Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.0e-205 719.9 395 100.0
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 6.3e-118 428.3 393 66.9
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 1.2e-113 414.1 399 64.4
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 7.4e-111 404.8 373 65.1
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 1.7e-110 403.7 409 63.8
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 1.6e-105 387.1 390 61.5
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 2.0e-103 380.2 388 60.6
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 4.5e-100 369.0 323 69.3
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 6.5e-99 365.2 371 59.6
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 2.1e-97 360.1 396 60.1
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 1.0e-96 357.8 396 58.6
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 6.3e-94 348.6 409 56.7
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 6.3e-94 348.6 415 55.9
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.1e-93 347.8 403 57.6
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 7.0e-93 345.1 404 56.9
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 9.1e-93 344.7 414 56.3
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 2.3e-91 340.1 413 55.4
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 3.8e-91 339.3 413 55.2
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 6.6e-91 338.6 406 55.4
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 6.6e-91 338.6 389 57.6
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 1.6e-89 334.0 497 49.9
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 3.6e-89 332.8 415 54.5
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 5.2e-88 328.9 396 57.3
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.2e-87 327.8 385 60.8
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 1.5e-87 327.4 303 61.7
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 2.0e-87 327.0 402 56.5
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.0e-87 327.0 396 57.1
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 9.8e-87 324.7 418 55.5
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 3.1e-85 319.7 401 55.9
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 7.0e-85 318.5 406 55.4
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 2.7e-84 316.6 411 51.6
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 8.6e-83 311.6 399 53.4
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 8.6e-83 311.6 403 55.1
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 1.1e-82 311.2 381 54.9
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 1.5e-82 310.8 387 56.1
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 4.7e-81 305.8 367 57.5
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.3e-80 303.5 364 59.3
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 1.2e-79 301.2 360 55.8
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 2.6e-79 300.1 413 52.3
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 3.4e-79 299.7 421 52.3
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 9.8e-79 298.1 398 54.0
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 2.4e-77 293.5 305 57.0
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 4.1e-77 292.7 382 55.5
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 4.6e-76 289.3 378 53.4
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 6.0e-76 288.9 448 48.7
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 7.8e-76 288.5 396 54.8
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 1.3e-75 287.7 412 51.0
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 3.9e-75 286.2 287 58.5
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 6.6e-75 285.4 300 56.7
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 7.3e-74 282.0 395 52.7
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 1.2e-73 281.2 373 54.2
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 1.8e-72 277.3 372 55.1
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 6.8e-72 275.4 420 50.2
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 8.9e-72 275.0 449 47.4
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 1.2e-71 274.6 416 48.6
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 1.5e-71 274.2 413 51.1
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 2.0e-71 273.9 388 51.3
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 2.6e-71 273.5 350 52.9
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 3.4e-71 273.1 389 51.2
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 4.4e-71 272.7 364 54.4
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 5.8e-71 272.3 340 54.7
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 9.8e-71 271.6 386 52.8
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 1.4e-69 267.7 415 50.6
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 1.4e-69 267.7 395 51.6
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 6.0e-68 262.3 384 49.5
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 1.7e-67 260.8 247 59.1
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 1.7e-67 260.8 209 67.9
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 2.3e-67 260.4 329 59.6
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 5.1e-67 259.2 331 57.7
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 6.6e-67 258.8 388 49.0
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 8.6e-67 258.5 357 51.3
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.9e-66 257.3 392 48.0
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.9e-66 257.3 394 47.7
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 7.3e-66 255.4 353 51.8
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 1.2e-65 254.6 353 51.8
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 2.8e-65 253.4 351 50.7
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 6.2e-65 252.3 267 52.4
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 6.8e-64 248.8 380 49.5
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 7.5e-63 245.4 280 54.6
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 1.7e-62 244.2 366 49.7
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 3.7e-62 243.0 223 57.4
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 6.4e-62 242.3 372 55.1
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 1.9e-61 240.7 353 49.6
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 2.4e-61 240.4 372 48.7
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 7.1e-61 238.8 268 55.6
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 4.6e-60 236.1 351 49.9
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 4.6e-60 236.1 297 49.2
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 1.0e-59 235.0 413 44.3
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 5.1e-59 232.6 197 64.0
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 6.6e-59 232.3 184 66.3
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.5e-58 231.1 335 52.5
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 7.3e-58 228.8 344 48.0
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 1.1e-56 224.9 278 52.2
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 5.2e-56 222.6 279 50.2
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.5e-55 221.1 309 43.7
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 5.8e-55 219.2 195 60.0
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 1.7e-51 207.6 189 61.9
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 2.5e-50 203.8 282 45.0
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 8.1e-49 198.7 279 42.7
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 6.9e-48 195.7 176 65.3
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 3.4e-47 193.4 365 44.9
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 3.4e-47 193.4 208 51.4
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 1.4e-45 188.0 275 48.4
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 2.4e-45 187.2 167 61.1
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 2.5e-42 177.2 240 41.7
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.1e-40 171.8 344 43.9
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 3.1e-40 170.2 218 45.9
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 7.6e-39 165.6 262 40.8
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 1.6e-36 157.9 212 41.0
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 1.0e-35 155.2 218 41.7
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 1.8e-35 154.5 199 61.8
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 1.1e-32 145.2 239 51.9
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 1.3e-30 138.3 204 41.2
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 2.5e-26 124.0 178 42.1
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.5e-15 88.2 58 75.9
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 5.9e-15 86.3 143 45.5


User provided reference genes

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