Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007006.1 Olea europaea HOM05D005223 ORTHO05D006449 2.8e-194 681.8 349 100.0
MSTRG.11293 Avicennia marina HOM05D005223 ORTHO05D006449 2.2e-154 549.3 346 80.1
Dinv38469 Davidia involucrata HOM05D005223 ORTHO05D006449 2.0e-147 526.2 347 77.2
SalBow5G2547 Salvia bowleyana HOM05D005223 ORTHO05D006449 3.3e-147 525.4 344 77.6
Migut.I00475 Erythranthe guttata HOM05D005223 ORTHO05D006449 7.4e-147 524.2 347 76.9
CSS0037650 Camellia sinensis var. sinensis HOM05D005223 ORTHO05D006449 1.1e-145 520.4 347 76.1
Nitab4.5_0000955g0070 Nicotiana tabacum HOM05D005223 ORTHO05D006449 7.7e-144 514.2 348 73.0
SGA_v2.0_scaffold457G51932 Striga asiatica HOM05D005223 ORTHO05D006449 1.7e-143 513.1 350 75.1
Thecc.03G122800 Theobroma cacao HOM05D005223 ORTHO05D006449 3.8e-143 511.9 347 74.1
GSVIVG01007540001 Vitis vinifera HOM05D005223 ORTHO05D006449 6.5e-143 511.1 345 74.2
Hma1.2p1_0123F.1_g058130 Hydrangea macrophylla HOM05D005223 ORTHO05D006449 8.5e-143 510.8 350 73.7
Rhsim08G0185000 Rhododendron simsii HOM05D005223 ORTHO05D006449 2.1e-141 506.1 345 74.8
Peaxi162Scf00536g00422 Petunia axillaris HOM05D005223 ORTHO05D006449 3.6e-141 505.4 330 74.8
Cfa018892 Carpinus fangiana HOM05D005223 ORTHO05D006449 4.7e-141 505.0 346 73.4
Haze_07276 Corylus avellana HOM05D005223 ORTHO05D006449 1.4e-140 503.4 346 72.8
Nitab4.5_0002775g0020 Nicotiana tabacum HOM05D005223 ORTHO05D006449 1.4e-140 503.4 348 71.8
Cc04_g10370 Coffea canephora HOM05D005223 ORTHO05D006449 1.8e-140 503.1 342 73.4
Gorai.001G061400 Gossypium raimondii HOM05D005223 ORTHO05D006449 2.0e-139 499.6 347 71.8
Gohir.A07G053500 Gossypium hirsutum HOM05D005223 ORTHO05D006449 2.6e-139 499.2 347 72.0
Sopen10g002700 Solanum pennellii HOM05D005223 ORTHO05D006449 3.3e-139 498.8 348 70.4
PGSC0003DMG400025026 Solanum tuberosum HOM05D005223 ORTHO05D006449 3.3e-139 498.8 348 70.4
Gohir.D07G057900 Gossypium hirsutum HOM05D005223 ORTHO05D006449 5.7e-139 498.0 347 71.5
QL10p005060 Quercus lobata HOM05D005223 ORTHO05D006449 5.7e-139 498.0 346 73.1
Ciclev10018616m.g Citrus clementina HOM05D005223 ORTHO05D006449 9.7e-139 497.3 348 72.4
vmacro19239 Vaccinium macrocarpon HOM05D005223 ORTHO05D006449 2.8e-138 495.7 377 69.2
COL.COLO4_09267 Corchorus olitorius HOM05D005223 ORTHO05D006449 3.7e-138 495.4 350 71.7
Solyc10g006780.4 Solanum lycopersicum HOM05D005223 ORTHO05D006449 1.1e-137 493.8 344 70.9
DCAR_021603 Daucus carota HOM05D005223 ORTHO05D006449 2.4e-137 492.7 347 71.8
CANSAT80G2773 Cannabis sativa HOM05D005223 ORTHO05D006449 4.1e-137 491.9 347 71.5
TWI14G1297 Tripterygium wilfordii HOM05D005223 ORTHO05D006449 5.3e-137 491.5 347 71.8
TAR629G2346 Trochodendron aralioides HOM05D005223 ORTHO05D006449 2.7e-136 489.2 355 73.0
Lj9C475T6 Lonicera japonica HOM05D005223 ORTHO05D006449 3.5e-136 488.8 347 72.6
Manes.06G115300 Manihot esculenta HOM05D005223 ORTHO05D006449 1.3e-135 486.9 347 69.7
MD14G1163600 Malus domestica HOM05D005223 ORTHO05D006449 3.8e-135 485.3 348 72.7
Ca_16089_v3 Cicer arietinum L. HOM05D005223 ORTHO05D006449 8.5e-135 484.2 344 70.9
Glyma.04G193000 Glycine max HOM05D005223 ORTHO05D006449 8.5e-135 484.2 346 70.5
