Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006618.1 Olea europaea HOM05D004101 ORTHO05D005221 4.5e-194 681.0 332 100.0
Oeu028926.1 Olea europaea HOM05D004101 ORTHO05D005221 3.2e-139 498.8 295 80.7
Dinv05108 Davidia involucrata HOM05D004101 ORTHO05D005221 1.4e-134 483.4 289 79.6
Dinv36168 Davidia involucrata HOM05D004101 ORTHO05D005221 1.5e-133 479.9 289 79.2
Migut.N00698 Erythranthe guttata HOM05D004101 ORTHO05D005221 3.8e-132 475.3 297 77.8
CiPaw.03G015400 Carya illinoinensis HOM05D004101 ORTHO05D005221 1.4e-131 473.4 289 78.5
CSS0023016 Camellia sinensis var. sinensis HOM05D004101 ORTHO05D005221 6.0e-130 468.0 289 77.2
MSTRG.12725 Avicennia marina HOM05D004101 ORTHO05D005221 1.0e-129 467.2 295 76.3
Gohir.D02G102700 Gossypium hirsutum HOM05D004101 ORTHO05D005221 2.3e-129 466.1 292 76.7
QL09p002038 Quercus lobata HOM05D004101 ORTHO05D005221 2.3e-129 466.1 278 80.6
Gohir.D05G255640 Gossypium hirsutum HOM05D004101 ORTHO05D005221 3.0e-129 465.7 292 76.4
Gorai.009G267200 Gossypium raimondii HOM05D004101 ORTHO05D005221 3.0e-129 465.7 292 76.4
Cfa008084 Carpinus fangiana HOM05D004101 ORTHO05D005221 3.9e-129 465.3 285 78.6
Gohir.A02G087700 Gossypium hirsutum HOM05D004101 ORTHO05D005221 1.1e-128 463.8 292 76.4
Actinidia29382 Actinidia chinensis HOM05D004101 ORTHO05D005221 1.9e-128 463.0 283 78.1
Gohir.A05G253700 Gossypium hirsutum HOM05D004101 ORTHO05D005221 1.9e-128 463.0 292 76.0
Hund26650 Selenicereus undatus HOM05D004101 ORTHO05D005221 4.3e-128 461.8 288 76.7
GSVIVG01036377001 Vitis vinifera HOM05D004101 ORTHO05D005221 4.3e-128 461.8 288 76.4
Thecc.08G177600 Theobroma cacao HOM05D004101 ORTHO05D005221 5.6e-128 461.5 286 76.9
Gorai.005G116600 Gossypium raimondii HOM05D004101 ORTHO05D005221 1.3e-127 460.3 292 76.0
Sopen01g003840 Solanum pennellii HOM05D004101 ORTHO05D005221 1.6e-127 459.9 291 74.2
Solyc01g008320.3 Solanum lycopersicum HOM05D004101 ORTHO05D005221 6.2e-127 458.0 291 73.9
Duzib177G1024 Durio zibethinus HOM05D004101 ORTHO05D005221 1.4e-126 456.8 292 75.3
Haze_13953 Corylus avellana HOM05D004101 ORTHO05D005221 1.8e-126 456.4 299 74.2
Potri.013G099700 Populus trichocarpa HOM05D004101 ORTHO05D005221 4.0e-126 455.3 288 76.7
Sc26g0002190 Simmondsia chinensis HOM05D004101 ORTHO05D005221 4.0e-126 455.3 284 76.4
TWI12G0255 Tripterygium wilfordii HOM05D004101 ORTHO05D005221 4.0e-126 455.3 294 74.5
AL1G49570 Arabidopsis lyrata HOM05D004101 ORTHO05D005221 5.3e-126 454.9 287 75.6
PGR042G3616 Punica granatum HOM05D004101 ORTHO05D005221 5.3e-126 454.9 292 74.0
