Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007224.1 Olea europaea HOM05D002704 ORTHO05D002891 7.9e-94 347.1 169 100.0
Oeu007226.1 Olea europaea HOM05D002704 ORTHO05D002891 7.9e-94 347.1 169 100.0
Oeu006703.1 Olea europaea HOM05D002704 ORTHO05D002891 3.1e-66 255.4 170 77.6
PGSC0003DMG400021617 Solanum tuberosum HOM05D002704 ORTHO05D002891 7.0e-42 174.5 169 58.0
Peaxi162Scf00286g00244 Petunia axillaris HOM05D002704 ORTHO05D002891 5.0e-40 168.3 149 65.1
Duzib151G0761 Durio zibethinus HOM05D002704 ORTHO05D002891 4.2e-39 165.2 177 53.7
MSTRG.24593 Avicennia marina HOM05D002704 ORTHO05D002891 9.5e-39 164.1 151 60.3
QL10p046538 Quercus lobata HOM05D002704 ORTHO05D002891 2.3e-37 159.5 171 56.7
COL.COLO4_24351 Corchorus olitorius HOM05D002704 ORTHO05D002891 4.0e-37 158.7 175 52.0
Thecc.04G181700 Theobroma cacao HOM05D002704 ORTHO05D002891 4.0e-37 158.7 173 51.4
SalBow6G4869 Salvia bowleyana HOM05D002704 ORTHO05D002891 6.8e-37 157.9 170 52.9
GSVIVG01013547001 Vitis vinifera HOM05D002704 ORTHO05D002891 6.8e-37 157.9 175 53.7
Solyc09g098490.4 Solanum lycopersicum HOM05D001811 ORTHO05D001738 2.6e-36 156.0 141 59.6
Dinv44226 Davidia involucrata HOM05D002704 ORTHO05D002891 7.5e-36 154.5 166 54.2
Duzib268G0568 Durio zibethinus HOM05D002704 ORTHO05D002891 7.5e-36 154.5 175 50.9
Duzib268G0864 Durio zibethinus HOM05D002704 ORTHO05D002891 1.7e-35 153.3 174 50.6
CSS0004996 Camellia sinensis var. sinensis HOM05D002704 ORTHO05D002891 6.3e-35 151.4 166 49.4
Sabra02G0176600 Salix brachista HOM05D002704 ORTHO05D002891 1.8e-34 149.8 189 51.9
CSS0030073 Camellia sinensis var. sinensis HOM05D002704 ORTHO05D002891 3.1e-34 149.1 166 48.8
Potri.002G231400 Populus trichocarpa HOM05D002704 ORTHO05D002891 3.1e-34 149.1 191 51.3
Sopen09g036400 Solanum pennellii HOM05D002704 ORTHO05D002891 3.1e-34 149.1 145 57.9
Hma1.2p1_0429F.1_g151125 Hydrangea macrophylla HOM05D002704 ORTHO05D002891 4.1e-34 148.7 183 47.5
Actinidia17222 Actinidia chinensis HOM05D002704 ORTHO05D002891 1.2e-33 147.1 167 53.3
Manes.04G050300 Manihot esculenta HOM05D002704 ORTHO05D002891 1.6e-33 146.7 151 55.6
Atru.chr3.1657 Acer truncatum HOM05D002704 ORTHO05D002891 2.7e-33 146.0 138 60.1
Prupe.1G182000 Prunus persica HOM05D002704 ORTHO05D002891 2.7e-33 146.0 125 60.8
Cpa.g.c36743 Carica papaya HOM05D002704 ORTHO05D002891 5.9e-33 144.8 169 51.5
Potri.014G150900 Populus trichocarpa HOM05D002704 ORTHO05D002891 5.9e-33 144.8 135 59.3
Manes.11G114400 Manihot esculenta HOM05D002704 ORTHO05D002891 1.3e-32 143.7 201 47.8
TAR633G1006 Trochodendron aralioides HOM05D002704 ORTHO05D002891 1.3e-32 143.7 180 47.2
CiPaw.01G106200 Carya illinoinensis HOM05D002704 ORTHO05D002891 1.7e-32 143.3 129 58.1
CiPaw.02G057300 Carya illinoinensis HOM05D002704 ORTHO05D002891 1.7e-32 143.3 175 49.1
PSO357G0625 Papaver somniferum HOM05D002704 ORTHO05D002891 2.9e-32 142.5 179 46.9
