Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006763.2 Olea europaea HOM05D007448 ORTHO05D009392 5.5e-59 230.7 113 100.0
Hma1.2p1_1003F.1_g246780 Hydrangea macrophylla HOM05D007448 ORTHO05D009392 5.4e-14 81.3 70 64.3
Hma1.2p1_1488F.1_g286625 Hydrangea macrophylla HOM05D007448 ORTHO05D009392 5.4e-14 81.3 70 64.3
Nn1g03921 Nelumbo nucifera HOM05D007448 ORTHO05D009392 2.0e-13 79.3 84 51.2
Oeu019361.1 Olea europaea HOM05D007448 ORTHO05D009392 2.0e-13 79.3 44 90.9
Nitab4.5_0000639g0040 Nicotiana tabacum HOM05D007448 ORTHO05D009392 6.0e-13 77.8 84 53.6
TAR626G0388 Trochodendron aralioides HOM05D007448 ORTHO05D009392 6.0e-13 77.8 78 55.1
Gohir.A13G143800 Gossypium hirsutum HOM05D007448 ORTHO05D009392 7.8e-13 77.4 84 51.2
CSS0027029 Camellia sinensis var. sinensis HOM05D007448 ORTHO05D009392 1.0e-12 77.0 77 55.8
SalBow8G2366 Salvia bowleyana HOM05D007448 ORTHO05D009392 1.0e-12 77.0 62 62.9
CAN.G1320.10 Capsicum annuum HOM05D007448 ORTHO05D009392 2.3e-12 75.9 81 53.1
Gohir.D13G148600 Gossypium hirsutum HOM05D007448 ORTHO05D009392 2.3e-12 75.9 84 51.2
Thecc.07G071800 Theobroma cacao HOM05D007448 ORTHO05D009392 2.3e-12 75.9 84 52.4
Gorai.013G166400 Gossypium raimondii HOM05D007448 ORTHO05D009392 5.0e-12 74.7 84 50.0
EL10Ac4g09050 Beta vulgaris HOM05D007448 ORTHO05D009392 8.6e-12 73.9 54 64.8
PGR083G2019 Punica granatum HOM05D007448 ORTHO05D009392 1.1e-11 73.6 47 74.5
Nitab4.5_0008360g0010 Nicotiana tabacum HOM05D007448 ORTHO05D009392 1.5e-11 73.2 84 51.2
Atru.chr4.846 Acer truncatum HOM05D007448 ORTHO05D009392 1.9e-11 72.8 57 59.6
GSVIVG01014426001 Vitis vinifera HOM05D007448 ORTHO05D009392 1.9e-11 72.8 77 51.9
Sc03g0009610 Simmondsia chinensis HOM05D007448 ORTHO05D009392 2.5e-11 72.4 87 52.9
Cpa.g.sc80.111 Carica papaya HOM05D007448 ORTHO05D009392 3.3e-11 72.0 51 66.7
AUR62029317 Chenopodium quinoa HOM05D007448 ORTHO05D009392 4.3e-11 71.6 60 56.7
Ciclev10010683m.g Citrus clementina HOM05D007448 ORTHO05D009392 5.6e-11 71.2 47 70.2
Sabra16G0269700 Salix brachista HOM05D007448 ORTHO05D009392 5.6e-11 71.2 54 64.8
AUR62015605 Chenopodium quinoa HOM05D007448 ORTHO05D009392 7.3e-11 70.9 61 55.7
Ciclev10010083m.g Citrus clementina HOM05D007448 ORTHO05D009392 7.3e-11 70.9 47 70.2
Peaxi162Scf00000g00504 Petunia axillaris HOM05D007448 ORTHO05D009392 7.3e-11 70.9 77 50.6
Sed0026843 Sechium edule HOM05D007448 ORTHO05D009392 7.3e-11 70.9 50 70.0
MSTRG.14378 Avicennia marina HOM05D007448 ORTHO05D009392 9.5e-11 70.5 48 68.8
unitig_899.g15312 Utricularia gibba HOM05D007448 ORTHO05D009392 9.5e-11 70.5 66 57.6
Cc06_g05250 Coffea canephora HOM05D007448 ORTHO05D009392 1.2e-10 70.1 98 45.9
Sopen12g006840 Solanum pennellii HOM05D007448 ORTHO05D009392 1.6e-10 69.7 75 53.3
MD03G1219500 Malus domestica HOM05D007448 ORTHO05D009392 2.1e-10 69.3 63 57.1
Ah.06g183620 Amaranthus hybridus HOM05D007448 ORTHO05D009392 2.8e-10 68.9 58 58.6
Cfa020508 Carpinus fangiana HOM05D007448 ORTHO05D009392 2.8e-10 68.9 55 63.6
CiPaw.11G176100 Carya illinoinensis HOM05D007448 ORTHO05D009392 2.8e-10 68.9 57 63.2
AUR62035371 Chenopodium quinoa HOM05D007448 ORTHO05D009392 2.8e-10 68.9 54 61.1
AUR62035373 Chenopodium quinoa HOM05D007448 ORTHO05D009392 2.8e-10 68.9 54 61.1
Eucgr.F01082 Eucalyptus grandis HOM05D007448 ORTHO05D009392 2.8e-10 68.9 47 68.1
HanXRQChr08g0234641 Helianthus annuus HOM05D007448 ORTHO05D009392 2.8e-10 68.9 50 66.0
Solyc12g013500.2 Solanum lycopersicum HOM05D007448 ORTHO05D009392 2.8e-10 68.9 75 52.0
PGSC0003DMG400008573 Solanum tuberosum HOM05D007448 ORTHO05D009392 2.8e-10 68.9 68 52.9