EL10Ac1g01668 Beta vulgaris HOM05D004101 ORTHO05D005221 9.0e-126 454.1 290 75.2
Sabra13G0085500 Salix brachista HOM05D004101 ORTHO05D005221 1.2e-125 453.8 285 77.2
SGA_v2.0_scaffold158G37476 Striga asiatica HOM05D004101 ORTHO05D005221 1.2e-125 453.8 291 75.9
vmacro14428 Vaccinium macrocarpon HOM05D004101 ORTHO05D005221 1.2e-125 453.8 283 77.4
Potri.019G072300 Populus trichocarpa HOM05D004101 ORTHO05D005221 2.0e-125 453.0 282 77.0
Nitab4.5_0000069g0130 Nicotiana tabacum HOM05D004101 ORTHO05D005221 2.6e-125 452.6 310 71.3
SalBow2G0849 Salvia bowleyana HOM05D004101 ORTHO05D005221 2.6e-125 452.6 286 76.2
vmacro17837 Vaccinium macrocarpon HOM05D004101 ORTHO05D005221 2.6e-125 452.6 307 73.6
Nn5g27278 Nelumbo nucifera HOM05D004101 ORTHO05D005221 3.4e-125 452.2 283 75.6
Atru.chr13.2487 Acer truncatum HOM05D004101 ORTHO05D005221 4.5e-125 451.8 285 76.1
BcaB07g32808 Brassica carinata HOM05D004101 ORTHO05D005221 7.6e-125 451.1 286 74.8
CAN.G282.41 Capsicum annuum HOM05D004101 ORTHO05D005221 7.6e-125 451.1 291 73.5
TWI18G0503 Tripterygium wilfordii HOM05D004101 ORTHO05D005221 7.6e-125 451.1 294 73.5
VMungo1127G2207 Vigna mungo HOM05D004101 ORTHO05D005221 7.6e-125 451.1 284 77.5
BraA09t39007Z Brassica rapa HOM05D004101 ORTHO05D005221 1.3e-124 450.3 286 74.5
ClCG11G008940 Citrullus lanatus HOM05D004101 ORTHO05D005221 1.3e-124 450.3 296 73.6
Ciclev10018750m.g Citrus clementina HOM05D004101 ORTHO05D005221 1.3e-124 450.3 281 77.6
HanXRQChr03g0062111 Helianthus annuus HOM05D004101 ORTHO05D005221 1.3e-124 450.3 291 73.5
C05p30730 Brassica napus HOM05D004101 ORTHO05D005221 1.7e-124 449.9 286 74.8
TAR625G0099 Trochodendron aralioides HOM05D004101 ORTHO05D005221 1.7e-124 449.9 283 76.7
CSS0032109 Camellia sinensis var. sinensis HOM05D004101 ORTHO05D005221 4.9e-124 448.4 285 75.4
arahy.Tifrunner.gnm1.ann1.BP0NKM Arachis hypogaea HOM05D004101 ORTHO05D005221 6.4e-124 448.0 285 76.1
SGA_v2.0_scaffold120G33012 Striga asiatica HOM05D004101 ORTHO05D005221 6.4e-124 448.0 322 68.9
Glyma.09G234500 Glycine max HOM05D004101 ORTHO05D005221 8.4e-124 447.6 284 77.1
RcHm_v2.0_Chr6g0306901 Rosa chinensis HOM05D004101 ORTHO05D005221 1.4e-123 446.8 292 75.3
CARHR287040 Cardamine hirsuta HOM05D004101 ORTHO05D005221 1.9e-123 446.4 286 74.5
AUR62022357 Chenopodium quinoa HOM05D004101 ORTHO05D005221 1.9e-123 446.4 304 72.0
Manes.18G117901 Manihot esculenta HOM05D004101 ORTHO05D005221 1.9e-123 446.4 288 74.7
Lalb_Chr16g0391261 Lupinus albus HOM05D004101 ORTHO05D005221 2.4e-123 446.0 285 77.2
