Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007023.1 Olea europaea HOM05D004108 ORTHO05D004849 9.9e-77 290.0 147 100.0
MSTRG.24284 Avicennia marina HOM05D004108 ORTHO05D004849 1.1e-38 163.7 136 63.2
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 1.8e-38 162.9 150 60.0
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 1.0e-36 157.1 153 56.2
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 9.4e-35 150.6 149 54.4
Rhsim06G0031200 Rhododendron simsii HOM05D004108 ORTHO05D004849 6.7e-33 144.4 148 56.8
Nitab4.5_0002224g0100 Nicotiana tabacum HOM05D004108 ORTHO05D004849 1.5e-32 143.3 153 54.2
Migut.N00486 Erythranthe guttata HOM05D004108 ORTHO05D004849 7.5e-32 141.0 133 57.1
PGSC0003DMG400003688 Solanum tuberosum HOM05D004108 ORTHO05D004849 3.7e-31 138.7 138 54.3
Solyc04g080540.2 Solanum lycopersicum HOM05D004108 ORTHO05D004849 1.1e-30 137.1 138 54.3
Sopen04g034130 Solanum pennellii HOM05D004108 ORTHO05D004849 1.8e-30 136.3 138 54.3
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 2.0e-29 132.9 146 47.9
Potri.005G228600 Populus trichocarpa HOM05D004108 ORTHO05D004849 2.7e-29 132.5 146 46.6
Actinidia22531 Actinidia chinensis HOM05D004108 ORTHO05D004849 4.5e-29 131.7 139 53.2
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 7.7e-29 131.0 146 48.6
ATR0568G230 Amborella trichopoda HOM05D004108 ORTHO05D004849 1.3e-28 130.2 142 49.3
Ciclev10002766m.g Citrus clementina HOM05D004108 ORTHO05D004849 1.7e-28 129.8 151 48.3
CSS0043508 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 2.9e-28 129.0 141 50.4
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 2.9e-28 129.0 146 47.3
Gohir.D05G196000 Gossypium hirsutum HOM05D004108 ORTHO05D004849 3.8e-28 128.6 150 48.7
Gorai.009G200900 Gossypium raimondii HOM05D004108 ORTHO05D004849 3.8e-28 128.6 150 48.7
Hma1.2p1_0203F.1_g086230 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 5.0e-28 128.3 133 54.1
Gohir.A05G192800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 6.5e-28 127.9 150 48.7
CSS0044578 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 8.5e-28 127.5 142 50.7
DCAR_019539 Daucus carota HOM05D001676 ORTHO05D001539 4.2e-27 125.2 147 47.6
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 4.2e-27 125.2 153 47.1
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 5.5e-27 124.8 137 50.4
Ca_15505_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 1.6e-26 123.2 149 48.3
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 6.1e-26 121.3 150 47.3
GSVIVG01009730001 Vitis vinifera HOM05D004108 ORTHO05D004849 3.0e-25 119.0 135 48.1
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 4.0e-25 118.6 153 48.4
Ca_13362_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 8.8e-25 117.5 143 45.5
TWI56G1092 Tripterygium wilfordii HOM05D004108 ORTHO05D004849 8.8e-25 117.5 140 45.7
TAR381G0780 Trochodendron aralioides HOM05D004108 ORTHO05D004849 8.8e-25 117.5 119 52.1
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 1.2e-24 117.1 146 44.5
Medtr3g111970 Medicago truncatula HOM05D004108 ORTHO05D004849 1.5e-24 116.7 145 45.5
AUR62003937 Chenopodium quinoa HOM05D004108 ORTHO05D004849 3.4e-24 115.5 148 48.0
AUR62014478 Chenopodium quinoa HOM05D004108 ORTHO05D004849 3.4e-24 115.5 148 48.0
TPR.G20143 Trifolium pratense HOM05D004108 ORTHO05D004849 4.4e-24 115.2 135 46.7
MELO3C003817.2 Cucumis melo HOM05D004108 ORTHO05D004849 5.7e-24 114.8 145 50.3
CsaV3_3G045320 Cucumis sativus L. HOM05D004108 ORTHO05D004849 7.5e-24 114.4 145 50.3
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 7.5e-24 114.4 135 47.4
