Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006657.1 Olea europaea HOM05D006983 ORTHO05D008942 1.0e-43 179.9 101 100.0
Migut.F00708 Erythranthe guttata HOM05D006983 ORTHO05D008942 2.5e-18 95.5 69 75.4
Nitab4.5_0012179g0010 Nicotiana tabacum HOM05D006983 ORTHO05D007189 7.2e-18 94.0 69 75.4
Dinv20949 Davidia involucrata HOM05D006983 ORTHO05D008942 1.0e-16 90.1 90 61.1
Dinv20994 Davidia involucrata HOM05D006983 ORTHO05D008942 1.0e-16 90.1 90 61.1
Cc02_g06970 Coffea canephora HOM05D006983 ORTHO05D008942 1.8e-16 89.4 90 63.3
Nitab4.5_0000278g0220 Nicotiana tabacum HOM05D006983 ORTHO05D007189 2.3e-16 89.0 69 72.5
Potri.010G193500 Populus trichocarpa HOM05D006983 ORTHO05D008942 3.9e-16 88.2 69 72.5
Gohir.D10G242900 Gossypium hirsutum HOM05D006983 ORTHO05D008942 6.7e-16 87.4 71 69.0
SalBow5G0486 Salvia bowleyana HOM05D006983 ORTHO05D008942 6.7e-16 87.4 69 71.0
Gorai.011G279300 Gossypium raimondii HOM05D006983 ORTHO05D008942 8.8e-16 87.0 71 69.0
Cpa.g.sc19.223 Carica papaya HOM05D006983 ORTHO05D008942 1.1e-15 86.7 69 68.1
Thecc.10G027200 Theobroma cacao HOM05D006983 ORTHO05D008942 1.1e-15 86.7 93 59.1
Ciclev10033883m.g Citrus clementina HOM05D006983 ORTHO05D008942 2.6e-15 85.5 69 66.7
Haze_17176 Corylus avellana HOM05D006983 ORTHO05D008942 3.3e-15 85.1 71 70.4
Dinv20946 Davidia involucrata HOM05D006983 ORTHO05D008942 4.4e-15 84.7 89 59.6
Dinv20997 Davidia involucrata HOM05D006983 ORTHO05D008942 4.4e-15 84.7 89 59.6
Duzib114G0863 Durio zibethinus HOM05D006983 ORTHO05D008942 7.4e-15 84.0 71 66.2
Gohir.A10G228900 Gossypium hirsutum HOM05D006983 ORTHO05D008942 1.7e-14 82.8 71 66.2
Manes.10G018300 Manihot esculenta HOM05D006983 ORTHO05D008942 3.7e-14 81.6 69 66.7
GSVIVG01016377001 Vitis vinifera HOM05D006983 ORTHO05D008942 3.7e-14 81.6 70 67.1
TAR623G0945 Trochodendron aralioides HOM05D006983 ORTHO05D008942 4.8e-14 81.3 69 66.7
Atru.chr12.252 Acer truncatum HOM05D006983 ORTHO05D008942 8.2e-14 80.5 69 66.7
Sc10g0002160 Simmondsia chinensis HOM05D006983 ORTHO05D008942 1.4e-13 79.7 115 51.3
Gohir.A05G346200 Gossypium hirsutum HOM05D006983 ORTHO05D008942 1.8e-13 79.3 69 63.8
CiPaw.01G295300 Carya illinoinensis HOM05D006983 ORTHO05D008942 3.1e-13 78.6 69 68.1
Duzib106G0752 Durio zibethinus HOM05D006983 ORTHO05D008942 3.1e-13 78.6 72 66.7
vmacro07000 Vaccinium macrocarpon HOM05D006983 ORTHO05D008942 3.1e-13 78.6 95 55.8
TWI73G0069 Tripterygium wilfordii HOM05D006983 ORTHO05D008942 4.1e-13 78.2 71 63.4
COL.COLO4_25671 Corchorus olitorius HOM05D006983 ORTHO05D008942 7.0e-13 77.4 71 64.8
ECA238G4046 Erigeron canadensis HOM05D006983 ORTHO05D008942 9.1e-13 77.0 69 66.7
FvH4_7g23940 Fragaria vesca HOM05D006983 ORTHO05D008942 9.1e-13 77.0 69 65.2
FAN01G0283 Fragaria x ananassa HOM05D006983 ORTHO05D008942 9.1e-13 77.0 69 65.2
FAN06G2291 Fragaria x ananassa HOM05D006983 ORTHO05D008942 9.1e-13 77.0 69 65.2
