Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006937.1 Olea europaea HOM05D001781 ORTHO05D001711 7.8e-85 317.0 150 100.0
Oeu006942.1 Olea europaea HOM05D001781 ORTHO05D001711 4.3e-75 284.6 194 75.3
Oeu006941.1 Olea europaea HOM05D001781 ORTHO05D001711 1.3e-52 209.9 173 63.6
Oeu006936.1 Olea europaea HOM05D001781 ORTHO05D001711 1.1e-38 163.7 165 56.4
Oeu006925.1 Olea europaea HOM05D001781 ORTHO05D001711 2.7e-37 159.1 192 46.4
CAN.G309.58 Capsicum annuum HOM05D001781 ORTHO05D001711 1.9e-19 99.8 184 34.2
Solyc11g070070.3 Solanum lycopersicum HOM05D001781 ORTHO05D001711 2.5e-19 99.4 184 33.2
Sopen11g028750 Solanum pennellii HOM05D001781 ORTHO05D001711 7.4e-19 97.8 184 33.2
PGSC0003DMG400025515 Solanum tuberosum HOM05D001781 ORTHO05D001711 7.4e-19 97.8 184 33.2
Peaxi162Scf00591g00511 Petunia axillaris HOM05D001781 ORTHO05D001711 2.4e-17 92.8 175 34.9
Dinv36549 Davidia involucrata HOM05D001781 ORTHO05D001711 4.1e-17 92.0 202 32.7
Migut.K00116 Erythranthe guttata HOM05D001781 ORTHO05D001711 5.3e-17 91.7 187 31.6
Nitab4.5_0005411g0020 Nicotiana tabacum HOM05D001781 ORTHO05D001711 1.2e-16 90.5 181 33.7
Nitab4.5_0004188g0030 Nicotiana tabacum HOM05D001781 ORTHO05D001711 2.0e-16 89.7 186 32.8
Hma1.2p1_0665F.1_g199160 Hydrangea macrophylla HOM05D001781 ORTHO05D001711 2.6e-16 89.4 193 31.6
MSTRG.26142 Avicennia marina HOM05D001781 ORTHO05D001711 5.9e-16 88.2 177 32.2
Cc06_g08800 Coffea canephora HOM05D001781 ORTHO05D001711 2.5e-14 82.8 200 29.5
Prupe.7G239500 Prunus persica HOM05D001781 ORTHO05D001711 2.5e-14 82.8 184 29.3
SalBow1G3291 Salvia bowleyana HOM05D001781 ORTHO05D001711 2.5e-14 82.8 176 31.2
CSS0022836 Camellia sinensis var. sinensis HOM05D001781 ORTHO05D001711 4.2e-14 82.0 191 31.9
CSS0038934 Camellia sinensis var. sinensis HOM05D001781 ORTHO05D001711 4.2e-14 82.0 191 31.9
Actinidia40455 Actinidia chinensis HOM05D001781 ORTHO05D001711 7.2e-14 81.3 189 29.6
Lj4A461T9 Lonicera japonica HOM05D001781 ORTHO05D001711 9.3e-14 80.9 186 33.3
Actinidia22004 Actinidia chinensis HOM05D001781 ORTHO05D001711 1.2e-13 80.5 185 30.8
FAN23G0992 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.1e-11 73.9 197 28.4
Ciclev10008851m.g Citrus clementina HOM05D001781 ORTHO05D001711 1.5e-11 73.6 186 29.0
Rhsim01G0076800 Rhododendron simsii HOM05D001781 ORTHO05D001711 3.3e-11 72.4 185 30.8
vmacro20596 Vaccinium macrocarpon HOM05D001781 ORTHO05D001711 4.3e-11 72.0 179 30.2
FAN26G1253 Fragaria x ananassa HOM05D001781 ORTHO05D001711 9.7e-11 70.9 181 29.8
Hma1.2p1_0018F.1_g012670 Hydrangea macrophylla HOM05D001781 ORTHO05D001711 9.7e-11 70.9 192 28.6
MD02G1035700 Malus domestica HOM05D001781 ORTHO05D001711 1.3e-10 70.5 199 29.1
Phvul.003G162600 Phaseolus vulgaris HOM05D001781 ORTHO05D001711 1.3e-10 70.5 186 28.5
SGA_v2.0_scaffold273G46405 Striga asiatica HOM05D001781 ORTHO05D001711 1.7e-10 70.1 192 31.2
MD15G1175900 Malus domestica HOM05D001781 ORTHO05D001711 2.2e-10 69.7 193 28.5
Atru.chr7.1195 Acer truncatum HOM05D001781 ORTHO05D001711 2.8e-10 69.3 187 28.9
FvH4_1g03610 Fragaria vesca HOM05D001781 ORTHO05D001711 4.8e-10 68.6 183 30.1
FAN19G3215 Fragaria x ananassa HOM05D001781 ORTHO05D001711 4.8e-10 68.6 183 30.1
ClCG11G002860 Citrullus lanatus HOM05D001781 ORTHO05D001711 1.1e-09 67.4 178 28.1
RcHm_v2.0_Chr2g0089141 Rosa chinensis HOM05D001781 ORTHO05D001711 1.1e-09 67.4 185 30.3
FAN28G1355 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.4e-09 67.0 181 29.3
Potri.009G130600 Populus trichocarpa HOM05D001781 ORTHO05D001711 1.4e-09 67.0 185 28.1
CiPaw.03G241600 Carya illinoinensis HOM05D001781 ORTHO05D001711 1.8e-09 66.6 178 28.1