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 7.5e-24 114.4 149 44.3
Dinv36099 Davidia involucrata HOM05D004108 ORTHO05D004849 1.3e-23 113.6 117 55.6
Glyma.04G030900 Glycine max HOM05D004108 ORTHO05D004849 1.3e-23 113.6 145 45.5
Glyma.06G031000 Glycine max HOM05D004108 ORTHO05D004849 1.3e-23 113.6 145 45.5
TPR.G12369 Trifolium pratense HOM05D004108 ORTHO05D004849 1.7e-23 113.2 149 44.3
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 1.7e-23 113.2 154 46.1
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.8e-23 112.5 158 46.2
ClCG08G014950 Citrullus lanatus HOM05D004108 ORTHO05D004849 3.7e-23 112.1 149 45.0
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 3.7e-23 112.1 137 48.2
Psat6g008240 Pisum sativum HOM05D004108 ORTHO05D004849 3.7e-23 112.1 135 47.4
Lj1g0012803 Lotus japonicus HOM05D004108 ORTHO05D004849 4.8e-23 111.7 147 46.9
Lj5g0010725 Lotus japonicus HOM05D004108 ORTHO05D004849 6.3e-23 111.3 135 47.4
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 8.3e-23 110.9 137 47.4
Gorai.002G127100 Gossypium raimondii HOM05D004108 ORTHO05D004849 1.1e-22 110.5 148 44.6
Atru.chr13.446 Acer truncatum HOM05D004108 ORTHO05D004849 1.4e-22 110.2 138 44.9
Aqoxy5G01593 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 1.4e-22 110.2 143 44.8
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.4e-22 110.2 148 43.9
Potri.002G034500 Populus trichocarpa HOM05D004108 ORTHO05D004849 1.4e-22 110.2 134 44.0
RhsimUnG0051600 Rhododendron simsii HOM05D004108 ORTHO05D004849 1.4e-22 110.2 147 47.6
Cfa018174 Carpinus fangiana HOM05D004108 ORTHO05D004849 1.8e-22 109.8 136 44.1
MELO3C010952.2 Cucumis melo HOM05D004108 ORTHO05D004849 1.8e-22 109.8 153 46.4
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.8e-22 109.8 158 44.9
EL10Ac1g00610 Beta vulgaris HOM05D004108 ORTHO05D004849 2.4e-22 109.4 146 41.1
Rhsim07G0240700 Rhododendron simsii HOM05D004108 ORTHO05D004849 2.4e-22 109.4 135 49.6
Hund26890 Selenicereus undatus HOM05D004108 ORTHO05D004849 2.4e-22 109.4 144 43.8
Hund29908 Selenicereus undatus HOM05D004108 ORTHO05D004849 2.4e-22 109.4 144 43.8
Sc15g0007040 Simmondsia chinensis HOM05D004108 ORTHO05D004849 2.4e-22 109.4 145 46.2
Nitab4.5_0001759g0080 Nicotiana tabacum HOM05D004108 ORTHO05D004849 5.4e-22 108.2 104 59.6
Gorai.009G272400 Gossypium raimondii HOM05D004108 ORTHO05D004849 7.0e-22 107.8 151 47.0
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 1.2e-21 107.1 148 43.9
Gohir.D01G103300 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.6e-21 106.7 148 43.2
VMungo1309G0255 Vigna mungo HOM05D004108 ORTHO05D004849 1.6e-21 106.7 149 45.6
PGR083G0993 Punica granatum HOM05D004108 ORTHO05D004849 3.5e-21 105.5 146 43.2
Sabra02G0027700 Salix brachista HOM05D004108 ORTHO05D004849 4.5e-21 105.1 146 41.1
Sed0010517 Sechium edule HOM05D004108 ORTHO05D004849 4.5e-21 105.1 148 45.9
CsaV3_2G028830 Cucumis sativus L. HOM05D004108 ORTHO05D004849 5.9e-21 104.8 150 44.0
Glyma.06G031100 Glycine max HOM05D004108 ORTHO05D004849 1.0e-20 104.0 149 40.9
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 1.3e-20 103.6 146 44.5
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 1.7e-20 103.2 146 42.5
Medtr1g022395 Medicago truncatula HOM05D004108 ORTHO05D004849 2.9e-20 102.4 135 45.2
MBI10_g18267_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 6.6e-20 101.3 135 45.2
Phvul.009G058900 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 2.5e-19 99.4 154 42.2
CDE02G0765 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 3.3e-19 99.0 150 41.3