CsaV3_2G033160 Cucumis sativus L. HOM05D004101 ORTHO05D005221 3.2e-123 445.7 296 73.0
Migut.D00784 Erythranthe guttata HOM05D004101 ORTHO05D005221 3.2e-123 445.7 295 74.6
TAR383G0434 Trochodendron aralioides HOM05D004101 ORTHO05D005221 3.2e-123 445.7 282 76.2
AUR62034351 Chenopodium quinoa HOM05D004101 ORTHO05D005221 4.2e-123 445.3 304 71.4
THA.LOC104812717 Tarenaya hassleriana HOM05D004101 ORTHO05D005221 4.2e-123 445.3 289 74.7
Phvul.011G002700 Phaseolus vulgaris HOM05D004101 ORTHO05D005221 5.5e-123 444.9 285 76.5
AT1G31480 Arabidopsis thaliana HOM05D004101 ORTHO05D005221 7.1e-123 444.5 287 74.2
BcaC05g27176 Brassica carinata HOM05D004101 ORTHO05D005221 7.1e-123 444.5 298 71.5
BolC5t31805H Brassica oleracea HOM05D004101 ORTHO05D005221 9.3e-123 444.1 286 74.1
Carub.0001s2990 Capsella rubella HOM05D004101 ORTHO05D005221 1.6e-122 443.4 287 72.8
FAN20G0554 Fragaria x ananassa HOM05D004101 ORTHO05D005221 2.1e-122 443.0 286 75.9
Atru.chr13.2489 Acer truncatum HOM05D004101 ORTHO05D005221 2.7e-122 442.6 298 72.8
Sp1g27280 Schrenkiella parvula HOM05D004101 ORTHO05D005221 2.7e-122 442.6 286 74.1
Sed0018643 Sechium edule HOM05D004101 ORTHO05D005221 2.7e-122 442.6 292 72.9
Lsat_1_v5_gn_7_42860 Lactuca sativa HOM05D004101 ORTHO05D005221 1.0e-121 440.7 292 72.6
Aqoxy6G00101 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 1.3e-121 440.3 285 75.8
Aqoxy6G01398 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 1.3e-121 440.3 285 75.8
DCAR_019079 Daucus carota HOM05D004101 ORTHO05D005221 1.8e-121 439.9 282 74.8
Aqoxy2G02197 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 3.0e-121 439.1 285 75.4
Manes.02G221381 Manihot esculenta HOM05D004101 ORTHO05D005221 5.1e-121 438.3 282 75.2
Cc10_g08720 Coffea canephora HOM05D004101 ORTHO05D005221 1.1e-120 437.2 287 75.3
Thhalv10006721m.g Eutrema salsugineum HOM05D004101 ORTHO05D005221 1.9e-120 436.4 287 73.2
BraA08t33053Z Brassica rapa HOM05D004101 ORTHO05D005221 2.5e-120 436.0 286 73.1
FAN15G3699 Fragaria x ananassa HOM05D004101 ORTHO05D005221 4.3e-120 435.3 285 74.7
Aa31LG2G14460 Aethionema arabicum HOM05D004101 ORTHO05D005221 5.6e-120 434.9 288 73.3
A08p10530 Brassica napus HOM05D004101 ORTHO05D005221 9.6e-120 434.1 287 73.5
Lj3g0009901 Lotus japonicus HOM05D004101 ORTHO05D005221 1.6e-119 433.3 279 75.3
Prupe.1G442600 Prunus persica HOM05D004101 ORTHO05D005221 1.6e-119 433.3 285 73.7
Peaxi162Scf00021g02415 Petunia axillaris HOM05D004101 ORTHO05D005221 2.8e-119 432.6 270 76.3
CANSAT21G1017 Cannabis sativa HOM05D004101 ORTHO05D005221 1.4e-118 430.3 295 70.5