Ciclev10023373m.g Citrus clementina HOM05D002704 ORTHO05D002891 5.0e-32 141.7 174 49.4
Gorai.005G017900 Gossypium raimondii HOM05D002704 ORTHO05D002891 1.9e-31 139.8 182 47.3
Actinidia35890 Actinidia chinensis HOM05D002704 ORTHO05D002891 9.5e-31 137.5 171 49.7
HPP92_023705 Vanilla planifolia HOM05D002704 ORTHO05D002891 1.6e-30 136.7 180 46.7
Gohir.D02G014400 Gossypium hirsutum HOM05D002704 ORTHO05D002891 6.1e-30 134.8 150 50.7
Gohir.A02G013402 Gossypium hirsutum HOM05D002704 ORTHO05D002891 1.0e-29 134.0 122 57.4
Peaxi162Scf00378g00084 Petunia axillaris HOM05D002704 ORTHO05D002891 1.4e-29 133.7 149 51.0
PSO170G1174 Papaver somniferum HOM05D002704 ORTHO05D002891 1.8e-29 133.3 180 46.1
Sabra15G0066300 Salix brachista HOM05D002704 ORTHO05D002891 8.9e-29 131.0 138 49.3
Aqoxy2G04081 Aquilegia oxysepala HOM05D002704 ORTHO05D002891 9.8e-28 127.5 127 51.2
Aqoxy6G02333 Aquilegia oxysepala HOM05D002704 ORTHO05D002891 9.8e-28 127.5 127 51.2
Sed0000491 Sechium edule HOM05D002704 ORTHO05D002891 2.2e-27 126.3 140 52.1
Zm00001eb411630 Zea mays HOM05D002704 ORTHO05D002891 4.9e-27 125.2 168 43.5
Zm00001eb133700 Zea mays HOM05D002704 ORTHO05D002891 5.4e-26 121.7 121 51.2
ClCG08G004030 Citrullus lanatus HOM05D002704 ORTHO05D002891 2.0e-25 119.8 140 44.3
SEGI_04164 Sequoiadendron giganteum HOM05D002704 ORTHO05D002891 5.0e-24 115.2 146 47.3
SGA_v2.0_scaffold31G12567 Striga asiatica HOM05D002704 ORTHO05D002891 1.1e-23 114.0 94 62.8
Os11g0294400 Oryza sativa ssp. japonica HOM05D002704 ORTHO05D002891 5.6e-23 111.7 145 46.2
CANSAT78G1882 Cannabis sativa HOM05D002704 ORTHO05D002891 7.3e-23 111.3 194 40.7
Zm00001eb199020 Zea mays HOM05D002704 ORTHO05D002891 2.1e-22 109.8 126 50.0
Sed0010272 Sechium edule HOM05D002704 ORTHO05D002891 1.8e-21 106.7 108 53.7
Dinv22667 Davidia involucrata HOM05D002704 ORTHO05D002891 2.3e-21 106.3 103 57.3
CDE08G0150 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 4.0e-21 105.5 125 45.6
MBI08_g28697_MAGBIO Magnolia biondii HOM05D002704 ORTHO05D002891 6.8e-21 104.8 117 48.7
CsaV3_6G003190 Cucumis sativus L. HOM05D002704 ORTHO05D002891 1.5e-20 103.6 121 51.2
SEGI_20858 Sequoiadendron giganteum HOM05D002704 ORTHO05D002891 3.2e-18 95.9 152 35.5
HPP92_011170 Vanilla planifolia HOM05D002704 ORTHO05D002891 5.4e-18 95.1 142 32.4
ATR0782G003 Amborella trichopoda HOM05D002704 ORTHO05D002891 6.0e-17 91.7 150 34.7
Sed0024849 Sechium edule HOM05D002704 ORTHO05D002891 1.3e-16 90.5 153 35.3
RcHm_v2.0_Chr7g0239041 Rosa chinensis HOM05D002704 ORTHO05D002891 5.1e-16 88.6 140 36.4
TWI56G1046 Tripterygium wilfordii HOM05D002704 ORTHO05D002891 6.6e-16 88.2 126 35.7
ClCG11G015290 Citrullus lanatus HOM05D002704 ORTHO05D002891 1.1e-15 87.4 153 35.3
MELO3C011023.2 Cucumis melo HOM05D002704 ORTHO05D002891 3.3e-15 85.9 196 30.1
CsaV3_2G029650 Cucumis sativus L. HOM05D002704 ORTHO05D002891 3.3e-15 85.9 195 29.7
