.7 468 83.1
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 1.2e-233 813.9 464 84.3
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 1.6e-233 813.5 465 84.3
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 2.1e-233 813.1 469 83.2
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 3.6e-233 812.4 465 84.1
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 8.1e-233 811.2 470 83.2
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 1.4e-232 810.4 469 82.3
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 2.4e-232 809.7 492 79.9
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 4.4e-231 805.4 475 82.3
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 9.9e-231 804.3 470 81.7
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 2.2e-230 803.1 469 82.3
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 3.8e-230 802.4 469 81.7
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 3.8e-230 802.4 470 81.1
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 3.8e-230 802.4 469 81.9
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 4.9e-230 802.0 479 82.0
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 6.4e-230 801.6 471 83.0
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 4.2e-229 798.9 469 81.4
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 1.2e-228 797.3 514 76.8
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 2.1e-228 796.6 469 81.7
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 2.7e-228 796.2 469 81.2
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 4.6e-228 795.4 572 71.0
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 6.0e-228 795.0 466 80.9
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 2.3e-227 793.1 467 81.6
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 3.0e-227 792.7 469 80.6
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 3.0e-227 792.7 469 80.4
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 5.1e-227 792.0 469 80.2
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 6.6e-227 791.6 469 80.6
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 6.6e-227 791.6 469 80.6
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 8.7e-227 791.2 513 75.8
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 1.5e-226 790.4 469 80.4
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 1.9e-226 790.0 469 80.2
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 1.9e-226 790.0 469 80.2
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 1.9e-226 790.0 466 80.3
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 1.9e-226 790.0 466 80.3
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 2.5e-226 789.6 469 80.0
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 3.3e-226 789.3 469 79.1
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 4.3e-226 788.9 472 79.7
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 7.3e-226 788.1 490 78.6
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 3.6e-225 785.8 469 80.0
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 4.7e-225 785.4 469 79.7
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 1.1e-224 784.3 439 86.8
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 1.8e-224 783.5 466 80.3
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 1.2e-223 780.8 469 80.8
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 1.2e-220 770.8 444 84.7
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 2.1e-220 770.0 466 80.0
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 5.1e-219 765.4 469 78.0
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 6.6e-219 765.0 465 79.6
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 3.3e-218 762.7 470 77.9
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 7.6e-215 751.5 464 80.0
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 1.3e-214 750.7 464 77.6
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 1.3e-214 750.7 465 79.1
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 4.9e-214 748.8 469 75.3
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 3.5e-212 742.7 468 75.4
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 8.7e-211 738.0 464 78.0
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 1.1e-208 731.1 467 74.1
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 2.1e-201 706.8 448 79.0
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 2.4e-200 703.4 483 73.7
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 3.2e-189 666.4 462 72.5
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 5.1e-187 659.1 464 70.5
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 1.1e-184 651.4 467 67.9
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 9.7e-178 628.2 466 63.9
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 2.2e-177 627.1 397 79.3
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 2.6e-162 577.0 511 57.7
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 4.8e-161 572.8 462 62.8
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 2.8e-140 503.8 332 74.4
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 8.0e-140 502.3 380 63.9
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 5.8e-138 496.1 462 54.8
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 8.1e-124 449.1 290 75.9
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 3.9e-86 323.9 254 62.2
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 4.3e-77 293.9 158 86.7
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 2.2e-44 185.3 427 29.7
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 4.4e-37 161.0 208 46.2
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 1.2e-31 142.9 80 85.0
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 4.4e-29 134.4 397 27.5
CARHR242160 Cardamine hirsuta HOM05D006107 ORTHO05D007455 6.8e-22 110.5 79 65.8
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 8.9e-22 110.2 66 74.2
SEGI_09117 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 1.6e-18 99.4 96 51.0
CDE05G3043 Ceratophyllum demersum HOM05D003397 ORTHO05D004390 1.9e-08 65.9 362 24.6
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 9.5e-08 63.5 30 96.7


User provided reference genes

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