Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006803.1 Olea europaea HOM05D004697 ORTHO05D006015 6.5e-70 267.3 138 100.0
Migut.D01039 Erythranthe guttata HOM05D004697 ORTHO05D006015 5.2e-43 177.9 103 86.4
Oeu021953.1 Olea europaea HOM05D004697 ORTHO05D006015 5.2e-43 177.9 103 85.4
SGA_v2.0_scaffold279G46822 Striga asiatica HOM05D004697 ORTHO05D006015 2.2e-41 172.6 103 83.5
Hma1.2p1_0682F.1_g202560 Hydrangea macrophylla HOM05D004697 ORTHO05D006015 8.3e-41 170.6 103 80.6
MSTRG.4725 Avicennia marina HOM05D004697 ORTHO05D006015 9.1e-40 167.2 103 80.6
Cc04_g03660 Coffea canephora HOM05D004697 ORTHO05D006015 1.6e-39 166.4 103 77.7
Actinidia08826 Actinidia chinensis HOM05D004697 ORTHO05D006015 2.0e-39 166.0 103 73.8
CiPaw.02G153000 Carya illinoinensis HOM05D004697 ORTHO05D006015 2.0e-39 166.0 103 79.6
TAR625G1470 Trochodendron aralioides HOM05D004697 ORTHO05D006015 2.7e-39 165.6 103 78.6
ECA232G0480 Erigeron canadensis HOM05D004697 ORTHO05D006015 3.5e-39 165.2 103 80.6
CSS0027866 Camellia sinensis var. sinensis HOM05D004697 ORTHO05D006015 4.5e-39 164.9 103 75.7
FAN02G0624 Fragaria x ananassa HOM05D004697 ORTHO05D006015 4.5e-39 164.9 103 79.6
Lj9C505T11 Lonicera japonica HOM05D004697 ORTHO05D006015 4.5e-39 164.9 103 80.6
FvH4_6g31270 Fragaria vesca HOM05D004697 ORTHO05D006015 5.9e-39 164.5 103 79.6
FAN09G1585 Fragaria x ananassa HOM05D004697 ORTHO05D006015 5.9e-39 164.5 103 78.6
FAN14G5909 Fragaria x ananassa HOM05D004697 ORTHO05D006015 5.9e-39 164.5 103 79.6
FAN05G1321 Fragaria x ananassa HOM05D004697 ORTHO05D006015 1.3e-38 163.3 103 78.6
FAN09G3067 Fragaria x ananassa HOM05D006908 ORTHO05D008662 1.3e-38 163.3 103 78.6
Lalb_Chr04g0262581 Lupinus albus HOM05D004697 ORTHO05D006015 1.3e-38 163.3 103 76.7
SalBow2G0681 Salvia bowleyana HOM05D004697 ORTHO05D006015 2.2e-38 162.5 103 78.6
Lj5A64T48 Lonicera japonica HOM05D004697 ORTHO05D006015 2.9e-38 162.2 97 82.5
Haze_16466 Corylus avellana HOM05D004697 ORTHO05D006015 3.8e-38 161.8 103 80.6
Manes.11G050800 Manihot esculenta HOM05D004697 ORTHO05D006015 3.8e-38 161.8 103 78.6
TAR626G0416 Trochodendron aralioides HOM05D004697 ORTHO05D006015 3.8e-38 161.8 103 76.7
CiPaw.01G241200 Carya illinoinensis HOM05D004697 ORTHO05D006015 5.0e-38 161.4 103 77.7
Nitab4.5_0002424g0030 Nicotiana tabacum HOM05D004697 ORTHO05D006015 5.0e-38 161.4 103 74.8
Peaxi162Scf00015g00230 Petunia axillaris HOM05D004697 ORTHO05D006015 5.0e-38 161.4 103 76.7
TAR383G0670 Trochodendron aralioides HOM05D004697 ORTHO05D006015 5.0e-38 161.4 103 77.7
Cfa002045 Carpinus fangiana HOM05D004697 ORTHO05D006015 6.5e-38 161.0 103 79.6
Sed0000376 Sechium edule HOM05D004697 ORTHO05D006015 6.5e-38 161.0 103 76.7
HanXRQChr16g0500731 Helianthus annuus HOM05D004697 ORTHO05D006015 8.5e-38 160.6 103 76.7
Cpa.g.sc18.109 Carica papaya HOM05D004697 ORTHO05D006015 1.1e-37 160.2 103 76.7
Ciclev10025775m.g Citrus clementina HOM05D004697 ORTHO05D006015 1.1e-37 160.2 103 74.8