RcHm_v2.0_Chr1g0369271 Rosa chinensis HOM05D006983 ORTHO05D008942 9.1e-13 77.0 69 66.7
FAN10G1282 Fragaria x ananassa HOM05D006983 ORTHO05D008942 2.0e-12 75.9 69 65.2
Lj1A949T61 Lonicera japonica HOM05D006983 ORTHO05D008942 2.0e-12 75.9 70 65.7
Prupe.2G245400 Prunus persica HOM05D006983 ORTHO05D008942 2.0e-12 75.9 69 62.3
HanXRQChr14g0458841 Helianthus annuus HOM05D006983 ORTHO05D008942 2.6e-12 75.5 82 58.5
FAN03G3227 Fragaria x ananassa HOM05D006983 ORTHO05D008942 3.5e-12 75.1 69 65.2
Hma1.2p1_0710F.1_g207380 Hydrangea macrophylla HOM05D006983 ORTHO05D008942 3.5e-12 75.1 69 62.3
Sed0026510 Sechium edule HOM05D006983 ORTHO05D008942 4.5e-12 74.7 68 58.8
ECA233G0306 Erigeron canadensis HOM05D006983 ORTHO05D008942 5.9e-12 74.3 91 57.1
MD07G1213100 Malus domestica HOM05D006983 ORTHO05D008942 5.9e-12 74.3 69 65.2
MD01G1146200 Malus domestica HOM05D006983 ORTHO05D008942 7.7e-12 73.9 69 66.7
Thhalv10017044m.g Eutrema salsugineum HOM05D006983 ORTHO05D008942 1.3e-11 73.2 69 60.9
Gohir.D04G066400 Gossypium hirsutum HOM05D006983 ORTHO05D008942 1.3e-11 73.2 69 59.4
Gorai.012G075200 Gossypium raimondii HOM05D006983 ORTHO05D008942 1.7e-11 72.8 69 58.0
PGR142G1076 Punica granatum HOM05D006983 ORTHO05D008942 2.2e-11 72.4 70 62.9
Carub.0004s2205 Capsella rubella HOM05D006983 ORTHO05D008942 3.8e-11 71.6 69 62.3
Actinidia29673 Actinidia chinensis HOM05D006983 ORTHO05D008942 5.0e-11 71.2 62 64.5
MBI05_g03441_MAGBIO Magnolia biondii HOM05D006983 ORTHO05D008942 5.0e-11 71.2 90 51.1
AL4G37500 Arabidopsis lyrata HOM05D006983 ORTHO05D008942 8.5e-11 70.5 69 59.4
QL08p062549 Quercus lobata HOM05D006983 ORTHO05D008942 8.5e-11 70.5 72 63.9
AT2G39920 Arabidopsis thaliana HOM05D006983 ORTHO05D008942 1.5e-10 69.7 69 62.3
arahy.Tifrunner.gnm1.ann1.A3NAV6 Arachis hypogaea HOM05D006983 ORTHO05D008942 1.5e-10 69.7 69 58.0
Sp4g22230 Schrenkiella parvula HOM05D006983 ORTHO05D008942 1.5e-10 69.7 69 56.5
Aa31LG5G19700 Aethionema arabicum HOM05D006983 ORTHO05D008942 1.9e-10 69.3 69 58.0
BcaB02g09071 Brassica carinata HOM05D006983 ORTHO05D008942 1.9e-10 69.3 69 59.4
A05p06500 Brassica napus HOM05D006983 ORTHO05D008942 1.9e-10 69.3 69 59.4
C04p07590 Brassica napus HOM05D006983 ORTHO05D008942 1.9e-10 69.3 69 59.4
BraA05t19618Z Brassica rapa HOM05D006983 ORTHO05D008942 1.9e-10 69.3 69 59.4
Glyma.11G226700 Glycine max HOM05D006983 ORTHO05D008942 3.2e-10 68.6 90 50.0
THA.LOC104810069 Tarenaya hassleriana HOM05D006983 ORTHO05D008942 3.2e-10 68.6 70 60.0
Eucgr.G03025 Eucalyptus grandis HOM05D006983 ORTHO05D008942 4.2e-10 68.2 69 58.0
Glyma.18G030500 Glycine max HOM05D006983 ORTHO05D008942 4.2e-10 68.2 69 56.5
MELO3C025147.2 Cucumis melo HOM05D006983 ORTHO05D008942 5.5e-10 67.8 71 54.9
CsaV3_5G008850 Cucumis sativus L. HOM05D006983 ORTHO05D008942 5.5e-10 67.8 71 54.9
CARHR134840 Cardamine hirsuta HOM05D006983 ORTHO05D008942 7.2e-10 67.4 69 56.5