CAN.G1110.40 Capsicum annuum HOM05D005223 ORTHO05D006449 1.1e-134 483.8 348 71.3
SGA_v2.0_scaffold50G18602 Striga asiatica HOM05D005223 ORTHO05D006449 1.1e-134 483.8 350 72.6
MELO3C002332.2 Cucumis melo HOM05D005223 ORTHO05D006449 1.5e-134 483.4 347 69.7
Atru.chr9.1012 Acer truncatum HOM05D005223 ORTHO05D006449 1.9e-134 483.0 346 71.1
Prupe.5G157000 Prunus persica HOM05D005223 ORTHO05D006449 9.4e-134 480.7 346 70.5
ClCG03G003490 Citrullus lanatus HOM05D005223 ORTHO05D006449 3.6e-133 478.8 347 68.9
Potri.015G090700 Populus trichocarpa HOM05D005223 ORTHO05D006449 3.6e-133 478.8 347 70.0
Lalb_Chr08g0236961 Lupinus albus HOM05D005223 ORTHO05D006449 8.0e-133 477.6 347 70.0
Phvul.009G168800 Phaseolus vulgaris HOM05D005223 ORTHO05D006449 8.0e-133 477.6 347 70.3
CsaV3_1G009290 Cucumis sativus L. HOM05D005223 ORTHO05D006449 1.8e-132 476.5 347 68.9
Nn4g22461 Nelumbo nucifera HOM05D005223 ORTHO05D006449 1.8e-132 476.5 347 70.9
RcHm_v2.0_Chr7g0191161 Rosa chinensis HOM05D005223 ORTHO05D006449 4.0e-132 475.3 348 69.3
TPR.G13978 Trifolium pratense HOM05D005223 ORTHO05D006449 6.8e-132 474.6 347 69.7
Lj1g0000662 Lotus japonicus HOM05D005223 ORTHO05D006449 2.0e-131 473.0 347 69.7
HanXRQChr05g0154741 Helianthus annuus HOM05D005223 ORTHO05D006449 2.6e-131 472.6 346 68.2
FAN18G3380 Fragaria x ananassa HOM05D005223 ORTHO05D006449 7.5e-131 471.1 348 69.8
Hund18539 Selenicereus undatus HOM05D005223 ORTHO05D006449 1.3e-130 470.3 340 70.0
Sed0011232 Sechium edule HOM05D005223 ORTHO05D006449 2.2e-130 469.5 348 67.8
FAN13G2650 Fragaria x ananassa HOM05D005223 ORTHO05D006449 2.8e-130 469.2 348 69.3
arahy.Tifrunner.gnm1.ann1.D4E4RT Arachis hypogaea HOM05D005223 ORTHO05D006449 3.7e-130 468.8 350 69.1
FvH4_5g07490 Fragaria vesca HOM05D005223 ORTHO05D006449 3.7e-130 468.8 348 69.5
ECA246G2102 Erigeron canadensis HOM05D005223 ORTHO05D006449 4.8e-130 468.4 343 68.5
FAN04G2946 Fragaria x ananassa HOM05D005223 ORTHO05D006449 4.8e-130 468.4 348 69.3
Aqoxy5G03583 Aquilegia oxysepala HOM05D005223 ORTHO05D006449 6.3e-130 468.0 345 68.7
arahy.Tifrunner.gnm1.ann1.9N92ER Arachis hypogaea HOM05D005223 ORTHO05D006449 3.1e-129 465.7 351 68.9
Eucgr.L01337 Eucalyptus grandis HOM05D005223 ORTHO05D006449 4.1e-129 465.3 356 68.0
VMungo1309G0017 Vigna mungo HOM05D005223 ORTHO05D006449 1.2e-128 463.8 348 68.4
Sc10g0010350 Simmondsia chinensis HOM05D005223 ORTHO05D006449 2.7e-128 462.6 352 67.3
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 7.7e-128 461.1 322 72.0
Medtr3g075100 Medicago truncatula HOM05D005223 ORTHO05D006449 1.7e-127 459.9 347 67.4
PSO063G1058 Papaver somniferum HOM05D005223 ORTHO05D006449 3.8e-127 458.8 346 67.3
EL10Ac7g18074 Beta vulgaris HOM05D005223 ORTHO05D006449 1.1e-126 457.2 350 68.6
Lsat_1_v5_gn_5_13240 Lactuca sativa HOM05D005223 ORTHO05D006449 4.7e-125 451.8 332 67.8
AUR62001278 Chenopodium quinoa HOM05D005223 ORTHO05D006449 8.8e-124 447.6 352 67.0
PGR083G1937 Punica granatum HOM05D005223 ORTHO05D006449 2.6e-123 446.0 355 66.5
Aa31LG4G17060 Aethionema arabicum HOM05D005223 ORTHO05D006449 1.4e-121 440.3 358 64.5
Duzib084G0239 Durio zibethinus HOM05D005223 ORTHO05D006449 2.4e-121 439.5 345 66.1
Glyma.06G172900 Glycine max HOM05D005223 ORTHO05D006449 1.6e-120 436.8 305 70.8