Ca_19680_v3 Cicer arietinum L. HOM05D004101 ORTHO05D005221 1.4e-118 430.3 278 76.6
unitig_8.g3682 Utricularia gibba HOM05D004101 ORTHO05D005221 1.8e-118 429.9 270 75.9
BcaC07g37755 Brassica carinata HOM05D004101 ORTHO05D005221 2.4e-118 429.5 283 72.4
BolC8t48140H Brassica oleracea HOM05D004101 ORTHO05D005221 2.4e-118 429.5 283 72.4
Medtr4g033490 Medicago truncatula HOM05D004101 ORTHO05D005221 2.4e-118 429.5 278 75.9
Psat7g146680 Pisum sativum HOM05D004101 ORTHO05D005221 2.4e-118 429.5 278 74.8
CANSAT78G1092 Cannabis sativa HOM05D004101 ORTHO05D005221 5.3e-118 428.3 283 74.2
FvH4_2g35070 Fragaria vesca HOM05D004101 ORTHO05D005221 2.6e-117 426.0 285 73.0
ECA240G3381 Erigeron canadensis HOM05D004101 ORTHO05D005221 5.8e-117 424.9 276 71.7
FAN27G2707 Fragaria x ananassa HOM05D004101 ORTHO05D005221 7.6e-117 424.5 285 72.6
Aa31LG9G15840 Aethionema arabicum HOM05D004101 ORTHO05D005221 1.0e-116 424.1 279 73.1
ATR1089G044 Amborella trichopoda HOM05D004101 ORTHO05D005221 2.9e-116 422.5 284 71.5
Sabra19G0083800 Salix brachista HOM05D004101 ORTHO05D005221 3.8e-116 422.2 359 60.7
Lsat_1_v5_gn_5_98501 Lactuca sativa HOM05D004101 ORTHO05D007752 6.5e-116 421.4 279 72.0
MD15G1088500 Malus domestica HOM05D004101 ORTHO05D005221 8.4e-116 421.0 285 71.6
MD08G1108000 Malus domestica HOM05D004101 ORTHO05D005221 4.2e-115 418.7 292 69.5
Lj2A387T50 Lonicera japonica HOM05D004101 ORTHO05D005221 1.2e-114 417.2 315 67.6
PSO017G5679 Papaver somniferum HOM05D004101 ORTHO05D005221 1.0e-113 414.1 286 69.9
PSO170G4509 Papaver somniferum HOM05D004101 ORTHO05D005221 3.0e-113 412.5 286 69.9
PSO017G3151 Papaver somniferum HOM05D004101 ORTHO05D005221 2.5e-112 409.5 279 71.0
ECA234G0584 Erigeron canadensis HOM05D004101 ORTHO05D005221 4.3e-112 408.7 282 69.9
arahy.Tifrunner.gnm1.ann1.FM3HJM Arachis hypogaea HOM05D004101 ORTHO05D005221 5.7e-112 408.3 374 57.8
HPP92_008596 Vanilla planifolia HOM05D004101 ORTHO05D005221 2.4e-110 402.9 314 64.6
HPP92_008553 Vanilla planifolia HOM05D004101 ORTHO05D005221 5.3e-110 401.7 293 67.6
PSO170G4791 Papaver somniferum HOM05D004101 ORTHO05D005221 6.9e-110 401.4 290 68.6
Os08g0110700 Oryza sativa ssp. japonica HOM05D004101 ORTHO05D005221 6.1e-106 388.3 279 67.7
Zm00001eb174090 Zea mays HOM05D004101 ORTHO05D005221 2.3e-105 386.3 280 67.9
Lj9A698G58 Lonicera japonica HOM05D004101 ORTHO05D005221 1.9e-104 383.3 239 78.2
Zm00001eb260480 Zea mays HOM05D004101 ORTHO05D005221 2.5e-104 382.9 284 66.9
Eucgr.F02954 Eucalyptus grandis HOM05D004101 ORTHO05D005221 5.7e-104 381.7 290 66.2