Duzib213G0053 Durio zibethinus HOM05D007448 ORTHO05D009392 3.6e-10 68.6 53 66.0
Prupe.4G189600 Prunus persica HOM05D007448 ORTHO05D009392 3.6e-10 68.6 63 58.7
QL08p018291 Quercus lobata HOM05D007448 ORTHO05D009392 3.6e-10 68.6 50 68.0
TWI39G0054 Tripterygium wilfordii HOM05D007448 ORTHO05D009392 4.7e-10 68.2 49 65.3
Manes.03G111700 Manihot esculenta HOM05D007448 ORTHO05D009392 6.2e-10 67.8 50 68.0
Potri.001G406200 Populus trichocarpa HOM05D007448 ORTHO05D009392 6.2e-10 67.8 47 68.1
RcHm_v2.0_Chr5g0035321 Rosa chinensis HOM05D007448 ORTHO05D009392 8.1e-10 67.4 50 66.0
ClCG11G018440 Citrullus lanatus HOM05D007448 ORTHO05D009392 1.1e-09 67.0 50 66.0
DCAR_021403 Daucus carota HOM05D007448 ORTHO05D009392 1.1e-09 67.0 61 57.4
Rhsim04G0017500 Rhododendron simsii HOM05D007448 ORTHO05D009392 1.8e-09 66.2 77 54.5
FAN11G2341 Fragaria x ananassa HOM05D007448 ORTHO05D009392 2.3e-09 65.9 63 57.1
Gohir.A11G075500 Gossypium hirsutum HOM05D007448 ORTHO05D009392 2.3e-09 65.9 66 57.6
Migut.M00875 Erythranthe guttata HOM05D007448 ORTHO05D009392 3.1e-09 65.5 47 70.2
FvH4_3g20900 Fragaria vesca HOM05D007448 ORTHO05D009392 3.1e-09 65.5 62 58.1
FAN25G3793 Fragaria x ananassa HOM05D007448 ORTHO05D009392 3.1e-09 65.5 47 68.1
FAN21G3287 Fragaria x ananassa HOM05D007448 ORTHO05D009392 4.0e-09 65.1 62 58.1
Lsat_1_v5_gn_5_6900 Lactuca sativa HOM05D007448 ORTHO05D009392 4.0e-09 65.1 57 56.1
Actinidia18748 Actinidia chinensis HOM05D007448 ORTHO05D009392 5.2e-09 64.7 60 60.0
CsaV3_3G044380 Cucumis sativus L. HOM05D007448 ORTHO05D009392 5.2e-09 64.7 50 62.0
Gorai.007G085800 Gossypium raimondii HOM05D007448 ORTHO05D009392 1.2e-08 63.5 48 64.6
CDE02G3786 Ceratophyllum demersum HOM05D007448 ORTHO05D009392 3.4e-08 62.0 69 46.4
CDE05G1526 Ceratophyllum demersum HOM05D007448 ORTHO05D009392 3.4e-08 62.0 88 40.9
Hund02207 Selenicereus undatus HOM05D007448 ORTHO05D009392 5.8e-08 61.2 50 62.0
Glyma.06G253900 Glycine max HOM05D007448 ORTHO05D009392 9.9e-08 60.5 46 60.9
Phvul.011G154800 Phaseolus vulgaris HOM05D007448 ORTHO05D009392 9.9e-08 60.5 46 63.0
MELO3C018199.2 Cucumis melo HOM05D003028 ORTHO05D003465 1.7e-07 59.7 44 65.9
Glyma.12G147500 Glycine max HOM05D007448 ORTHO05D009392 1.7e-07 59.7 46 60.9
arahy.Tifrunner.gnm1.ann1.UX5IA9 Arachis hypogaea HOM05D007448 ORTHO05D009392 3.7e-07 58.5 77 41.6
CANSAT11G1525 Cannabis sativa HOM05D007448 ORTHO05D009392 3.7e-07 58.5 42 66.7
ECA246G0067 Erigeron canadensis HOM05D007448 ORTHO05D009392 3.7e-07 58.5 61 49.2
vmacro09556 Vaccinium macrocarpon HOM05D007448 ORTHO05D009392 3.7e-07 58.5 48 64.6
arahy.Tifrunner.gnm1.ann1.GZ4R1Y Arachis hypogaea HOM05D007448 ORTHO05D009392 6.4e-07 57.8 77 40.3
BcaC06g35910 Brassica carinata HOM05D007448 ORTHO05D009392 6.4e-07 57.8 47 55.3
C07p09790 Brassica napus HOM05D004899 ORTHO05D006580 6.4e-07 57.8 47 55.3
BolC7t41418H Brassica oleracea HOM05D007448 ORTHO05D009392 6.4e-07 57.8 47 55.3
Thhalv10021866m.g Eutrema salsugineum HOM05D007448 ORTHO05D009392 1.1e-06 57.0 47 53.2
Sp3g23710 Schrenkiella parvula HOM05D007448 ORTHO05D009392 1.4e-06 56.6 47 53.2
BcaB06g26831 Brassica carinata HOM05D007448 ORTHO05D009392 1.9e-06 56.2 47 53.2
PSO421G0428 Papaver somniferum HOM05D007448 ORTHO05D009392 2.4e-06 55.8 58 50.0
A07p06520 Brassica napus HOM05D007448 ORTHO05D009392 3.2e-06 55.5 47 53.2
BraA07t28447Z Brassica rapa HOM05D007448 ORTHO05D009392 3.2e-06 55.5 47 53.2
THA.LOC104822630 Tarenaya hassleriana HOM05D007448 ORTHO05D009392 3.2e-06 55.5 57 50.9
Lj3g0013278 Lotus japonicus HOM05D007448 ORTHO05D009392 7.1e-06 54.3 58 48.3


User provided reference genes

Program Settings