Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006796.1 Olea europaea HOM05D005672 ORTHO05D003038 1.6e-64 249.2 118 100.0
SalBow2G2205 Salvia bowleyana HOM05D005672 ORTHO05D003038 1.6e-45 186.0 112 74.1
Migut.I00857 Erythranthe guttata HOM05D005672 ORTHO05D003038 3.1e-44 181.8 112 75.0
MSTRG.22696 Avicennia marina HOM05D005672 ORTHO05D003038 4.0e-44 181.4 119 71.4
Cc04_g03540 Coffea canephora HOM05D005672 ORTHO05D003038 2.1e-40 169.1 119 67.2
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 8.9e-36 153.7 121 59.5
Solyc06g066750.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 3.8e-34 148.3 129 53.5
Sopen06g025030 Solanum pennellii HOM05D005672 ORTHO05D003038 1.1e-33 146.7 128 53.9
PGSC0003DMG400016538 Solanum tuberosum HOM05D005672 ORTHO05D003038 1.4e-33 146.4 128 53.9
CAN.G395.17 Capsicum annuum HOM05D005672 ORTHO05D003038 1.9e-33 146.0 130 55.4
Nitab4.5_0000351g0210 Nicotiana tabacum HOM05D005672 ORTHO05D003038 5.4e-33 144.4 135 54.1
Nitab4.5_0002327g0030 Nicotiana tabacum HOM05D005672 ORTHO05D003038 3.5e-32 141.7 134 50.7
HanXRQChr14g0455911 Helianthus annuus HOM05D005672 ORTHO05D003038 3.9e-31 138.3 122 53.3
HanXRQChr10g0314951 Helianthus annuus HOM05D005672 ORTHO05D003038 1.6e-29 132.9 117 53.8
Actinidia32765 Actinidia chinensis HOM05D005672 ORTHO05D003038 1.8e-28 129.4 109 56.0
Actinidia01798 Actinidia chinensis HOM05D005672 ORTHO05D003038 5.2e-28 127.9 109 56.0
ECA234G3627 Erigeron canadensis HOM05D005672 ORTHO05D003038 1.5e-27 126.3 93 59.1
Lsat_1_v5_gn_5_129980 Lactuca sativa HOM05D005672 ORTHO05D003038 1.5e-27 126.3 128 48.4
unitig_21.g20351 Utricularia gibba HOM05D005672 ORTHO05D003038 5.8e-27 124.4 116 50.9
DCAR_016224 Daucus carota HOM05D005672 ORTHO05D003038 1.4e-25 119.8 100 52.0
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 1.6e-24 116.3 115 50.4
SGA_v2.0_scaffold5G02600 Striga asiatica HOM05D005672 ORTHO05D003038 1.6e-24 116.3 79 65.8
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 2.7e-24 115.5 109 50.5
Oeu019543.1 Olea europaea HOM05D005672 ORTHO05D003038 6.0e-24 114.4 99 60.6
CAN.G438.58 Capsicum annuum HOM05D005672 ORTHO05D003038 2.3e-23 112.5 123 51.2
vmacro18924 Vaccinium macrocarpon HOM05D005672 ORTHO05D003038 2.3e-23 112.5 124 48.4
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 3.0e-23 112.1 110 50.9
Prupe.3G072900 Prunus persica HOM05D005672 ORTHO05D003038 6.6e-23 110.9 117 48.7
Solyc03g120290.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 1.5e-22 109.8 120 50.8
Sopen03g039180 Solanum pennellii HOM05D005672 ORTHO05D003038 7.3e-22 107.5 123 50.4
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 1.3e-21 106.7 115 49.6
ECA232G2097 Erigeron canadensis HOM05D005672 ORTHO05D003038 2.8e-21 105.5 123 43.1
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 2.8e-21 105.5 102 48.0