TAR628G0302 Trochodendron aralioides HOM05D002704 ORTHO05D002891 3.3e-15 85.9 181 31.5
MBI11_g35640_MAGBIO Magnolia biondii HOM05D002704 ORTHO05D002891 4.3e-15 85.5 109 44.0
TWI12G0499 Tripterygium wilfordii HOM05D002704 ORTHO05D002891 4.3e-15 85.5 126 35.7
CDE10G0971 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 5.6e-15 85.1 126 35.7
Lsat_1_v5_gn_9_41620 Lactuca sativa HOM05D002704 ORTHO05D002891 5.6e-15 85.1 158 34.2
FAN08G2281 Fragaria x ananassa HOM05D002704 ORTHO05D002891 7.3e-15 84.7 200 29.5
MELO3C003450.2 Cucumis melo HOM05D002704 ORTHO05D002891 9.5e-15 84.3 160 31.2
HPP92_019307 Vanilla planifolia HOM05D002704 ORTHO05D002891 9.5e-15 84.3 131 34.4
Ciclev10002416m.g Citrus clementina HOM05D002704 ORTHO05D002891 1.6e-14 83.6 189 30.2
FvH4_5g37370 Fragaria vesca HOM05D002704 ORTHO05D002891 1.6e-14 83.6 144 33.3
FAN13G2774 Fragaria x ananassa HOM05D002704 ORTHO05D002891 1.6e-14 83.6 144 33.3
FAN04G1068 Fragaria x ananassa HOM05D002704 ORTHO05D002891 2.1e-14 83.2 144 33.3
Atru.chr13.1197 Acer truncatum HOM05D002704 ORTHO05D002891 3.6e-14 82.4 170 32.4
CsaV3_3G048710 Cucumis sativus L. HOM05D002704 ORTHO05D002891 3.6e-14 82.4 162 30.9
Aqoxy6G00791 Aquilegia oxysepala HOM05D002704 ORTHO05D002891 4.7e-14 82.0 140 32.9
CDE10G0994 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 6.2e-14 81.6 121 37.2
MD15G1368100 Malus domestica HOM05D002704 ORTHO05D002891 6.2e-14 81.6 208 30.3
Nitab4.5_0005777g0010 Nicotiana tabacum HOM05D002704 ORTHO05D002891 6.2e-14 81.6 186 30.1
Sed0023198 Sechium edule HOM05D002704 ORTHO05D002891 6.2e-14 81.6 145 33.8
EL10Ac1g01225 Beta vulgaris HOM05D002704 ORTHO05D002891 1.1e-13 80.9 176 29.0
MD08G1182400 Malus domestica HOM05D002704 ORTHO05D002891 1.1e-13 80.9 183 32.2
Manes.02G153000 Manihot esculenta HOM05D002704 ORTHO05D002891 1.1e-13 80.9 149 31.5
GSVIVG01009025001 Vitis vinifera HOM05D002704 ORTHO05D002891 1.1e-13 80.9 186 29.0
PGSC0003DMG400006402 Solanum tuberosum HOM05D002704 ORTHO05D002891 1.4e-13 80.5 151 32.5
RcHm_v2.0_Chr4g0408971 Rosa chinensis HOM05D002704 ORTHO05D002891 1.8e-13 80.1 127 40.2
MBI05_g19349_MAGBIO Magnolia biondii HOM05D002704 ORTHO05D002891 2.3e-13 79.7 150 31.3
Manes.18G067800 Manihot esculenta HOM05D002704 ORTHO05D002891 2.3e-13 79.7 147 31.3
Sed0020547 Sechium edule HOM05D002704 ORTHO05D002891 2.3e-13 79.7 177 29.9
ClCG08G011070 Citrullus lanatus HOM05D002704 ORTHO05D002891 3.1e-13 79.3 195 29.7
Dinv14325 Davidia involucrata HOM05D002704 ORTHO05D002891 5.2e-13 78.6 171 29.8
Solyc04g074080.3 Solanum lycopersicum HOM05D002704 ORTHO05D002891 5.2e-13 78.6 143 32.9
AUR62038516 Chenopodium quinoa HOM05D002704 ORTHO05D002891 6.8e-13 78.2 198 26.8
Duzib093G0662 Durio zibethinus HOM05D002704 ORTHO05D002891 8.9e-13 77.8 162 30.2
FAN18G1803 Fragaria x ananassa HOM05D002704 ORTHO05D002891 1.2e-12 77.4 146 32.9