Sabra09G0101100 Salix brachista HOM05D001781 ORTHO05D001711 1.8e-09 66.6 185 28.6
TAR636G2048 Trochodendron aralioides HOM05D001781 ORTHO05D001711 2.4e-09 66.2 185 28.1
VMungo1215G1152 Vigna mungo HOM05D001781 ORTHO05D001711 2.4e-09 66.2 187 27.8
AUR62011086 Chenopodium quinoa HOM05D001781 ORTHO05D001711 3.1e-09 65.9 166 26.5
Oeu003481.1 Olea europaea HOM05D001781 ORTHO05D001711 3.1e-09 65.9 244 26.2
TWI34G1451 Tripterygium wilfordii HOM05D001781 ORTHO05D001711 3.1e-09 65.9 183 27.9
Duzib187G1560 Durio zibethinus HOM05D001781 ORTHO05D001711 4.1e-09 65.5 203 28.6
Glyma.05G008400 Glycine max HOM05D001781 ORTHO05D001711 5.3e-09 65.1 190 28.9
unitig_899.g15345 Utricularia gibba HOM05D005016 ORTHO05D005740 5.3e-09 65.1 165 32.1
Ca_21697_v3 Cicer arietinum L. HOM05D001781 ORTHO05D001711 9.1e-09 64.3 178 28.7
Oeu040381.1 Olea europaea HOM05D001781 ORTHO05D001711 9.1e-09 64.3 38 81.6
Hund21486 Selenicereus undatus HOM05D001781 ORTHO05D001711 9.1e-09 64.3 190 27.4
CsaV3_2G002700 Cucumis sativus L. HOM05D001781 ORTHO05D001711 1.2e-08 63.9 183 29.0
TWI63G0260 Tripterygium wilfordii HOM05D001781 ORTHO05D001711 1.2e-08 63.9 183 26.8
Lj4g0027268 Lotus japonicus HOM05D001781 ORTHO05D001711 1.5e-08 63.5 183 25.7
Manes.14G130400 Manihot esculenta HOM05D001781 ORTHO05D001711 2.0e-08 63.2 184 27.7
CANSAT11G0594 Cannabis sativa HOM05D001781 ORTHO05D001711 4.5e-08 62.0 194 27.3
MELO3C004524.2 Cucumis melo HOM05D001781 ORTHO05D001711 5.9e-08 61.6 192 28.6
Psat4g041760 Pisum sativum HOM05D001781 ORTHO05D001711 7.7e-08 61.2 175 27.4
Thecc.09G122900 Theobroma cacao HOM05D001781 ORTHO05D001711 7.7e-08 61.2 189 27.5
Lalb_Chr07g0178791 Lupinus albus HOM05D001781 ORTHO05D001711 1.0e-07 60.8 203 27.1
Nn2g11963 Nelumbo nucifera HOM05D001781 ORTHO05D001711 1.0e-07 60.8 193 27.5
AUR62033468 Chenopodium quinoa HOM05D001781 ORTHO05D001711 1.3e-07 60.5 137 28.5
Psat4g041560 Pisum sativum HOM05D001781 ORTHO05D001711 1.3e-07 60.5 166 26.5
Cfa003345 Carpinus fangiana HOM05D001781 ORTHO05D001711 1.7e-07 60.1 180 25.6
Eucgr.C04180 Eucalyptus grandis HOM05D001781 ORTHO05D001711 1.7e-07 60.1 181 25.4
COL.COLO4_05760 Corchorus olitorius HOM05D001781 ORTHO05D001711 2.2e-07 59.7 204 26.5
Lalb_Chr12g0197811 Lupinus albus HOM05D001781 ORTHO05D001711 2.2e-07 59.7 193 27.5
Psat0s4391g0080 Pisum sativum HOM05D001781 ORTHO05D001711 2.9e-07 59.3 180 28.9
PGR044G0682 Punica granatum HOM05D001781 ORTHO05D001711 3.8e-07 58.9 180 26.1
Psat4g040320 Pisum sativum HOM05D001781 ORTHO05D001711 5.0e-07 58.5 174 30.5
Sed0007229 Sechium edule HOM05D001781 ORTHO05D001711 1.9e-06 56.6 63 44.4
GSVIVG01015500001 Vitis vinifera HOM05D001781 ORTHO05D001711 1.9e-06 56.6 52 48.1
Cpa.g.c41482 Carica papaya HOM05D001781 ORTHO05D001711 2.5e-06 56.2 64 43.8
Cpa.g.sc75.57 Carica papaya HOM05D001781 ORTHO05D001711 2.5e-06 56.2 64 43.8
Glyma.17G116700 Glycine max HOM05D001781 ORTHO05D001711 2.5e-06 56.2 84 38.1
TAR625G1385 Trochodendron aralioides HOM05D001781 ORTHO05D001711 2.5e-06 56.2 64 45.3
Sed0027740 Sechium edule HOM05D001781 ORTHO05D001711 3.2e-06 55.8 63 44.4
Gohir.A07G034784 Gossypium hirsutum HOM05D001781 ORTHO05D001711 4.2e-06 55.5 50 48.0
Gohir.D07G038700 Gossypium hirsutum HOM05D001781 ORTHO05D001711 4.2e-06 55.5 50 48.0
Gorai.001G040700 Gossypium raimondii HOM05D001781 ORTHO05D001711 4.2e-06 55.5 50 48.0
Nn8g39386 Nelumbo nucifera HOM05D001781 ORTHO05D001711 7.2e-06 54.7 182 26.4
PGSC0003DMG400005394 Solanum tuberosum HOM05D001781 ORTHO05D001711 7.2e-06 54.7 42 52.4
PGSC0003DMG400043565 Solanum tuberosum HOM05D001781 ORTHO05D001711 7.2e-06 54.7 42 52.4


User provided reference genes

Program Settings