Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006910.1 Olea europaea HOM05D007325 ORTHO05D009251 5.5e-53 210.7 106 100.0
MD04G1183600 Malus domestica HOM05D007325 ORTHO05D009251 2.0e-10 69.3 81 50.6
MD12G1197000 Malus domestica HOM05D007325 ORTHO05D009251 4.4e-10 68.2 81 51.9
Oeu061920.1 Olea europaea HOM05D007325 ORTHO05D009251 7.6e-10 67.4 91 47.3
PGSC0003DMG400018232 Solanum tuberosum HOM05D007325 ORTHO05D009251 2.9e-09 65.5 99 42.4
Prupe.6G302100 Prunus persica HOM05D007325 ORTHO05D009251 3.8e-09 65.1 81 49.4
Dinv24533 Davidia involucrata HOM05D003267 ORTHO05D003955 6.4e-09 64.3 87 44.8
Lj5P313T22 Lonicera japonica HOM05D007325 ORTHO05D009251 1.1e-08 63.5 89 48.3
Carub.0006s2420 Capsella rubella HOM05D007325 ORTHO05D009251 2.4e-08 62.4 74 50.0
RcHm_v2.0_Chr3g0459051 Rosa chinensis HOM05D007325 ORTHO05D009251 2.4e-08 62.4 82 45.1
Cc02_g36910 Coffea canephora HOM05D007325 ORTHO05D009251 9.2e-08 60.5 79 49.4
Dinv30961 Davidia involucrata HOM05D007325 ORTHO05D009251 1.2e-07 60.1 86 45.3
FAN09G1210 Fragaria x ananassa HOM05D007325 ORTHO05D009251 1.2e-07 60.1 82 43.9
Gohir.D13G117300 Gossypium hirsutum HOM05D007325 ORTHO05D009251 1.2e-07 60.1 89 46.1
Sopen01g044880 Solanum pennellii HOM05D007325 ORTHO05D009251 1.2e-07 60.1 94 41.5
Gohir.A13G114400 Gossypium hirsutum HOM05D007325 ORTHO05D009251 1.6e-07 59.7 89 46.1
Gorai.013G131900 Gossypium raimondii HOM05D007325 ORTHO05D009251 1.3e-06 56.6 89 44.9
CANSAT54G2629 Cannabis sativa HOM05D007325 ORTHO05D009251 1.7e-06 56.2 82 42.7
Ciclev10030031m.g Citrus clementina HOM05D007325 ORTHO05D009251 1.7e-06 56.2 84 42.9
FAN14G5110 Fragaria x ananassa HOM05D007325 ORTHO05D009251 1.7e-06 56.2 54 53.7
THA.LOC104822290 Tarenaya hassleriana HOM05D007325 ORTHO05D009251 2.3e-06 55.8 73 46.6
Eucgr.H01350 Eucalyptus grandis HOM05D007325 ORTHO05D009251 3.0e-06 55.5 90 41.1
Lj1g0016832 Lotus japonicus HOM05D007325 ORTHO05D009251 3.0e-06 55.5 86 41.9
Potri.005G000700 Populus trichocarpa HOM05D007325 ORTHO05D009251 6.6e-06 54.3 70 44.3
Cfa004401 Carpinus fangiana HOM05D008494 ORTHO05D010021 8.6e-06 53.9 70 47.1
Manes.09G182800 Manihot esculenta HOM05D007325 ORTHO05D009251 8.6e-06 53.9 91 38.5
QL03p011419 Quercus lobata HOM05D007325 ORTHO05D009251 8.6e-06 53.9 47 59.6


User provided reference genes

Program Settings