Lj4C103T16 Lonicera japonica HOM05D002704 ORTHO05D002891 1.2e-12 77.4 175 31.4
Gohir.A05G226700 Gossypium hirsutum HOM05D002704 ORTHO05D002891 1.5e-12 77.0 184 28.8
Gorai.005G094000 Gossypium raimondii HOM05D002704 ORTHO05D002891 1.5e-12 77.0 174 29.9
Gorai.009G237500 Gossypium raimondii HOM05D002704 ORTHO05D002891 1.5e-12 77.0 186 30.1
Potri.005G165300 Populus trichocarpa HOM05D002704 ORTHO05D002891 1.5e-12 77.0 148 29.7
Prupe.1G516300 Prunus persica HOM05D002704 ORTHO05D002891 1.5e-12 77.0 189 31.2
Duzib041G0800 Durio zibethinus HOM05D002704 ORTHO05D002891 2.0e-12 76.6 159 30.2
Gohir.A02G076100 Gossypium hirsutum HOM05D002704 ORTHO05D002891 2.0e-12 76.6 137 30.7
Nn5g30117 Nelumbo nucifera HOM05D002704 ORTHO05D002891 2.0e-12 76.6 160 30.0
Thecc.08G107400 Theobroma cacao HOM05D002704 ORTHO05D002891 2.0e-12 76.6 146 30.1
HPP92_011168 Vanilla planifolia HOM05D002704 ORTHO05D002891 2.0e-12 76.6 142 29.6
Gohir.D05G229400 Gossypium hirsutum HOM05D002704 ORTHO05D002891 2.6e-12 76.3 186 30.1
Os12g0233100 Oryza sativa ssp. japonica HOM05D002704 ORTHO05D002891 3.4e-12 75.9 112 40.2
Ah.05g170030 Amaranthus hybridus HOM05D002704 ORTHO05D002891 4.4e-12 75.5 174 30.5
Gohir.D02G083400 Gossypium hirsutum HOM05D002704 ORTHO05D002891 4.4e-12 75.5 151 30.5
Hund16912 Selenicereus undatus HOM05D002704 ORTHO05D002891 5.8e-12 75.1 157 28.7
Cpa.g.sc36.127 Carica papaya HOM05D002704 ORTHO05D002891 7.5e-12 74.7 186 26.9
DCAR_029361 Daucus carota HOM05D002704 ORTHO05D002891 7.5e-12 74.7 166 28.3
Zm00001eb006930 Zea mays HOM05D002704 ORTHO05D002891 7.5e-12 74.7 140 30.7
CANSAT25G0913 Cannabis sativa HOM05D002704 ORTHO05D002891 1.3e-11 73.9 219 25.1
CAN.G101.15 Capsicum annuum HOM05D002704 ORTHO05D002891 1.3e-11 73.9 175 29.7
CDE04G0076 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 1.7e-11 73.6 157 29.9
Peaxi162Scf00041g00165 Petunia axillaris HOM05D002704 ORTHO05D002891 1.7e-11 73.6 134 30.6
Hund26960 Selenicereus undatus HOM05D002704 ORTHO05D002891 1.7e-11 73.6 152 28.3
Dinv44770 Davidia involucrata HOM05D002704 ORTHO05D002891 2.2e-11 73.2 146 31.5
Nitab4.5_0000232g0230 Nicotiana tabacum HOM05D002704 ORTHO05D002891 2.2e-11 73.2 152 30.9
TAR381G1126 Trochodendron aralioides HOM05D002704 ORTHO05D002891 2.2e-11 73.2 147 30.6
CiPaw.08G044800 Carya illinoinensis HOM05D002704 ORTHO05D002891 2.9e-11 72.8 158 28.5
HanXRQChr15g0491861 Helianthus annuus HOM05D002704 ORTHO05D002891 2.9e-11 72.8 152 31.6
Oeu012923.1 Olea europaea HOM05D002704 ORTHO05D002891 2.9e-11 72.8 173 30.1
Sc23g0000210 Simmondsia chinensis HOM05D002704 ORTHO05D002891 2.9e-11 72.8 197 25.9
TAR625G1386 Trochodendron aralioides HOM05D002704 ORTHO05D002891 4.9e-11 72.0 191 26.7
Cc10_g07250 Coffea canephora HOM05D002704 ORTHO05D002891 6.4e-11 71.6 183 27.3
Haze_22261 Corylus avellana HOM05D002704 ORTHO05D002891 6.4e-11 71.6 156 27.6
AUR62027750 Chenopodium quinoa HOM05D002704 ORTHO05D002891 8.3e-11 71.2 152 27.6