Solyc03g120450.4 Solanum lycopersicum HOM05D004697 ORTHO05D006015 1.1e-37 160.2 103 74.8
Sopen03g039330 Solanum pennellii HOM05D004697 ORTHO05D006015 1.1e-37 160.2 103 74.8
MD09G1216600 Malus domestica HOM05D004697 ORTHO05D006015 1.5e-37 159.8 103 73.8
RcHm_v2.0_Chr2g0137261 Rosa chinensis HOM05D004697 ORTHO05D006015 1.5e-37 159.8 103 77.7
Lsat_1_v5_gn_4_104321 Lactuca sativa HOM05D004697 ORTHO05D006015 1.9e-37 159.5 103 75.7
PGR102G0607 Punica granatum HOM05D004697 ORTHO05D006015 1.9e-37 159.5 103 74.8
Dinv38068 Davidia involucrata HOM05D004697 ORTHO05D006015 2.5e-37 159.1 103 78.6
Nitab4.5_0005784g0020 Nicotiana tabacum HOM05D004697 ORTHO05D006015 2.5e-37 159.1 103 73.8
Potri.001G177000 Populus trichocarpa HOM05D004697 ORTHO05D006015 2.5e-37 159.1 103 76.7
Lj3g0021181 Lotus japonicus HOM05D004697 ORTHO05D006015 3.2e-37 158.7 103 73.8
TWI18G0273 Tripterygium wilfordii HOM05D004697 ORTHO05D006015 3.2e-37 158.7 103 75.7
MD17G1198700 Malus domestica HOM05D004697 ORTHO05D006015 5.5e-37 157.9 103 72.8
Rhsim12G0195700 Rhododendron simsii HOM05D004697 ORTHO05D006015 5.5e-37 157.9 103 72.8
GSVIVG01017171001 Vitis vinifera HOM05D004697 ORTHO05D006015 5.5e-37 157.9 103 74.8
Manes.04G120500 Manihot esculenta HOM05D004697 ORTHO05D006015 7.2e-37 157.5 103 77.7
AUR62011602 Chenopodium quinoa HOM05D004697 ORTHO05D006015 9.4e-37 157.1 103 75.7
AUR62016417 Chenopodium quinoa HOM05D004697 ORTHO05D006015 9.4e-37 157.1 103 75.7
Medtr4g011820 Medicago truncatula HOM05D004697 ORTHO05D006015 9.4e-37 157.1 103 73.8
Prupe.3G075300 Prunus persica HOM05D004697 ORTHO05D006015 9.4e-37 157.1 103 73.8
Eucgr.F02571 Eucalyptus grandis HOM05D004697 ORTHO05D006015 1.6e-36 156.4 103 72.8
Lalb_Chr25g0279581 Lupinus albus HOM05D004697 ORTHO05D006015 1.6e-36 156.4 103 72.8
Ca_20414_v3 Cicer arietinum L. HOM05D004697 ORTHO05D006015 2.7e-36 155.6 103 73.8
Glyma.13G361500 Glycine max HOM05D004697 ORTHO05D006015 2.7e-36 155.6 103 74.8
MBI04_g11925_MAGBIO Magnolia biondii HOM05D004697 ORTHO05D006015 6.1e-36 154.5 103 71.8
DCAR_016232 Daucus carota HOM05D004697 ORTHO05D006015 8.0e-36 154.1 103 73.8
Psat7g253520 Pisum sativum HOM05D004697 ORTHO05D006015 8.0e-36 154.1 103 71.8
CANSAT35G0283 Cannabis sativa HOM05D004697 ORTHO05D006015 1.0e-35 153.7 103 72.8
Glyma.15G012300 Glycine max HOM05D004697 ORTHO05D006015 1.0e-35 153.7 103 73.8
Thecc.06G081300 Theobroma cacao HOM05D004697 ORTHO05D006015 1.0e-35 153.7 103 74.8
CsaV3_7G032920 Cucumis sativus L. HOM05D004697 ORTHO05D006015 1.4e-35 153.3 103 70.9
arahy.Tifrunner.gnm1.ann1.3I1ZSD Arachis hypogaea HOM05D004697 ORTHO05D006015 1.8e-35 152.9 103 72.8
arahy.Tifrunner.gnm1.ann1.UVA1XC Arachis hypogaea HOM05D004697 ORTHO05D006015 1.8e-35 152.9 103 72.8
Gorai.009G132000 Gossypium raimondii HOM05D004697 ORTHO05D006015 1.8e-35 152.9 103 72.8
HPP92_000674 Vanilla planifolia HOM05D004697 ORTHO05D006015 2.3e-35 152.5 103 72.8