DCAR_020978 Daucus carota HOM05D004108 ORTHO05D004849 3.3e-19 99.0 129 43.4
CANSAT25G0460 Cannabis sativa HOM05D004108 ORTHO05D004849 5.5e-19 98.2 136 42.6
Cpa.g.sc31.39 Carica papaya HOM05D004108 ORTHO05D004849 5.5e-19 98.2 117 47.9
HanXRQChr05g0156841 Helianthus annuus HOM05D004108 ORTHO05D004849 7.2e-19 97.8 143 42.7
Haze_17929 Corylus avellana HOM05D004108 ORTHO05D004849 2.1e-18 96.3 116 44.0
Eucgr.F01583 Eucalyptus grandis HOM05D004108 ORTHO05D004849 2.8e-18 95.9 168 39.3
Lsat_1_v5_gn_5_27881 Lactuca sativa HOM05D004108 ORTHO05D004849 2.8e-18 95.9 147 39.5
PSO675G8146 Papaver somniferum HOM05D004108 ORTHO05D004849 2.8e-18 95.9 138 42.8
CDE06G1682 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 4.7e-18 95.1 158 39.9
Nn2g14293 Nelumbo nucifera HOM05D004108 ORTHO05D004849 4.7e-18 95.1 118 48.3
CANSAT25G1850 Cannabis sativa HOM05D004108 ORTHO05D004849 1.0e-17 94.0 138 44.2
unitig_899.g15617 Utricularia gibba HOM05D004108 ORTHO05D004849 1.8e-17 93.2 136 43.4
FAN15G0289 Fragaria x ananassa HOM05D004108 ORTHO05D004849 3.0e-17 92.4 150 40.7
PSO541G2330 Papaver somniferum HOM05D004108 ORTHO05D004849 5.2e-17 91.7 139 41.0
Rhsim06G0031500 Rhododendron simsii HOM05D004108 ORTHO05D004849 5.2e-17 91.7 116 47.4
HPP92_003110 Vanilla planifolia HOM05D004108 ORTHO05D004849 5.2e-17 91.7 141 41.8
Thhalv10009139m.g Eutrema salsugineum HOM05D004108 ORTHO05D004849 8.9e-17 90.9 137 43.8
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 8.9e-17 90.9 139 43.9
ECA246G2053 Erigeron canadensis HOM05D004108 ORTHO05D004849 1.2e-16 90.5 153 39.2
Peaxi162Scf00020g01711 Petunia axillaris HOM05D004108 ORTHO05D004849 1.2e-16 90.5 95 52.6
Actinidia38001 Actinidia chinensis HOM05D004108 ORTHO05D004849 2.0e-16 89.7 103 50.5
Lalb_Chr14g0369381 Lupinus albus HOM05D004108 ORTHO05D004849 2.0e-16 89.7 137 44.5
MBI18_g38882_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 2.0e-16 89.7 140 42.1
FAN27G1128 Fragaria x ananassa HOM05D004108 ORTHO05D004849 4.4e-16 88.6 152 41.4
Sp1g17400 Schrenkiella parvula HOM05D004108 ORTHO05D004849 7.5e-16 87.8 137 39.4
CARHR020100 Cardamine hirsuta HOM05D004108 ORTHO05D004849 3.7e-15 85.5 137 39.4
Carub.0001s1910 Capsella rubella HOM05D004108 ORTHO05D004849 4.9e-15 85.1 137 40.1
Lsat_1_v5_gn_4_117601 Lactuca sativa HOM05D004108 ORTHO05D004849 4.9e-15 85.1 140 40.7
FvH4_2g39630 Fragaria vesca HOM05D004108 ORTHO05D004849 6.3e-15 84.7 152 39.5
FAN20G2373 Fragaria x ananassa HOM05D004108 ORTHO05D004849 6.3e-15 84.7 152 38.8
CDE05G3574 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 1.1e-14 84.0 139 40.3
Peaxi162Scf00303g00058 Petunia axillaris HOM05D004108 ORTHO05D004849 1.1e-14 84.0 110 46.4
arahy.Tifrunner.gnm1.ann1.FG8SZ8 Arachis hypogaea HOM05D004108 ORTHO05D004849 3.1e-14 82.4 135 40.0
Prupe.1G377400 Prunus persica HOM05D004108 ORTHO05D004849 4.1e-14 82.0 136 38.2
MD08G1029700 Malus domestica HOM05D004108 ORTHO05D004849 5.4e-14 81.6 134 38.8
CDE11G1036 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 7.0e-14 81.3 144 39.6
AT1G19530 Arabidopsis thaliana HOM05D004108 ORTHO05D004849 2.7e-13 79.3 138 39.9
A06p15710 Brassica napus HOM05D004108 ORTHO05D004849 2.7e-13 79.3 137 38.0
arahy.Tifrunner.gnm1.ann1.9Q97AW Arachis hypogaea HOM05D004108 ORTHO05D004849 3.5e-13 79.0 147 38.1
ClCG05G018840 Citrullus lanatus HOM05D004108 ORTHO05D004849 3.5e-13 79.0 103 51.5
ECA232G2533 Erigeron canadensis HOM05D004108 ORTHO05D004849 3.5e-13 79.0 144 38.2
SEGI_30411 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 3.5e-13 79.0 136 39.7