Ah.07g205660 Amaranthus hybridus HOM05D004101 ORTHO05D005221 8.5e-100 367.9 228 74.6
COL.COLO4_06914 Corchorus olitorius HOM05D004101 ORTHO05D005221 6.5e-92 341.7 205 78.5
SMO200G0043 Selaginella moellendorffii HOM05D004101 ORTHO05D005221 2.3e-89 333.2 250 63.2
Cpa.g.sc24.85 Carica papaya HOM05D004101 ORTHO05D005221 3.9e-89 332.4 220 73.2
MELO3C008088.2 Cucumis melo HOM05D004101 ORTHO05D005221 1.3e-87 327.4 208 74.5
Pp3c3_10170 Physcomitrium patens HOM05D004101 ORTHO05D005221 1.4e-86 323.9 301 54.5
AagrBONN_evm.TU.Sc2ySwM_228.4088 Anthoceros agrestis HOM05D004101 ORTHO05D005221 6.5e-84 315.1 268 58.6
CDE02G0702 Ceratophyllum demersum HOM05D004101 ORTHO05D005221 6.5e-84 315.1 242 64.9
Mapoly0151s0040 Marchantia polymorpha HOM05D004101 ORTHO05D005221 1.9e-83 313.5 267 57.3
Atru.chr13.2501 Acer truncatum HOM05D004101 ORTHO05D005221 1.2e-72 277.7 173 76.3
CBR_g19663 Chara braunii HOM05D004101 ORTHO05D005221 2.0e-69 266.9 243 55.1
A09p34710 Brassica napus HOM05D004101 ORTHO05D005221 5.0e-68 262.3 150 80.0
BcaB04g18154 Brassica carinata HOM05D004101 ORTHO05D005221 2.0e-53 213.8 160 68.1
A09p34730 Brassica napus HOM05D004101 ORTHO05D005221 3.5e-45 186.4 135 66.7
BcaB04g18153 Brassica carinata HOM05D004101 ORTHO05D005221 1.7e-44 184.1 112 75.9
Nitab4.5_0009427g0010 Nicotiana tabacum HOM05D004101 ORTHO05D005221 1.6e-42 177.6 136 63.2
SEGI_28351 Sequoiadendron giganteum HOM05D004101 ORTHO05D005221 2.3e-28 130.6 111 59.5
SEGI_38945 Sequoiadendron giganteum HOM05D004101 ORTHO05D005221 1.2e-26 124.8 79 70.9
BolC1t03898H Brassica oleracea HOM05D010251 ORTHO05D005221 1.4e-17 94.7 170 35.9
Medtr5g080490 Medicago truncatula HOM05D004101 ORTHO05D005221 1.8e-12 77.8 61 63.9
Lsat_1_v5_gn_5_153621 Lactuca sativa HOM05D004101 ORTHO05D005221 5.1e-12 76.3 61 59.0
COL.COLO4_06915 Corchorus olitorius HOM05D004101 ORTHO05D005221 8.7e-12 75.5 53 71.7
TPR.G31924 Trifolium pratense HOM05D004101 ORTHO05D005221 8.7e-12 75.5 56 64.3
Pp3c3_10160 Physcomitrium patens HOM05D004101 ORTHO05D005221 6.2e-10 69.3 78 43.6
SHI03798 Sapria himalayana HOM05D004101 ORTHO05D005221 1.8e-09 67.8 57 56.1
BolC2t10203H Brassica oleracea HOM05D004101 ORTHO05D027158 4.0e-09 66.6 63 50.8
BcaC05g27051 Brassica carinata HOM05D004101 ORTHO05D027158 9.0e-09 65.5 144 33.3
BolC2t10210H Brassica oleracea HOM05D004101 ORTHO05D027158 1.5e-08 64.7 53 56.6
A01p24750 Brassica napus HOM05D004101 ORTHO05D027158 2.2e-07 60.8 53 54.7


User provided reference genes

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