COL.COLO4_30318 Corchorus olitorius HOM05D004697 ORTHO05D006015 6.8e-35 151.0 103 70.9
Ah.01g021080 Amaranthus hybridus HOM05D004697 ORTHO05D006015 8.8e-35 150.6 100 74.0
ATR0071G006 Amborella trichopoda HOM05D004697 ORTHO05D006015 1.2e-34 150.2 103 71.8
Gohir.D05G127800 Gossypium hirsutum HOM05D004697 ORTHO05D006015 1.2e-34 150.2 103 71.8
Hund00582 Selenicereus undatus HOM05D004697 ORTHO05D006015 1.2e-34 150.2 103 68.9
PSO063G6298 Papaver somniferum HOM05D004697 ORTHO05D006015 2.0e-34 149.4 103 71.8
vmacro16936 Vaccinium macrocarpon HOM05D004697 ORTHO05D006015 3.4e-34 148.7 112 67.9
Gohir.A05G126900 Gossypium hirsutum HOM05D004697 ORTHO05D006015 4.4e-34 148.3 103 71.8
PSO782G4365 Papaver somniferum HOM05D004697 ORTHO05D006015 4.4e-34 148.3 103 71.8
Zm00001eb336900 Zea mays HOM05D004697 ORTHO05D006015 4.4e-34 148.3 103 67.0
VMungo1080G0743 Vigna mungo HOM05D004697 ORTHO05D006015 7.5e-34 147.5 103 70.9
Hund06596 Selenicereus undatus HOM05D004697 ORTHO05D006015 1.3e-33 146.7 105 71.4
Os01g0178000 Oryza sativa ssp. japonica HOM05D004697 ORTHO05D006015 2.8e-33 145.6 103 65.0
Aqoxy7G01886 Aquilegia oxysepala HOM05D004697 ORTHO05D006015 3.7e-33 145.2 103 68.0
Duzib235G0952 Durio zibethinus HOM05D004697 ORTHO05D006015 3.7e-33 145.2 131 60.3
THA.LOC104808212 Tarenaya hassleriana HOM05D004697 ORTHO05D006015 3.7e-33 145.2 103 68.0
Aa31LG4G630 Aethionema arabicum HOM05D004697 ORTHO05D006015 1.1e-32 143.7 103 68.9
Phvul.005G173300 Phaseolus vulgaris HOM05D004697 ORTHO05D006015 1.1e-32 143.7 103 69.9
Zm00001eb122460 Zea mays HOM05D004697 ORTHO05D006015 1.1e-32 143.7 103 67.0
Actinidia16015 Actinidia chinensis HOM05D004697 ORTHO05D006015 5.4e-32 141.4 100 67.0
QL05p025707 Quercus lobata HOM05D004697 ORTHO05D006015 2.0e-31 139.4 103 67.0
CDE01G0614 Ceratophyllum demersum HOM05D004697 ORTHO05D006015 4.5e-31 138.3 103 68.0
ClCG09G002390 Citrullus lanatus HOM05D004697 ORTHO05D006015 7.7e-31 137.5 136 52.9
BcaC08g45305 Brassica carinata HOM05D004697 ORTHO05D006015 1.0e-30 137.1 103 64.1
C06p29100 Brassica napus HOM05D004697 ORTHO05D006015 1.0e-30 137.1 103 64.1
BolC6t38073H Brassica oleracea HOM05D004697 ORTHO05D006015 1.0e-30 137.1 103 64.1
AT1G80360 Arabidopsis thaliana HOM05D004697 ORTHO05D006015 2.3e-30 136.0 103 64.1
Pp3c20_8270 Physcomitrium patens HOM05D004697 ORTHO05D006015 3.8e-30 135.2 98 67.3
Sp5g35450 Schrenkiella parvula HOM05D004697 ORTHO05D006015 6.6e-30 134.4 103 62.1
GSVIVG01035717001 Vitis vinifera HOM05D004697 ORTHO05D006015 6.6e-30 134.4 100 65.0
Nn2g11851 Nelumbo nucifera HOM05D004697 ORTHO05D006015 8.6e-30 134.0 80 81.2
BcaB02g07280 Brassica carinata HOM05D004697 ORTHO05D006015 1.5e-29 133.3 103 63.1
A02p23620 Brassica napus HOM05D004697 ORTHO05D006015 1.5e-29 133.3 103 62.1
BraA02t07355Z Brassica rapa HOM05D004697 ORTHO05D006015 1.5e-29 133.3 103 62.1
A07p26630 Brassica napus HOM05D004697 ORTHO05D006015 1.9e-29 132.9 103 63.1
