Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 3.9e-41 171.0 86 100.0
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 3.1e-22 108.2 71 69.0
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 3.1e-22 108.2 71 70.4
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 3.1e-22 108.2 71 70.4
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 3.1e-22 108.2 71 70.4
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 5.9e-21 104.0 71 64.8
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 1.3e-20 102.8 72 65.3
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 1.7e-20 102.4 72 65.3
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 1.7e-20 102.4 72 65.3
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 5.0e-20 100.9 71 64.8
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 1.5e-19 99.4 72 62.5
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 3.2e-19 98.2 72 63.9
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 4.2e-19 97.8 71 64.8
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 5.5e-19 97.4 71 63.4
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 5.5e-19 97.4 72 63.9
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 5.5e-19 97.4 71 63.4
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 2.7e-18 95.1 71 62.0
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 2.7e-18 95.1 71 60.6
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 3.6e-18 94.7 72 61.1
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 3.6e-18 94.7 70 62.9
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 4.7e-18 94.4 71 59.2
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 4.7e-18 94.4 71 62.0
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 6.1e-18 94.0 71 60.6
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 8.0e-18 93.6 71 59.2
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 8.0e-18 93.6 118 45.8
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 1.0e-17 93.2 71 57.7
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 1.0e-17 93.2 71 57.7
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 1.4e-17 92.8 71 60.6
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 1.4e-17 92.8 71 60.6
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 1.4e-17 92.8 70 60.0
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 1.8e-17 92.4 71 59.2
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 2.3e-17 92.0 71 59.2
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 2.3e-17 92.0 71 59.2
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 2.3e-17 92.0 71 60.6
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 2.3e-17 92.0 71 56.3
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 2.3e-17 92.0 71 60.6
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 2.3e-17 92.0 72 59.7
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 3.0e-17 91.7 71 57.7
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 3.0e-17 91.7 71 57.7
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 3.0e-17 91.7 71 57.7
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 3.0e-17 91.7 71 56.3
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 3.0e-17 91.7 71 57.7
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 4.0e-17 91.3 71 60.6
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 4.0e-17 91.3 72 55.6
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 4.0e-17 91.3 71 60.6
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 4.0e-17 91.3 71 60.6
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 5.2e-17 90.9 71 57.7
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 5.2e-17 90.9 71 57.7
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 5.2e-17 90.9 71 57.7
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 5.2e-17 90.9 72 55.6
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 6.8e-17 90.5 71 57.7
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 6.8e-17 90.5 71 54.9
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 6.8e-17 90.5 70 58.6
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 8.8e-17 90.1 71 57.7
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 8.8e-17 90.1 72 55.6
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 8.8e-17 90.1 82 53.7
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 1.2e-16 89.7 72 56.9
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 1.5e-16 89.4 71 56.3
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 1.5e-16 89.4 71 56.3
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 1.5e-16 89.4 71 56.3
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 2.0e-16 89.0 70 57.1
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 2.0e-16 89.0 71 56.3
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 2.0e-16 89.0 71 54.9
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 2.0e-16 89.0 71 54.9
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 2.0e-16 89.0 71 57.7
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 2.0e-16 89.0 71 57.7
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 2.6e-16 88.6 71 56.3
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 2.6e-16 88.6 71 56.3
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 2.6e-16 88.6 71 56.3
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 3.4e-16 88.2 72 56.9
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 3.4e-16 88.2 72 54.2
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 4.4e-16 87.8 71 56.3
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 4.4e-16 87.8 72 54.2
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 7.5e-16 87.0 71 57.7
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 9.8e-16 86.7 71 56.3
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 9.8e-16 86.7 71 56.3
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 1.3e-15 86.3 71 56.3
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 2.8e-15 85.1 78 53.8
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 3.7e-15 84.7 71 54.9
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 4.8e-15 84.3 70 54.3
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 6.3e-15 84.0 71 53.5
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 8.3e-15 83.6 70 55.7
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 1.1e-14 83.2 72 52.8
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 1.4e-14 82.8 71 52.1
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 1.4e-14 82.8 71 52.1
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 1.8e-14 82.4 100 44.0
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 1.8e-14 82.4 71 52.1
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 2.4e-14 82.0 71 53.5
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 2.4e-14 82.0 71 53.5
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 2.4e-14 82.0 71 53.5
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 5.4e-14 80.9 79 49.4
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 5.4e-14 80.9 71 50.7
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 1.2e-13 79.7 69 52.2
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 1.6e-13 79.3 70 52.9
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 1.6e-13 79.3 71 47.9
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 2.0e-13 79.0 71 47.9
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 2.7e-13 78.6 72 52.8
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 3.5e-13 78.2 71 50.7
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 6.6e-12 73.9 43 72.1
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 1.1e-11 73.2 42 73.8
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 3.3e-11 71.6 43 67.4
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 4.2e-11 71.2 68 48.5
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 5.5e-11 70.9 43 67.4
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 1.0e-09 66.6 43 67.4
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 2.0e-08 62.4 43 60.5


User provided reference genes

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