AL1G32280 Arabidopsis lyrata HOM05D004108 ORTHO05D004849 4.5e-13 78.6 138 37.7
BcaC05g25839 Brassica carinata HOM05D004108 ORTHO05D004849 4.5e-13 78.6 137 36.5
BolC5t30510H Brassica oleracea HOM05D004108 ORTHO05D004849 4.5e-13 78.6 137 36.5
BcaB07g31980 Brassica carinata HOM05D004108 ORTHO05D004849 5.9e-13 78.2 137 36.5
RcHm_v2.0_Chr6g0301271 Rosa chinensis HOM05D004108 ORTHO05D004849 5.9e-13 78.2 142 38.7
Aa31LG7G4180 Aethionema arabicum HOM05D004108 ORTHO05D004849 7.8e-13 77.8 137 36.5
BraA06t24680Z Brassica rapa HOM05D004108 ORTHO05D004849 7.8e-13 77.8 137 37.2
PGSC0003DMG400005376 Solanum tuberosum HOM05D004108 ORTHO05D004849 7.8e-13 77.8 59 62.7
C05p18030 Brassica napus HOM05D004108 ORTHO05D004849 1.3e-12 77.0 137 35.8
AagrBONN_evm.TU.Sc2ySwM_344.1816 Anthoceros agrestis HOM05D004108 ORTHO05D004849 3.8e-12 75.5 153 38.6
CSS0033768 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 5.0e-12 75.1 56 66.1
Aqoxy3G01079 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 1.1e-11 73.9 133 36.1
AUR62014477 Chenopodium quinoa HOM05D004108 ORTHO05D004849 1.5e-11 73.6 57 66.7
HanXRQChr16g0501561 Helianthus annuus HOM05D004108 ORTHO05D004849 1.5e-11 73.6 135 37.0
Sc02g0005700 Simmondsia chinensis HOM05D004108 ORTHO05D004849 1.5e-11 73.6 56 64.3
Os03g0826800 Oryza sativa ssp. japonica HOM05D004108 ORTHO05D004849 2.5e-11 72.8 146 36.3
SEGI_02312 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 2.5e-11 72.8 147 35.4
arahy.Tifrunner.gnm1.ann1.KZM1SZ Arachis hypogaea HOM05D004108 ORTHO05D004849 4.3e-11 72.0 103 44.7
arahy.Tifrunner.gnm1.ann1.RL39CN Arachis hypogaea HOM05D004108 ORTHO05D004849 4.3e-11 72.0 103 44.7
Actinidia30825 Actinidia chinensis HOM05D004108 ORTHO05D004849 7.3e-11 71.2 51 64.7
Aqoxy3G01077 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 9.5e-11 70.9 134 35.8
SEGI_15325 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 9.5e-11 70.9 146 34.9
Hma1.2p1_0203F.1_g086240 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 1.6e-10 70.1 69 56.5
Pp3c16_7660 Physcomitrium patens HOM05D004108 ORTHO05D004849 2.1e-10 69.7 140 34.3
HPP92_010562 Vanilla planifolia HOM05D004108 ORTHO05D004849 6.1e-10 68.2 135 35.6
Glyma.18G124300 Glycine max HOM05D004108 ORTHO05D004849 8.0e-10 67.8 114 41.2
Mapoly0085s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.0e-09 67.4 132 30.3
Actinidia29817 Actinidia chinensis HOM05D004108 ORTHO05D004849 1.4e-09 67.0 40 77.5
Nitab4.5_0004768g0030 Nicotiana tabacum HOM05D004108 ORTHO05D004849 1.4e-09 67.0 105 42.9
unitig_747.g21673 Utricularia gibba HOM05D004108 ORTHO05D004849 5.2e-09 65.1 136 35.3
Mapoly0152s0035 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.2e-08 63.9 148 30.4
Mapoly0085s0006 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.0e-08 63.2 132 31.1
SMO348G0043 Selaginella moellendorffii HOM05D004108 ORTHO05D004849 2.6e-08 62.8 160 32.5
Mapoly0203s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 9.8e-08 60.8 135 35.6
Phvul.009G058800 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 1.3e-07 60.5 142 31.7
Mapoly0087s0044 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.7e-07 60.1 155 26.5
Mapoly0087s0045 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.9e-07 59.3 137 32.1
Mapoly0212s0008 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.9e-07 59.3 151 30.5
Pp3c20_22930 Physcomitrium patens HOM05D004108 ORTHO05D004849 2.4e-06 56.2 144 29.2
Mapoly0212s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 5.4e-06 55.1 135 28.9


User provided reference genes

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