TAR624G0127 Trochodendron aralioides HOM05D005672 ORTHO05D003038 2.8e-21 105.5 109 45.0
Peaxi162Scf00207g00940 Petunia axillaris HOM05D005672 ORTHO05D003038 3.6e-21 105.1 123 44.7
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 8.1e-21 104.0 107 45.8
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.1e-20 103.6 107 46.7
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 1.4e-20 103.2 116 44.0
Dinv30519 Davidia involucrata HOM05D005672 ORTHO05D003038 1.8e-20 102.8 90 60.0
Prupe.3G073800 Prunus persica HOM05D005672 ORTHO05D003038 2.4e-20 102.4 115 49.6
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 3.1e-20 102.1 105 45.7
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 1.2e-19 100.1 115 43.5
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 1.5e-19 99.8 115 43.5
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 1.5e-19 99.8 112 45.5
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 5.8e-19 97.8 114 48.2
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 1.7e-18 96.3 114 48.2
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 4.9e-18 94.7 110 42.7
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 4.9e-18 94.7 110 42.7
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 4.9e-18 94.7 110 42.7
DCAR_026309 Daucus carota HOM05D005672 ORTHO05D003038 8.4e-18 94.0 104 44.2
CSS0026145 Camellia sinensis var. sinensis HOM05D005672 ORTHO05D003038 2.4e-17 92.4 66 60.6
Hund25654 Selenicereus undatus HOM05D005672 ORTHO05D003038 2.4e-17 92.4 109 38.5
Ciclev10027568m.g Citrus clementina HOM05D005672 ORTHO05D003038 3.2e-17 92.0 107 46.7
Prupe.6G180200 Prunus persica HOM05D005672 ORTHO05D003038 5.4e-17 91.3 114 44.7
Prupe.3G072700 Prunus persica HOM05D005672 ORTHO05D003038 7.1e-17 90.9 114 44.7
QL05p025003 Quercus lobata HOM05D005672 ORTHO05D003038 1.6e-16 89.7 99 46.5
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 1.6e-16 89.7 113 46.9
Duzib192G0281 Durio zibethinus HOM05D005672 ORTHO05D003038 2.1e-16 89.4 102 45.1
Gorai.006G099200 Gossypium raimondii HOM05D005672 ORTHO05D003038 2.1e-16 89.4 106 42.5
Duzib192G0991 Durio zibethinus HOM05D005672 ORTHO05D003038 3.5e-16 88.6 106 42.5
Gohir.D09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 4.6e-16 88.2 106 42.5
Nn2g11778 Nelumbo nucifera HOM05D005672 ORTHO05D003038 7.9e-16 87.4 110 40.9
ClCG09G002230 Citrullus lanatus HOM05D005672 ORTHO05D003038 1.8e-15 86.3 108 38.9
MD17G1196900 Malus domestica HOM05D005672 ORTHO05D003038 3.0e-15 85.5 112 41.1
Sed0001381 Sechium edule HOM05D005672 ORTHO05D003038 6.7e-15 84.3 104 40.4
CsaV3_7G033060 Cucumis sativus L. HOM05D005672 ORTHO05D003038 1.1e-14 83.6 108 39.8
Dinv30521 Davidia involucrata HOM05D005672 ORTHO05D003038 1.5e-14 83.2 107 40.2
Thecc.06G054500 Theobroma cacao HOM05D005672 ORTHO05D003038 1.9e-14 82.8 106 41.5