HanXRQChr12g0369331 Helianthus annuus HOM05D006983 ORTHO05D008942 7.2e-10 67.4 69 60.9
BcaC02g12125 Brassica carinata HOM05D006983 ORTHO05D008942 9.4e-10 67.0 69 58.0
BolC4t22375H Brassica oleracea HOM05D006983 ORTHO05D008942 9.4e-10 67.0 69 58.0
CSS0012253 Camellia sinensis var. sinensis HOM05D006983 ORTHO05D008942 2.7e-09 65.5 88 50.0
DCAR_024839 Daucus carota HOM05D006983 ORTHO05D008942 2.7e-09 65.5 61 59.0
Lsat_1_v5_gn_2_120641 Lactuca sativa HOM05D006983 ORTHO05D008942 2.7e-09 65.5 101 47.5
Rhsim03G0139600 Rhododendron simsii HOM05D006983 ORTHO05D008942 2.7e-09 65.5 69 58.0
TPR.G29801 Trifolium pratense HOM05D006983 ORTHO05D008942 3.6e-09 65.1 69 53.6
Sabra10G0149000 Salix brachista HOM05D006983 ORTHO05D008942 4.7e-09 64.7 105 46.7
Ca_05926_v3 Cicer arietinum L. HOM05D006983 ORTHO05D008942 6.1e-09 64.3 69 53.6
Lalb_Chr10g0104981 Lupinus albus HOM05D006983 ORTHO05D008942 1.4e-08 63.2 69 58.0
Psat2g036160 Pisum sativum HOM05D006983 ORTHO05D008942 1.4e-08 63.2 69 52.2
HPP92_015339 Vanilla planifolia HOM05D006983 ORTHO05D008942 1.4e-08 63.2 69 50.7
LjContig00357g0002291 Lotus japonicus HOM05D006983 ORTHO05D008942 1.8e-08 62.8 69 52.2
Psat5g127360 Pisum sativum HOM05D006983 ORTHO05D008942 2.3e-08 62.4 90 45.6
Phvul.001G240100 Phaseolus vulgaris HOM05D006983 ORTHO05D008942 3.0e-08 62.0 90 46.7
Medtr3g070090 Medicago truncatula HOM05D006983 ORTHO05D008942 6.7e-08 60.8 90 45.6
VMungo1383G1034 Vigna mungo HOM05D006983 ORTHO05D008942 6.7e-08 60.8 90 44.4
arahy.Tifrunner.gnm1.ann1.6C4W0P Arachis hypogaea HOM05D006983 ORTHO05D008942 1.1e-07 60.1 90 44.4
Glyma.02G253900 Glycine max HOM05D006983 ORTHO05D008942 1.5e-07 59.7 69 49.3
Medtr7g092870 Medicago truncatula HOM05D006983 ORTHO05D008942 2.0e-07 59.3 69 52.2
arahy.Tifrunner.gnm1.ann1.IY3N90 Arachis hypogaea HOM05D006983 ORTHO05D008942 2.6e-07 58.9 95 42.1
PSO339G3533 Papaver somniferum HOM05D006983 ORTHO05D008942 2.6e-07 58.9 69 52.2
DCAR_011784 Daucus carota HOM05D003187 ORTHO05D003630 3.3e-07 58.5 64 56.2
Medtr5g081740 Medicago truncatula HOM05D006983 ORTHO05D008942 7.5e-07 57.4 69 50.7
Glyma.14G062600 Glycine max HOM05D006983 ORTHO05D008942 9.7e-07 57.0 69 49.3
PSO384G2074 Papaver somniferum HOM05D006983 ORTHO05D008942 9.7e-07 57.0 69 52.2
Phvul.008G227000 Phaseolus vulgaris HOM05D006983 ORTHO05D008942 9.7e-07 57.0 70 51.4
arahy.Tifrunner.gnm1.ann1.8MP8X0 Arachis hypogaea HOM05D006983 ORTHO05D038939 1.7e-06 56.2 63 50.8
Ca_17141_v3 Cicer arietinum L. HOM05D006983 ORTHO05D008942 2.8e-06 55.5 62 53.2
VMungo0647G1533 Vigna mungo HOM05D006983 ORTHO05D008942 3.7e-06 55.1 70 50.0
ATR0618G335 Amborella trichopoda HOM05D006983 ORTHO05D008942 4.8e-06 54.7 61 54.1
Nn2g15918 Nelumbo nucifera HOM05D006983 ORTHO05D008942 6.3e-06 54.3 70 52.9


User provided reference genes

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