Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 2.1e-108 395.6 188 100.0
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 2.7e-58 229.2 345 41.2
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 5.0e-57 224.9 345 40.3
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 4.7e-55 218.4 341 40.2
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 8.0e-55 217.6 343 39.9
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 8.0e-55 217.6 344 39.5
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.4e-54 216.9 345 39.7
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.4e-54 216.9 345 39.7
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 1.8e-54 216.5 341 39.9
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 4.0e-54 215.3 345 39.1
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 8.9e-54 214.2 300 41.3
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 8.9e-54 214.2 344 38.7
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 8.9e-54 214.2 344 38.7
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 1.5e-53 213.4 344 38.4
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 2.0e-53 213.0 347 38.9
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 2.6e-53 212.6 344 37.8
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 4.4e-53 211.8 340 38.5
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 4.4e-53 211.8 340 39.1
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 4.4e-53 211.8 345 38.6
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 5.7e-53 211.5 345 38.6
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 7.5e-53 211.1 344 38.7
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 9.8e-53 210.7 340 39.4
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 2.9e-52 209.1 343 37.9
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 3.7e-52 208.8 345 38.3
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 6.4e-52 208.0 347 38.3
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 6.4e-52 208.0 340 38.5
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 8.3e-52 207.6 344 38.4
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 1.1e-51 207.2 344 37.8
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 1.4e-51 206.8 345 37.4
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 1.4e-51 206.8 340 38.5
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 1.8e-51 206.5 344 37.8
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 2.4e-51 206.1 343 37.6
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 2.4e-51 206.1 344 38.1
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 2.4e-51 206.1 362 36.7
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 3.2e-51 205.7 346 36.7
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 4.1e-51 205.3 344 37.8
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 5.4e-51 204.9 340 38.2
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 7.0e-51 204.5 340 37.6
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 7.0e-51 204.5 344 38.7
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 1.2e-50 203.8 340 38.2
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 1.6e-50 203.4 340 37.9
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 1.6e-50 203.4 340 37.9
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 1.6e-50 203.4 347 37.5
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 2.0e-50 203.0 345 38.0
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 2.7e-50 202.6 343 37.0
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 2.7e-50 202.6 347 36.9
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 3.5e-50 202.2 340 37.9
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 4.6e-50 201.8 340 38.5
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 5.9e-50 201.4 186 57.5
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 1.0e-49 200.7 344 37.5
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 1.0e-49 200.7 344 37.5
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 1.0e-49 200.7 344 37.5
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 1.0e-49 200.7 340 37.4
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 1.3e-49 200.3 343 37.0
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 1.3e-49 200.3 343 37.0
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 1.7e-49 199.9 343 37.0
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 2.3e-49 199.5 343 36.4
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 2.3e-49 199.5 343 36.2
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 3.0e-49 199.1 344 37.5
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 3.9e-49 198.7 344 37.5
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 3.9e-49 198.7 344 36.3
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 5.0e-49 198.4 192 55.7
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 5.0e-49 198.4 337 37.7
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 6.6e-49 198.0 346 36.4
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 6.6e-49 198.0 340 37.4
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 6.6e-49 198.0 344 36.9
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 6.6e-49 198.0 343 37.3
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 6.6e-49 198.0 339 36.6
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 8.6e-49 197.6 343 37.3
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 8.6e-49 197.6 362 35.9
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 1.5e-48 196.8 344 36.9
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 1.9e-48 196.4 346 36.7
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 2.5e-48 196.1 344 36.9
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 3.3e-48 195.7 336 37.2
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 5.6e-48 194.9 344 36.0
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 7.3e-48 194.5 343 36.7
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 7.3e-48 194.5 340 37.4
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 9.5e-48 194.1 346 35.8
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 1.6e-47 193.4 345 35.9
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 2.1e-47 193.0 358 35.8
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 3.6e-47 192.2 343 35.9
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 3.6e-47 192.2 354 35.3
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 1.1e-46 190.7 344 35.8
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.4e-46 190.3 345 35.4
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 1.4e-46 190.3 352 35.2
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 1.8e-46 189.9 343 35.9
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 3.1e-46 189.1 346 35.5
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 3.1e-46 189.1 343 35.3
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 6.8e-46 188.0 233 45.9
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 1.2e-45 187.2 230 47.4
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 2.0e-45 186.4 234 47.0
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 3.4e-45 185.7 210 49.0
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 7.5e-45 184.5 227 46.7
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 9.8e-45 184.1 231 45.9
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 9.8e-45 184.1 230 46.1
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 9.8e-45 184.1 230 46.1
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 1.3e-44 183.7 345 35.1
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 2.2e-44 183.0 340 34.7
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 3.7e-44 182.2 227 46.7
Atru.chr6.2977 Acer truncatum HOM05D005273 ORTHO05D006195 1.9e-43 179.9 179 55.3
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 2.4e-43 179.5 343 35.6
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 3.2e-43 179.1 232 44.4
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 7.0e-43 177.9 247 42.5
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 1.2e-42 177.2 211 46.9
BolC1t01684H Brassica oleracea HOM05D005273 ORTHO05D006195 1.6e-42 176.8 230 43.9
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 4.6e-42 175.3 231 44.2
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 6.0e-42 174.9 340 34.4
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 6.0e-42 174.9 318 35.2
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 6.0e-42 174.9 227 44.1
AUR62011723 Chenopodium quinoa HOM05D005273 ORTHO05D006195 5.0e-41 171.8 232 43.1
AUR62024621 Chenopodium quinoa HOM05D005273 ORTHO05D006195 3.3e-40 169.1 231 43.3
Actinidia11084 Actinidia chinensis HOM05D005273 ORTHO05D006195 5.6e-40 168.3 120 69.2
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 9.5e-40 167.5 207 45.9
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 1.6e-39 166.8 302 36.8
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 3.6e-39 165.6 213 43.2
Peaxi162Scf00112g00110 Petunia axillaris HOM05D005273 ORTHO05D006195 8.9e-38 161.0 115 68.7
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 2.6e-37 159.5 285 36.1
Lj1A718G26 Lonicera japonica HOM05D005273 ORTHO05D006195 3.4e-37 159.1 116 69.0
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 1.9e-35 153.3 344 31.7
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 7.1e-35 151.4 339 31.0
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 9.5e-32 141.0 334 29.3
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 4.7e-31 138.7 226 38.1
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.7e-28 130.2 293 32.4
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 2.9e-28 129.4 209 37.3
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.3e-25 120.6 205 39.0
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 5.6e-24 115.2 317 28.7
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 4.7e-23 112.1 219 31.1
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 3.4e-21 105.9 215 33.0
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 9.3e-19 97.8 335 25.1
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 3.4e-13 79.3 170 32.4
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 7.6e-13 78.2 133 36.1
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 2.2e-12 76.6 170 31.2
Lj5A796T26 Lonicera japonica HOM05D005273 ORTHO05D006195 1.1e-11 74.3 42 73.8
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 2.4e-11 73.2 56 55.4
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 4.2e-11 72.4 54 59.3
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 1.2e-10 70.9 118 37.3
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 1.6e-10 70.5 56 53.6
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 1.8e-09 67.0 56 50.0


User provided reference genes

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