Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007100.1 Olea europaea HOM05D000109 ORTHO05D292020 6.6e-148 527.3 264 100.0
Hma1.2p1_0612F.1_g188930 Hydrangea macrophylla HOM05D000109 ORTHO05D000520 2.4e-12 77.0 73 57.5
Sopen04g036240 Solanum pennellii HOM05D000109 ORTHO05D000520 6.9e-12 75.5 75 58.7
Oeu019564.1 Olea europaea HOM05D000109 ORTHO05D000520 9.0e-12 75.1 75 60.0
Peaxi162Scf00680g00117 Petunia axillaris HOM05D000109 ORTHO05D000520 1.5e-11 74.3 75 58.7
CAN.G311.139 Capsicum annuum HOM05D000109 ORTHO05D000520 2.0e-11 73.9 75 58.7
Nitab4.5_0009646g0010 Nicotiana tabacum HOM05D000109 ORTHO05D000520 4.5e-11 72.8 75 57.3
GSVIVG01013400001 Vitis vinifera HOM05D000109 ORTHO05D000520 4.5e-11 72.8 73 54.8
PGSC0003DMG400009914 Solanum tuberosum HOM05D000109 ORTHO05D000520 5.9e-11 72.4 75 57.3
Migut.C00369 Erythranthe guttata HOM05D000109 ORTHO05D000520 7.6e-11 72.0 73 58.9
Solyc04g082610.3 Solanum lycopersicum HOM05D000109 ORTHO05D000520 7.6e-11 72.0 75 56.0
vmacro21784 Vaccinium macrocarpon HOM05D000109 ORTHO05D000520 7.6e-11 72.0 75 57.3
CSS0044131 Camellia sinensis var. sinensis HOM05D000109 ORTHO05D000520 1.0e-10 71.6 75 58.7
CANSAT25G0808 Cannabis sativa HOM05D000109 ORTHO05D000520 1.0e-10 71.6 75 56.0
Rhsim06G0004900 Rhododendron simsii HOM05D000109 ORTHO05D000520 1.0e-10 71.6 60 68.3
CSS0010837 Camellia sinensis var. sinensis HOM05D000109 ORTHO05D000520 1.3e-10 71.2 75 56.0
SalBow7G2831 Salvia bowleyana HOM05D000109 ORTHO05D000520 2.9e-10 70.1 73 56.2
CiPaw.07G135700 Carya illinoinensis HOM05D000109 ORTHO05D000520 3.8e-10 69.7 75 54.7
Cc10_g00440 Coffea canephora HOM05D000109 ORTHO05D000520 5.0e-10 69.3 73 53.4
Dinv31970 Davidia involucrata HOM05D000109 ORTHO05D000520 5.0e-10 69.3 75 54.7
SGA_v2.0_scaffold133G34585 Striga asiatica HOM05D000109 ORTHO05D000520 5.0e-10 69.3 73 56.2
FvH4_5g25730 Fragaria vesca HOM05D000109 ORTHO05D000520 8.5e-10 68.6 75 52.0
FAN08G1742 Fragaria x ananassa HOM05D000109 ORTHO05D000520 8.5e-10 68.6 75 52.0
FAN13G0482 Fragaria x ananassa HOM05D000109 ORTHO05D000520 8.5e-10 68.6 75 52.0
FAN18G2228 Fragaria x ananassa HOM05D000109 ORTHO05D000520 8.5e-10 68.6 75 52.0
MSTRG.24918 Avicennia marina HOM05D000109 ORTHO05D000520 1.1e-09 68.2 74 55.4
Cpa.g.sc26.162 Carica papaya HOM05D000109 ORTHO05D000520 1.1e-09 68.2 73 52.1
FAN04G1117 Fragaria x ananassa HOM05D000109 ORTHO05D000520 1.1e-09 68.2 75 52.0
Ciclev10000195m.g Citrus clementina HOM05D000109 ORTHO05D000520 1.4e-09 67.8 75 54.7
PGR031G0952 Punica granatum HOM05D000109 ORTHO05D000520 1.4e-09 67.8 75 53.3
CiPaw.08G075800 Carya illinoinensis HOM05D000109 ORTHO05D000520 2.5e-09 67.0 75 52.0