Nitab4.5_0000421g0060 Nicotiana tabacum HOM05D002704 ORTHO05D002891 8.3e-11 71.2 163 29.4
CSS0027836 Camellia sinensis var. sinensis HOM05D002704 ORTHO05D002891 1.1e-10 70.9 162 29.0
Duzib116G0617 Durio zibethinus HOM05D002704 ORTHO05D002891 1.1e-10 70.9 149 31.5
Actinidia10319 Actinidia chinensis HOM05D002704 ORTHO05D002891 1.9e-10 70.1 186 28.5
Psat2g072240 Pisum sativum HOM05D002704 ORTHO05D002891 1.9e-10 70.1 177 31.6
COL.COLO4_16406 Corchorus olitorius HOM05D002704 ORTHO05D002891 2.4e-10 69.7 161 26.1
Sabra02G0075700 Salix brachista HOM05D002704 ORTHO05D002891 2.4e-10 69.7 148 28.4
PSO210G1059 Papaver somniferum HOM05D002704 ORTHO05D002891 3.2e-10 69.3 157 30.6
MSTRG.22153 Avicennia marina HOM05D002704 ORTHO05D002891 4.1e-10 68.9 181 28.2
Eucgr.B00020 Eucalyptus grandis HOM05D002704 ORTHO05D002891 5.4e-10 68.6 154 28.6
Hma1.2p1_0237F.1_g099460 Hydrangea macrophylla HOM05D002704 ORTHO05D002891 5.4e-10 68.6 163 30.1
Oeu046295.1 Olea europaea HOM05D002704 ORTHO05D002891 7.1e-10 68.2 189 29.1
Eucgr.F02409 Eucalyptus grandis HOM05D002704 ORTHO05D002891 9.2e-10 67.8 155 28.4
PSO447G0371 Papaver somniferum HOM05D002704 ORTHO05D002891 9.2e-10 67.8 158 31.6
Sc01g0000430 Simmondsia chinensis HOM05D002704 ORTHO05D002891 3.5e-09 65.9 171 26.3
Ca_05274_v3 Cicer arietinum L. HOM05D002704 ORTHO05D002891 4.6e-09 65.5 195 26.7
Potri.002G096100 Populus trichocarpa HOM05D002704 ORTHO05D002891 6.0e-09 65.1 166 25.9
QL12p036715 Quercus lobata HOM05D002704 ORTHO05D002891 6.0e-09 65.1 147 27.2
Os03g0191200 Oryza sativa ssp. japonica HOM05D002704 ORTHO05D002891 2.3e-08 63.2 161 26.7
Actinidia27183 Actinidia chinensis HOM05D002704 ORTHO05D002891 3.0e-08 62.8 174 25.3
MSTRG.24460 Avicennia marina HOM05D002704 ORTHO05D002891 3.0e-08 62.8 149 26.2
vmacro21275 Vaccinium macrocarpon HOM05D002704 ORTHO05D002891 6.6e-08 61.6 156 26.9
Rhsim06G0082500 Rhododendron simsii HOM05D002704 ORTHO05D002891 8.6e-08 61.2 170 26.5
Zm00001eb401340 Zea mays HOM05D002704 ORTHO05D002891 8.6e-08 61.2 135 29.6
MBI01_g34424_MAGBIO Magnolia biondii HOM05D001667 ORTHO05D001508 1.9e-07 60.1 157 31.8
Nn1g05351 Nelumbo nucifera HOM05D002704 ORTHO05D002891 1.9e-07 60.1 169 25.4
TAR633G2309 Trochodendron aralioides HOM05D001667 ORTHO05D001508 7.3e-07 58.2 129 31.8
Lj1g0002648 Lotus japonicus HOM05D002704 ORTHO05D002891 2.1e-06 56.6 193 28.0
CDE12G0481 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 2.8e-06 56.2 130 29.2
ECA232G3648 Erigeron canadensis HOM05D002704 ORTHO05D000131 2.8e-06 56.2 84 35.7
PSO229G0040 Papaver somniferum HOM05D003968 ORTHO05D004077 3.6e-06 55.8 131 26.0
PGR004G2379 Punica granatum HOM05D001667 ORTHO05D001508 6.2e-06 55.1 128 30.5
Migut.N02898 Erythranthe guttata HOM05D002704 ORTHO05D002891 8.1e-06 54.7 150 25.3


User provided reference genes

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