Gohir.A09G083700 Gossypium hirsutum HOM05D005672 ORTHO05D003038 3.3e-14 82.0 86 43.0
Duzib192G0747 Durio zibethinus HOM05D005672 ORTHO05D003038 5.6e-14 81.3 113 40.7
Atru.chr1.3244 Acer truncatum HOM05D005672 ORTHO05D003038 1.6e-13 79.7 85 48.2
Nn8g39244 Nelumbo nucifera HOM05D005672 ORTHO05D003038 2.8e-13 79.0 102 45.1
Ciclev10027446m.g Citrus clementina HOM05D005672 ORTHO05D003038 3.7e-13 78.6 117 39.3
Prupe.3G072600 Prunus persica HOM05D005672 ORTHO05D003038 3.7e-13 78.6 103 38.8
Duzib235G0754 Durio zibethinus HOM05D005672 ORTHO05D003038 4.8e-13 78.2 83 41.0
CiPaw.02G152000 Carya illinoinensis HOM05D005672 ORTHO05D003038 6.2e-13 77.8 111 37.8
Manes.04G121900 Manihot esculenta HOM05D005672 ORTHO05D003038 6.2e-13 77.8 116 38.8
Manes.04G122000 Manihot esculenta HOM05D005672 ORTHO05D003038 6.2e-13 77.8 116 38.8
AT1G12663 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 1.4e-12 76.6 113 38.1
Manes.04G122100 Manihot esculenta HOM05D005672 ORTHO05D003038 1.8e-12 76.3 116 37.9
Nn8g39240 Nelumbo nucifera HOM05D005672 ORTHO05D003038 2.4e-12 75.9 103 41.7
AL1G24130 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 3.1e-12 75.5 114 39.5
FvH4_6g30990 Fragaria vesca HOM05D005672 ORTHO05D003038 3.1e-12 75.5 116 42.2
COL.COLO4_30353 Corchorus olitorius HOM05D005672 ORTHO05D003038 6.9e-12 74.3 74 45.9
Gohir.A09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 9.0e-12 73.9 118 34.7
MD09G1214600 Malus domestica HOM05D005672 ORTHO05D003038 9.0e-12 73.9 104 40.4
Gohir.D09G083500 Gossypium hirsutum HOM05D005672 ORTHO05D003038 1.2e-11 73.6 118 34.7
Nn8g39245 Nelumbo nucifera HOM05D005672 ORTHO05D003038 1.2e-11 73.6 118 37.3
Eucgr.J03009 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.5e-11 73.2 106 37.7
Gorai.006G099100 Gossypium raimondii HOM05D005672 ORTHO05D003038 2.6e-11 72.4 118 33.9
Sed0004960 Sechium edule HOM05D005672 ORTHO05D003038 2.6e-11 72.4 106 32.1
MELO3C023361.2 Cucumis melo HOM05D005672 ORTHO05D003038 7.6e-11 70.9 96 39.6
Nn8g39246 Nelumbo nucifera HOM05D005672 ORTHO05D003038 9.9e-11 70.5 73 43.8
Prupe.3G073000 Prunus persica HOM05D005672 ORTHO05D003038 1.3e-10 70.1 118 36.4
Ciclev10027444m.g Citrus clementina HOM05D005672 ORTHO05D003038 1.7e-10 69.7 113 42.5
Prupe.3G073200 Prunus persica HOM05D005672 ORTHO05D003038 1.7e-10 69.7 109 36.7
THA.LOC104823573 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 1.7e-10 69.7 109 35.8
Thhalv10023017m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 8.4e-10 67.4 115 39.1
Atru.chr1.3245 Acer truncatum HOM05D005672 ORTHO05D003038 1.1e-09 67.0 97 35.1
Aqoxy7G01810 Aquilegia oxysepala HOM05D005672 ORTHO05D003038 1.1e-09 67.0 117 36.8
PGSC0003DMG400002652 Solanum tuberosum HOM05D005672 ORTHO05D003038 3.2e-09 65.5 104 43.3