CARHR157230 Cardamine hirsuta HOM05D005223 ORTHO05D006449 3.5e-120 435.6 358 63.7
CDE02G2587 Ceratophyllum demersum HOM05D005223 ORTHO05D006449 3.5e-120 435.6 347 64.3
AL5G27880 Arabidopsis lyrata HOM05D005223 ORTHO05D006449 7.8e-120 434.5 358 63.4
AT3G48470 Arabidopsis thaliana HOM05D005223 ORTHO05D006449 7.8e-120 434.5 359 62.7
THA.LOC104818196 Tarenaya hassleriana HOM05D005223 ORTHO05D006449 1.0e-119 434.1 351 64.4
Carub.0005s1465 Capsella rubella HOM05D005223 ORTHO05D006449 2.9e-119 432.6 358 63.1
AUR62025728 Chenopodium quinoa HOM05D005223 ORTHO05D006449 2.9e-119 432.6 352 65.3
Thhalv10010098m.g Eutrema salsugineum HOM05D005223 ORTHO05D006449 4.3e-118 428.7 351 63.2
Os02g0599100 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 4.3e-118 428.7 345 62.9
Sp5g13560 Schrenkiella parvula HOM05D005223 ORTHO05D006449 9.5e-118 427.6 358 62.3
BcaB02g10650 Brassica carinata HOM05D005223 ORTHO05D006449 1.2e-117 427.2 360 61.9
Os02g0598400 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 1.6e-117 426.8 345 62.6
Os02g0598800 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 1.6e-117 426.8 345 62.6
A06p27680 Brassica napus HOM05D005223 ORTHO05D006449 2.1e-117 426.4 357 63.0
C03p66340 Brassica napus HOM05D005223 ORTHO05D006449 2.1e-117 426.4 357 63.0
BolC3t18905H Brassica oleracea HOM05D005223 ORTHO05D006449 2.1e-117 426.4 357 63.0
BraA06t25704Z Brassica rapa HOM05D005223 ORTHO05D006449 4.7e-117 425.2 356 63.2
Zm00001eb246300 Zea mays HOM05D005223 ORTHO05D006449 6.1e-117 424.9 345 63.2
BcaC01g02344 Brassica carinata HOM05D005223 ORTHO05D006449 1.0e-116 424.1 357 63.0
ATR0824G104 Amborella trichopoda HOM05D005223 ORTHO05D006449 4.4e-115 418.7 352 62.5
Cpa.g.sc52.35 Carica papaya HOM05D005223 ORTHO05D006449 5.6e-110 401.7 347 62.5
SHI10647 Sapria himalayana HOM05D005223 ORTHO05D006449 7.8e-104 381.3 325 59.4
CiPaw.12G035700 Carya illinoinensis HOM05D005223 ORTHO05D006449 3.5e-96 355.9 235 77.0
Psat5g141880 Pisum sativum HOM05D005223 ORTHO05D006449 1.2e-88 330.9 237 70.9
Mapoly0075s0016 Marchantia polymorpha HOM05D005223 ORTHO05D006449 3.2e-73 279.6 366 43.7
Pp3c24_17160 Physcomitrium patens HOM05D005223 ORTHO05D006449 1.2e-72 277.7 367 44.4
Eucgr.B00148 Eucalyptus grandis HOM05D005223 ORTHO05D006449 4.3e-62 242.7 344 44.5
SMO367G0489 Selaginella moellendorffii HOM05D005223 ORTHO05D006449 5.6e-62 242.3 306 46.1
CBR_g45764 Chara braunii HOM05D005223 ORTHO05D006449 1.1e-46 191.4 314 38.5
CBR_g52378 Chara braunii HOM05D005223 ORTHO05D006449 5.7e-46 189.1 311 38.3
Nn8g40428 Nelumbo nucifera HOM05D005223 ORTHO05D006449 5.9e-35 152.5 123 64.2
Nn7g38107 Nelumbo nucifera HOM05D005223 ORTHO05D006449 3.2e-25 120.2 103 60.2
MD06G1153900 Malus domestica HOM05D005223 ORTHO05D006449 4.4e-22 109.8 104 59.6
Cre03.g186550 Chlamydomonas reinhardtii HOM05D005223 ORTHO05D006449 1.3e-18 98.2 329 27.1
DCAR_016747 Daucus carota HOM05D000329 ORTHO05D006449 9.8e-14 82.0 50 70.0
Nitab4.5_0004801g0040 Nicotiana tabacum HOM05D000112 ORTHO05D001327 4.5e-11 73.2 40 77.5
Actinidia19388 Actinidia chinensis HOM05D005223 ORTHO05D006449 6.8e-07 59.3 34 79.4


User provided reference genes

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