Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 1.4e-66 256.1 127 100.0
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 2.2e-40 169.1 113 72.6
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 9.3e-39 163.7 114 71.1
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 3.3e-36 155.2 113 68.1
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 1.3e-35 153.3 116 68.1
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 1.3e-35 153.3 116 68.1
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 1.6e-35 152.9 115 68.7
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 1.1e-34 150.2 115 66.1
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 5.3e-34 147.9 115 67.0
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 1.5e-33 146.4 113 67.3
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 3.4e-33 145.2 115 67.0
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 5.8e-33 144.4 115 67.0
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 7.6e-33 144.1 115 65.2
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 9.9e-33 143.7 115 63.5
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 2.9e-32 142.1 115 67.0
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 3.8e-32 141.7 109 66.1
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 6.4e-32 141.0 115 62.6
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 8.4e-32 140.6 115 65.2
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 8.4e-32 140.6 113 62.8
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 1.1e-31 140.2 115 62.6
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 1.9e-31 139.4 113 60.2
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.6e-30 136.3 112 60.7
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 2.1e-30 136.0 114 61.4
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 2.1e-30 136.0 114 61.4
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 4.6e-30 134.8 110 61.8
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 1.0e-29 133.7 112 62.5
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 1.3e-29 133.3 113 59.3
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 1.8e-29 132.9 112 59.8
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.8e-29 132.9 111 60.4
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 5.1e-29 131.3 113 61.1
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 5.1e-29 131.3 110 60.9
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 8.7e-29 130.6 115 60.0
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 2.5e-28 129.0 111 56.8
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 2.5e-28 129.0 111 58.6
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 3.3e-28 128.6 111 57.7
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 5.6e-28 127.9 113 55.8
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 1.3e-27 126.7 111 59.5
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 1.6e-27 126.3 113 54.0
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 2.8e-27 125.6 111 59.5
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 2.8e-27 125.6 113 55.8
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 1.1e-26 123.6 113 57.5
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 1.1e-26 123.6 110 58.2
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 1.4e-26 123.2 112 58.0
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 1.4e-26 123.2 113 55.8
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 1.4e-26 123.2 113 55.8
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 2.4e-26 122.5 113 56.6
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 2.4e-26 122.5 113 54.9
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 3.1e-26 122.1 111 57.7
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 3.1e-26 122.1 113 54.0
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 3.1e-26 122.1 113 57.5
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 3.1e-26 122.1 111 55.0
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 4.0e-26 121.7 114 55.3
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 5.3e-26 121.3 111 55.0
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 5.3e-26 121.3 110 58.2
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 6.9e-26 120.9 111 54.1
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 9.0e-26 120.6 112 57.1
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 1.5e-25 119.8 110 56.4
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 2.0e-25 119.4 113 54.9
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.6e-25 119.0 111 54.1
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 2.6e-25 119.0 113 53.1
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 2.6e-25 119.0 113 56.6
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 2.6e-25 119.0 111 54.1
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 3.4e-25 118.6 111 55.0
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 3.4e-25 118.6 117 52.1
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 3.4e-25 118.6 111 55.0
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 5.8e-25 117.9 110 55.5
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 5.8e-25 117.9 111 54.1
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 7.6e-25 117.5 110 55.5
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 1.0e-24 117.1 111 51.4
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 1.0e-24 117.1 111 51.4
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 1.0e-24 117.1 111 51.4
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 1.0e-24 117.1 117 52.1
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 1.0e-24 117.1 111 51.4
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 1.3e-24 116.7 111 53.2
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 1.3e-24 116.7 111 51.4
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 1.3e-24 116.7 111 51.4
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 2.2e-24 115.9 112 57.1
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 2.2e-24 115.9 110 53.6
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 3.8e-24 115.2 111 52.3
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 3.8e-24 115.2 111 52.3
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 6.5e-24 114.4 111 51.4
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 6.5e-24 114.4 113 48.7
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.9e-23 112.8 73 75.3
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 2.5e-23 112.5 81 69.1
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 5.5e-23 111.3 111 53.2
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 7.1e-23 110.9 111 50.5
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 1.2e-22 110.2 81 64.2
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 1.6e-22 109.8 124 47.6
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 4.6e-22 108.2 116 50.0
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 6.0e-22 107.8 113 50.4
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 8.7e-21 104.0 104 52.9
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 1.5e-20 103.2 111 48.6
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 7.4e-20 100.9 111 49.5
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 1.3e-19 100.1 102 52.0
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 8.2e-19 97.4 65 70.8
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 4.1e-18 95.1 66 68.2
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.0e-16 90.5 57 75.4
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 1.4e-15 86.7 110 41.8
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 2.1e-14 82.8 110 39.1
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 3.6e-14 82.0 102 46.1
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 3.6e-14 82.0 113 45.1
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 3.6e-14 82.0 111 45.0
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 3.4e-09 65.5 69 43.5
Rhsim10G0056400 Rhododendron simsii HOM05D007430 ORTHO05D009322 2.5e-07 59.3 53 62.3


User provided reference genes

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