Ciclev10026803m.g Citrus clementina HOM05D005672 ORTHO05D003038 4.2e-09 65.1 114 36.8
Ciclev10027058m.g Citrus clementina HOM05D005672 ORTHO05D003038 5.5e-09 64.7 77 44.2
Nitab4.5_0000671g0010 Nicotiana tabacum HOM05D005672 ORTHO05D003038 1.6e-08 63.2 63 57.1
Nn8g39241 Nelumbo nucifera HOM05D005672 ORTHO05D003038 2.1e-08 62.8 111 36.0
Sp1g11270 Schrenkiella parvula HOM05D007482 ORTHO05D003038 2.1e-08 62.8 118 34.7
CARHR012950 Cardamine hirsuta HOM05D007482 ORTHO05D003038 2.7e-08 62.4 115 34.8
CARHR182820 Cardamine hirsuta HOM05D007482 ORTHO05D003038 2.7e-08 62.4 86 36.0
ClCG09G002220 Citrullus lanatus HOM05D005672 ORTHO05D003038 3.5e-08 62.0 92 34.8
PGR031G0360 Punica granatum HOM05D005672 ORTHO05D003038 3.5e-08 62.0 107 37.4
PGR031G3744 Punica granatum HOM05D005672 ORTHO05D003038 3.5e-08 62.0 107 37.4
CARHR012960 Cardamine hirsuta HOM05D007482 ORTHO05D003038 6.0e-08 61.2 113 32.7
ClCG09G002260 Citrullus lanatus HOM05D005672 ORTHO05D003038 7.9e-08 60.8 82 35.4
Duzib235G0878 Durio zibethinus HOM05D005672 ORTHO05D003038 7.9e-08 60.8 65 40.0
Nn8g39243 Nelumbo nucifera HOM05D005672 ORTHO05D003038 7.9e-08 60.8 71 45.1
Potri.003G056450 Populus trichocarpa HOM05D005672 ORTHO05D003038 1.3e-07 60.1 92 39.1
Ciclev10026944m.g Citrus clementina HOM05D005672 ORTHO05D003038 1.8e-07 59.7 103 35.9
BcaC05g25121 Brassica carinata HOM05D007482 ORTHO05D003038 2.3e-07 59.3 112 35.7
MELO3C023363.2 Cucumis melo HOM05D005672 ORTHO05D003038 3.0e-07 58.9 84 33.3
C08p47190 Brassica napus HOM05D007482 ORTHO05D003038 3.9e-07 58.5 117 35.0
Nn2g15314 Nelumbo nucifera HOM05D005672 ORTHO05D003038 3.9e-07 58.5 104 37.5
BcaB08g34257 Brassica carinata HOM05D007482 ORTHO05D003038 8.7e-07 57.4 96 35.4
PSO339G4924 Papaver somniferum HOM05D033620 ORTHO05D003038 8.7e-07 57.4 107 33.6
Prupe.3G073100 Prunus persica HOM05D005672 ORTHO05D003038 1.1e-06 57.0 110 34.5
BcaB08g34258 Brassica carinata HOM05D007482 ORTHO05D003038 1.5e-06 56.6 122 31.1
C08p47200 Brassica napus HOM05D007482 ORTHO05D003038 1.5e-06 56.6 119 31.1
A09p63700 Brassica napus HOM05D007482 ORTHO05D003038 1.9e-06 56.2 119 30.3
MELO3C030573.2 Cucumis melo HOM05D005672 ORTHO05D003038 1.9e-06 56.2 104 30.8
A09p35330 Brassica napus HOM05D007482 ORTHO05D003038 2.5e-06 55.8 118 31.4
BraA09t41718Z Brassica rapa HOM05D007482 ORTHO05D003038 3.3e-06 55.5 119 30.3
C05p30030 Brassica napus HOM05D007482 ORTHO05D003038 4.3e-06 55.1 96 34.4
BolC5t31740H Brassica oleracea HOM05D007482 ORTHO05D003038 4.3e-06 55.1 96 34.4
Ciclev10026837m.g Citrus clementina HOM05D005672 ORTHO05D003038 5.6e-06 54.7 80 40.0
Sed0013481 Sechium edule HOM05D005672 ORTHO05D003038 5.6e-06 54.7 107 31.8
Carub.0004s0495 Capsella rubella HOM05D007482 ORTHO05D003038 7.4e-06 54.3 123 30.1


User provided reference genes

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