Lsat_1_v5_gn_2_641 Lactuca sativa HOM05D000109 ORTHO05D000520 2.5e-09 67.0 73 49.3
Lj4C7G10 Lonicera japonica HOM05D000109 ORTHO05D000520 2.5e-09 67.0 60 61.7
MD06G1006800 Malus domestica HOM05D000109 ORTHO05D000520 2.5e-09 67.0 75 52.0
Nn5g31009 Nelumbo nucifera HOM05D000109 ORTHO05D000520 3.2e-09 66.6 72 54.2
PGR031G2490 Punica granatum HOM05D000109 ORTHO05D000520 4.2e-09 66.2 75 52.0
Lalb_Chr23g0265651 Lupinus albus HOM05D000109 ORTHO05D000520 5.5e-09 65.9 75 54.7
Prupe.5G008300 Prunus persica HOM05D000109 ORTHO05D000520 5.5e-09 65.9 75 53.3
Nn6g31677 Nelumbo nucifera HOM05D000109 ORTHO05D000520 7.2e-09 65.5 73 49.3
RcHm_v2.0_Chr7g0216081 Rosa chinensis HOM05D000109 ORTHO05D000520 7.2e-09 65.5 73 49.3
THA.LOC104806915 Tarenaya hassleriana HOM05D000109 ORTHO05D000520 7.2e-09 65.5 74 52.7
Cfa014117 Carpinus fangiana HOM05D000109 ORTHO05D000520 1.2e-08 64.7 98 42.9
Manes.18G003400 Manihot esculenta HOM05D000109 ORTHO05D000520 1.2e-08 64.7 73 47.9
TAR381G1075 Trochodendron aralioides HOM05D000109 ORTHO05D000520 1.6e-08 64.3 75 52.0
ECA238G4626 Erigeron canadensis HOM05D000109 ORTHO05D000520 2.1e-08 63.9 73 45.2
COL.COLO4_37750 Corchorus olitorius HOM05D000109 ORTHO05D000520 2.7e-08 63.5 75 49.3
Potri.005G253800 Populus trichocarpa HOM05D000109 ORTHO05D000520 3.6e-08 63.2 75 50.7
QL02p015185 Quercus lobata HOM05D000109 ORTHO05D000520 3.6e-08 63.2 74 52.7
HanXRQChr06g0185231 Helianthus annuus HOM05D000109 ORTHO05D000520 4.6e-08 62.8 72 48.6
Sabra05G0196900 Salix brachista HOM05D000109 ORTHO05D000520 4.6e-08 62.8 75 50.7
Thecc.08G062900 Theobroma cacao HOM05D000109 ORTHO05D000520 6.1e-08 62.4 75 50.7
Atru.chr13.99 Acer truncatum HOM05D000109 ORTHO05D011090 7.9e-08 62.0 75 50.7
AT1G42540 Arabidopsis thaliana HOM05D000109 ORTHO05D000520 7.9e-08 62.0 59 55.9
Sabra02G0005700 Salix brachista HOM05D000109 ORTHO05D000520 7.9e-08 62.0 75 49.3
Carub.0001s3429 Capsella rubella HOM05D000109 ORTHO05D000520 1.0e-07 61.6 59 55.9
Aqoxy6G01594 Aquilegia oxysepala HOM05D000109 ORTHO05D000520 1.8e-07 60.8 72 47.2
DCAR_009863 Daucus carota HOM05D000109 ORTHO05D000520 1.8e-07 60.8 73 46.6
MBI08_g37957_MAGBIO Magnolia biondii HOM05D000109 ORTHO05D000520 1.8e-07 60.8 73 50.7
Sed0011414 Sechium edule HOM05D000109 ORTHO05D000520 1.8e-07 60.8 62 54.8
Aa31sc286G40 Aethionema arabicum HOM05D000109 ORTHO05D000520 2.3e-07 60.5 75 49.3
Sp1g37300 Schrenkiella parvula HOM05D000109 ORTHO05D000520 2.3e-07 60.5 59 55.9
TWI36G1764 Tripterygium wilfordii HOM05D000109 ORTHO05D000520 2.3e-07 60.5 75 52.0
BcaB04g17780 Brassica carinata HOM05D000109 ORTHO05D000520 3.0e-07 60.1 59 54.2
TWI56G0649 Tripterygium wilfordii HOM05D000109 ORTHO05D000520 3.0e-07 60.1 75 50.7
