Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 4.1e-243 844.3 443 100.0
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 5.8e-80 302.4 450 47.3
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 1.9e-67 260.8 389 46.8
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 5.0e-63 246.1 451 44.6
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 1.4e-60 238.0 429 42.9
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 6.7e-60 235.7 435 41.1
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 6.3e-58 229.2 445 42.5
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 5.3e-57 226.1 406 42.1
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 7.7e-56 222.2 438 40.9
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 2.2e-55 220.7 455 42.2
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 1.4e-54 218.0 413 40.7
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 4.2e-54 216.5 408 40.0
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 6.1e-53 212.6 426 38.5
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 5.1e-52 209.5 455 39.1
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 2.6e-51 207.2 421 40.4
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 5.7e-51 206.1 396 41.4
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 2.2e-50 204.1 444 41.0
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 1.8e-49 201.1 457 39.6
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 7.7e-48 195.7 468 36.3
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 1.3e-47 194.9 413 39.2
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 1.1e-46 191.8 404 37.4
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 1.8e-44 184.5 422 39.8
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 2.6e-43 180.6 423 37.8
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 7.4e-43 179.1 434 38.0
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 2.2e-42 177.6 427 38.6
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 2.8e-42 177.2 438 36.5
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 8.2e-42 175.6 403 38.7
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 1.1e-38 165.2 458 35.2
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.9e-38 164.5 411 36.7
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 7.2e-38 162.5 425 37.6
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 9.4e-38 162.2 435 35.6
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 1.2e-37 161.8 445 33.3
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 6.1e-37 159.5 427 37.5
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 8.0e-37 159.1 425 36.2
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.0e-36 158.7 425 37.4
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 3.4e-35 153.7 389 37.0
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 4.4e-35 153.3 421 37.5
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 4.4e-35 153.3 347 38.0
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 4.4e-35 153.3 463 33.5
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 2.2e-34 151.0 433 34.9
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 2.4e-33 147.5 432 32.6
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 2.0e-32 144.4 399 37.6
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 2.7e-32 144.1 421 35.2
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 5.5e-30 136.3 419 34.4
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 1.2e-29 135.2 238 39.1
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 1.6e-29 134.8 424 32.8
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 2.0e-27 127.9 305 36.1
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 2.6e-27 127.5 257 37.7
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 6.3e-26 122.9 430 31.6
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 8.3e-26 122.5 285 36.5
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 1.4e-25 121.7 411 32.4
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 2.4e-25 120.9 431 33.2
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 7.0e-25 119.4 286 36.0
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 9.1e-25 119.0 278 35.3
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 1.2e-24 118.6 315 35.6
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 4.5e-24 116.7 402 31.8
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 5.0e-23 113.2 382 33.0
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 1.5e-22 111.7 419 29.8
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 3.0e-20 104.0 255 36.1
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 3.0e-20 104.0 389 29.3
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 1.2e-19 102.1 320 35.3
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 1.2e-19 102.1 320 35.3
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 4.4e-19 100.1 399 30.1
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 2.9e-18 97.4 295 35.9
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 2.9e-18 97.4 440 29.1
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 3.7e-18 97.1 418 30.1
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 4.9e-18 96.7 456 27.9
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 1.1e-17 95.5 380 33.2
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 2.0e-16 91.3 422 32.0
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 3.0e-15 87.4 302 34.1
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 3.9e-15 87.0 418 30.4
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 6.6e-15 86.3 121 43.0
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 8.6e-15 85.9 422 28.0
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 4.3e-14 83.6 391 30.4
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 8.0e-13 79.3 100 46.0
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 1.3e-10 72.0 447 24.8
Sed0012704 Sechium edule HOM05D007962 ORTHO05D009990 4.1e-09 67.0 410 31.2
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 3.5e-08 63.9 148 35.1
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 3.3e-06 57.4 303 29.4


User provided reference genes

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