Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 2.4e-125 452.2 236 100.0
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 1.2e-92 343.6 240 79.2
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 7.5e-42 174.9 257 46.3
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 1.7e-41 173.7 250 46.0
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 4.9e-41 172.2 249 45.8
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 5.6e-37 158.7 254 44.9
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 1.6e-36 157.1 263 44.9
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 1.6e-36 157.1 241 47.3
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 2.1e-36 156.8 251 45.0
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 2.1e-36 156.8 251 45.0
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 1.4e-35 154.1 261 45.2
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 3.0e-35 152.9 254 43.3
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 5.7e-34 148.7 253 47.4
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 7.8e-31 138.3 224 49.6
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 2.3e-30 136.7 251 39.4
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 5.0e-30 135.6 263 38.8
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 2.5e-29 133.3 263 38.4
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.1e-28 130.2 256 38.7
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 4.7e-28 129.0 252 38.1
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 8.0e-28 128.3 255 38.4
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.8e-27 127.1 259 36.3
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 6.8e-27 125.2 242 40.1
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 1.7e-25 120.6 263 39.5
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.1e-24 117.9 260 36.2
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 4.1e-24 115.9 282 33.7
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 5.4e-24 115.5 268 35.4
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 1.6e-23 114.0 243 41.2
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 2.0e-23 113.6 267 34.5
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 2.7e-23 113.2 265 34.3
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 4.6e-23 112.5 229 39.7
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 1.0e-22 111.3 181 44.2
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 1.3e-22 110.9 261 37.9
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 1.5e-21 107.5 232 39.2
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 1.9e-21 107.1 287 36.6
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 9.5e-21 104.8 266 34.6
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 2.1e-20 103.6 260 35.4
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 6.2e-20 102.1 258 37.2
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 1.4e-19 100.9 253 34.8
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.4e-19 100.9 231 34.6
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 1.8e-19 100.5 226 35.8
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 1.8e-19 100.5 249 34.1
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.8e-19 100.5 260 32.3
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 3.1e-19 99.8 232 37.5
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 6.8e-19 98.6 255 32.9
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.6e-18 96.7 267 33.7
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 7.5e-18 95.1 260 32.7
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 1.3e-17 94.4 243 36.6
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 1.7e-17 94.0 251 32.3
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.9e-17 93.2 259 34.0
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 3.7e-17 92.8 254 34.6
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 6.4e-17 92.0 217 34.6
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 1.1e-16 91.3 264 33.0
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 1.9e-16 90.5 250 33.2
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 3.2e-16 89.7 249 32.1
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 5.4e-16 89.0 250 31.6
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 5.4e-16 89.0 217 34.1
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 5.4e-16 89.0 244 36.9
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 7.1e-16 88.6 206 36.4
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 9.2e-16 88.2 240 31.2
RcHm_v2.0_Chr3g0486201 Rosa chinensis HOM05D006494 ORTHO05D007787 1.2e-15 87.8 238 35.3
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.6e-15 87.4 250 31.2
Oeu022605.1 Olea europaea HOM05D006494 ORTHO05D007787 2.1e-15 87.0 87 52.9
Actinidia03131 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.5e-15 86.3 111 48.6
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 6.0e-15 85.5 229 31.9
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 7.8e-15 85.1 233 33.0
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 3.0e-14 83.2 250 32.0
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 3.0e-14 83.2 241 29.0
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.9e-14 82.8 150 40.0
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 3.9e-14 82.8 253 31.2
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 8.6e-14 81.6 262 30.9
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 3.3e-13 79.7 253 30.4
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 4.3e-13 79.3 168 37.5
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 7.3e-13 78.6 235 29.8
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 7.3e-13 78.6 253 30.0
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 2.8e-12 76.6 246 35.4
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 4.7e-12 75.9 255 32.2
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 8.1e-12 75.1 236 29.7
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 1.8e-11 73.9 237 30.4
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 1.8e-11 73.9 266 30.5
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 1.8e-11 73.9 251 29.1
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.8e-11 73.9 252 31.3
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 5.2e-11 72.4 209 30.1
FAN05G4065 Fragaria x ananassa HOM05D006494 ORTHO05D007787 6.8e-11 72.0 251 29.1
Oeu032384.1 Olea europaea HOM05D006494 ORTHO05D007787 8.9e-11 71.6 69 60.9
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 8.9e-11 71.6 206 33.5
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 2.0e-10 70.5 247 32.4
FAN14G4923 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.0e-10 70.5 241 29.5
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 2.6e-10 70.1 268 29.5
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 2.6e-10 70.1 180 31.7
FAN02G3807 Fragaria x ananassa HOM05D006494 ORTHO05D007787 3.4e-10 69.7 251 30.3
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 4.4e-10 69.3 214 32.2
FvH4_6g24000 Fragaria vesca HOM05D006494 ORTHO05D007787 5.8e-10 68.9 241 29.5
FAN05G2781 Fragaria x ananassa HOM05D000001 ORTHO05D009295 1.3e-09 67.8 221 29.9
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 2.2e-09 67.0 225 28.4
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 3.7e-09 66.2 282 28.4
Sopen06g011990 Solanum pennellii HOM05D006494 ORTHO05D007787 3.2e-08 63.2 120 37.5
CSS0046040 Camellia sinensis var. sinensis HOM05D007739 ORTHO05D009838 9.2e-08 61.6 237 31.2
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 9.2e-08 61.6 154 36.4
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 2.1e-07 60.5 177 29.9
RcHm_v2.0_Chr3g0482721 Rosa chinensis HOM05D006494 ORTHO05D007787 2.7e-07 60.1 147 38.1
GSVIVG01037253001 Vitis vinifera HOM05D007739 ORTHO05D009838 2.7e-07 60.1 230 28.3
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 7.8e-07 58.5 193 32.6
Dinv36186 Davidia involucrata HOM05D002367 ORTHO05D002566 1.3e-06 57.8 207 28.5
Psat0s2528g0040 Pisum sativum HOM05D006494 ORTHO05D007787 1.7e-06 57.4 232 28.4
Cfa009840 Carpinus fangiana HOM05D007739 ORTHO05D009838 3.0e-06 56.6 201 27.4
COL.COLO4_10083 Corchorus olitorius HOM05D006494 ORTHO05D007787 3.0e-06 56.6 145 33.8


User provided reference genes

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