AL1G51370 Arabidopsis lyrata HOM05D000109 ORTHO05D000520 3.9e-07 59.7 59 54.2
arahy.Tifrunner.gnm1.ann1.V07PF1 Arachis hypogaea HOM05D000109 ORTHO05D000520 5.1e-07 59.3 59 52.5
arahy.Tifrunner.gnm1.ann1.W5RZU2 Arachis hypogaea HOM05D000109 ORTHO05D000520 5.1e-07 59.3 59 52.5
A08p07680 Brassica napus HOM05D000109 ORTHO05D000520 5.1e-07 59.3 59 54.2
VMungo1309G1085 Vigna mungo HOM05D000109 ORTHO05D000520 6.7e-07 58.9 75 50.7
EL10Ac1g01903 Beta vulgaris HOM05D000109 ORTHO05D000520 8.7e-07 58.5 73 45.2
DCAR_022988 Daucus carota HOM05D000109 ORTHO05D000520 8.7e-07 58.5 73 46.6
BcaC07g37455 Brassica carinata HOM05D000109 ORTHO05D000520 1.1e-06 58.2 59 52.5
C08p09260 Brassica napus HOM05D000109 ORTHO05D000520 1.1e-06 58.2 59 52.5
BolC8t47775H Brassica oleracea HOM05D000109 ORTHO05D000520 1.1e-06 58.2 59 52.5
BraA08t32782Z Brassica rapa HOM05D000109 ORTHO05D000520 1.1e-06 58.2 59 52.5
TAR626G1963 Trochodendron aralioides HOM05D000109 ORTHO05D000520 1.5e-06 57.8 99 47.5
Thhalv10003614m.g Eutrema salsugineum HOM05D000109 ORTHO05D000520 2.5e-06 57.0 59 52.5
Gohir.A05G178100 Gossypium hirsutum HOM05D000109 ORTHO05D000520 2.5e-06 57.0 59 52.5
Gohir.D05G181500 Gossypium hirsutum HOM05D000109 ORTHO05D000520 2.5e-06 57.0 59 52.5
Gorai.009G186500 Gossypium raimondii HOM05D000109 ORTHO05D000520 2.5e-06 57.0 59 52.5
Hund01789 Selenicereus undatus HOM05D000109 ORTHO05D000520 3.3e-06 56.6 75 49.3
Sopen01g054310 Solanum pennellii HOM05D000109 ORTHO05D000520 3.3e-06 56.6 72 50.0
vmacro12208 Vaccinium macrocarpon HOM05D000109 ORTHO05D000520 3.3e-06 56.6 75 50.7
Cfa005373 Carpinus fangiana HOM05D000109 ORTHO05D000520 4.3e-06 56.2 73 43.8
Lj1C761G13 Lonicera japonica HOM05D000109 ORTHO05D000520 4.3e-06 56.2 74 50.0
Phvul.009G006500 Phaseolus vulgaris HOM05D000109 ORTHO05D000520 4.3e-06 56.2 75 45.3
CsaV3_4G037470 Cucumis sativus L. HOM05D000109 ORTHO05D000520 7.4e-06 55.5 59 55.9
DCAR_021177 Daucus carota HOM05D000109 ORTHO05D000520 7.4e-06 55.5 75 49.3
Lsat_1_v5_gn_8_112560 Lactuca sativa HOM05D000109 ORTHO05D000520 7.4e-06 55.5 73 45.2
Medtr3g115910 Medicago truncatula HOM05D000109 ORTHO05D000520 7.4e-06 55.5 74 47.3
Ah.00g001070 Amaranthus hybridus HOM05D000109 ORTHO05D000520 9.7e-06 55.1 80 43.8
MSTRG.27883 Avicennia marina HOM05D000109 ORTHO05D000520 9.7e-06 55.1 73 45.2
ClCG11G018870 Citrullus lanatus HOM05D000109 ORTHO05D000520 9.7e-06 55.1 59 54.2
Nitab4.5_0000783g0110 Nicotiana tabacum HOM05D000109 ORTHO05D000520 9.7e-06 55.1 72 47.2
SGA_v2.0_scaffold131G34429 Striga asiatica HOM05D000109 ORTHO05D000520 9.7e-06 55.1 66 51.5


User provided reference genes

Program Settings