BraA07t30306Z Brassica rapa HOM05D004697 ORTHO05D006015 1.9e-29 132.9 103 63.1
CARHR074150 Cardamine hirsuta HOM05D004697 ORTHO05D006015 1.9e-29 132.9 103 62.1
BcaC03g15980 Brassica carinata HOM05D004697 ORTHO05D006015 4.2e-29 131.7 103 61.2
C02p37380 Brassica napus HOM05D004697 ORTHO05D006015 4.2e-29 131.7 103 61.2
BolC2t09749H Brassica oleracea HOM05D004697 ORTHO05D006015 4.2e-29 131.7 103 61.2
Thhalv10018674m.g Eutrema salsugineum HOM05D004697 ORTHO05D006015 5.5e-29 131.3 103 61.2
Sabra01G0149200 Salix brachista HOM05D004697 ORTHO05D006015 7.2e-29 131.0 85 71.8
Thecc.09G144900 Theobroma cacao HOM05D004697 ORTHO05D006015 1.2e-28 130.2 100 63.0
AL2G41140 Arabidopsis lyrata HOM05D004697 ORTHO05D006015 1.6e-28 129.8 103 61.2
Carub.0002s2721 Capsella rubella HOM05D004697 ORTHO05D006015 6.1e-28 127.9 103 60.2
Dinv30209 Davidia involucrata HOM05D004697 ORTHO05D006015 8.0e-28 127.5 106 60.4
CSS0021419 Camellia sinensis var. sinensis HOM05D004697 ORTHO05D006015 1.8e-27 126.3 100 63.0
Mapoly0192s0009 Marchantia polymorpha HOM05D004697 ORTHO05D006015 1.8e-27 126.3 97 59.8
BcaB05g25274 Brassica carinata HOM05D004697 ORTHO05D006015 3.0e-27 125.6 104 60.6
unitig_62.g23774 Utricularia gibba HOM05D004697 ORTHO05D006015 3.0e-27 125.6 80 73.8
BcaB02g08691 Brassica carinata HOM05D004697 ORTHO05D006015 5.2e-27 124.8 103 59.2
SMO196G0040 Selaginella moellendorffii HOM05D004697 ORTHO05D006015 6.8e-27 124.4 93 66.7
A07p45300 Brassica napus HOM05D004697 ORTHO05D006015 8.9e-27 124.0 103 58.3
Dinv30207 Davidia involucrata HOM05D004697 ORTHO05D006015 1.2e-26 123.6 100 62.0
BcaC08g47581 Brassica carinata HOM05D004697 ORTHO05D006015 1.5e-26 123.2 103 58.3
BolC6t40428H Brassica oleracea HOM05D004697 ORTHO05D006015 1.5e-26 123.2 103 58.3
BraA07t32034Z Brassica rapa HOM05D004697 ORTHO05D006015 2.0e-26 122.9 103 57.3
EL10Ac9g21973 Beta vulgaris HOM05D004697 ORTHO05D006015 4.4e-26 121.7 82 75.6
Sc10g0005480 Simmondsia chinensis HOM05D004697 ORTHO05D006015 5.7e-26 121.3 68 83.8
arahy.Tifrunner.gnm1.ann1.08G0EU Arachis hypogaea HOM05D004697 ORTHO05D006015 2.2e-25 119.4 84 69.0
CANSAT25G3819 Cannabis sativa HOM05D004697 ORTHO05D006015 1.4e-24 116.7 100 56.0
C06p54160 Brassica napus HOM05D004697 ORTHO05D006015 1.0e-22 110.5 129 47.3
CAN.G438.43 Capsicum annuum HOM05D004697 ORTHO05D006015 1.0e-22 110.5 66 75.8
vmacro16938 Vaccinium macrocarpon HOM05D004697 ORTHO05D006015 1.1e-21 107.1 66 72.7
PGSC0003DMG400041984 Solanum tuberosum HOM05D004697 ORTHO05D006015 9.5e-21 104.0 63 71.4
SHI09701 Sapria himalayana HOM05D000105 ORTHO05D000023 6.1e-20 101.3 86 58.1
Rhsim06G0149600 Rhododendron simsii HOM05D004697 ORTHO05D000003 1.8e-19 99.8 82 58.5
vmacro05442 Vaccinium macrocarpon HOM05D004697 ORTHO05D006015 3.2e-16 89.0 63 65.1
Cre01.g051800 Chlamydomonas reinhardtii HOM05D004697 ORTHO05D006015 3.3e-13 79.0 96 45.8


User provided reference genes

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