Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006575.2 Olea europaea HOM05D003972 ORTHO05D004609 1.1e-120 436.8 235 100.0
Oeu014581.1 Olea europaea HOM05D003972 ORTHO05D004609 7.6e-103 377.5 259 80.7
Oeu047573.1 Olea europaea HOM05D003972 ORTHO05D004609 1.9e-93 346.3 251 76.5
MSTRG.28071 Avicennia marina HOM05D003972 ORTHO05D004609 4.8e-89 331.6 246 74.0
MSTRG.5022 Avicennia marina HOM05D003972 ORTHO05D004609 9.0e-88 327.4 251 71.7
Migut.N01593 Erythranthe guttata HOM05D003972 ORTHO05D004609 1.5e-87 326.6 251 71.7
CSS0031611 Camellia sinensis var. sinensis HOM05D003972 ORTHO05D004609 3.2e-85 318.9 250 71.6
SalBow6G4991 Salvia bowleyana HOM05D003972 ORTHO05D004609 4.2e-85 318.5 241 73.9
Nn2g15387 Nelumbo nucifera HOM05D003972 ORTHO05D004609 1.3e-83 313.5 242 69.8
SalBow5G3531 Salvia bowleyana HOM05D003972 ORTHO05D004609 1.8e-83 313.2 252 71.0
Actinidia20668 Actinidia chinensis HOM05D003972 ORTHO05D004609 3.9e-83 312.0 252 70.2
SalBow8G4898 Salvia bowleyana HOM05D003972 ORTHO05D004609 6.7e-83 311.2 237 73.4
Manes.10G143400 Manihot esculenta HOM05D003972 ORTHO05D004609 2.4e-80 302.8 249 68.3
Nn7g36192 Nelumbo nucifera HOM05D003972 ORTHO05D004609 2.4e-80 302.8 242 67.4
AUR62009382 Chenopodium quinoa HOM05D003972 ORTHO05D004609 1.2e-79 300.4 233 67.4
Thecc.01G411300 Theobroma cacao HOM05D003972 ORTHO05D004609 2.6e-79 299.3 245 67.3
Sopen01g034180 Solanum pennellii HOM05D003972 ORTHO05D004609 4.5e-79 298.5 239 66.1
Duzib138G0053 Durio zibethinus HOM05D003972 ORTHO05D004609 7.6e-79 297.7 247 65.6
Prupe.2G012700 Prunus persica HOM05D003972 ORTHO05D004609 1.0e-78 297.4 252 65.5
Solyc01g087120.3 Solanum lycopersicum HOM05D003972 ORTHO05D004609 2.2e-78 296.2 239 65.7
Gohir.D12G096966 Gossypium hirsutum HOM05D003972 ORTHO05D004609 3.8e-78 295.4 246 66.7
MD07G1010400 Malus domestica HOM05D003972 ORTHO05D004609 3.8e-78 295.4 252 65.1
PGSC0003DMG400006869 Solanum tuberosum HOM05D003972 ORTHO05D004609 3.8e-78 295.4 239 64.9
Gorai.008G105300 Gossypium raimondii HOM05D003972 ORTHO05D004609 4.9e-78 295.0 246 66.7
PGR044G2681 Punica granatum HOM05D003972 ORTHO05D004609 4.9e-78 295.0 248 66.5
Rhsim07G0055300 Rhododendron simsii HOM05D003972 ORTHO05D004609 4.9e-78 295.0 250 66.0
Hund16627 Selenicereus undatus HOM05D003972 ORTHO05D004609 4.9e-78 295.0 245 65.7
MD02G1312800 Malus domestica HOM05D003972 ORTHO05D004609 6.5e-78 294.7 252 65.1
CAN.G1560.6 Capsicum annuum HOM05D003972 ORTHO05D004609 8.4e-78 294.3 236 66.1
EL10Ac3g05626 Beta vulgaris HOM05D003972 ORTHO05D004609 1.1e-77 293.9 242 66.1
Gohir.A12G094100 Gossypium hirsutum HOM05D003972 ORTHO05D004609 1.1e-77 293.9 245 65.7
Lsat_1_v5_gn_1_107421 Lactuca sativa HOM05D003972 ORTHO05D004609 3.2e-77 292.4 252 63.9
RcHm_v2.0_Chr1g0315911 Rosa chinensis HOM05D003972 ORTHO05D004609 4.2e-77 292.0 252 65.1
TAR633G1993 Trochodendron aralioides HOM05D003972 ORTHO05D004609 9.3e-77 290.8 251 63.3
Nitab4.5_0000634g0150 Nicotiana tabacum HOM05D003972 ORTHO05D004609 1.2e-76 290.4 237 65.8
Peaxi162Scf00428g00211 Petunia axillaris HOM05D003972 ORTHO05D004609 1.2e-76 290.4 234 66.2
TAR633G2347 Trochodendron aralioides HOM05D003972 ORTHO05D004609 2.7e-76 289.3 251 62.9
Lj7A570T56 Lonicera japonica HOM05D003972 ORTHO05D004609 3.5e-76 288.9 259 62.9
DCAR_006337 Daucus carota HOM05D003972 ORTHO05D004609 1.3e-75 287.0 232 65.5
HanXRQChr16g0524521 Helianthus annuus HOM05D003972 ORTHO05D004609 1.3e-75 287.0 251 62.9
vmacro13664 Vaccinium macrocarpon HOM05D003972 ORTHO05D004609 1.3e-75 287.0 253 62.5
ClCG09G004190 Citrullus lanatus HOM05D003972 ORTHO05D004609 2.3e-75 286.2 252 62.7
Sed0003633 Sechium edule HOM05D003972 ORTHO05D004609 2.3e-75 286.2 234 67.1
HanXRQChr17g0562951 Helianthus annuus HOM05D003972 ORTHO05D004609 3.0e-75 285.8 253 63.6
Sc11g0009210 Simmondsia chinensis HOM05D003972 ORTHO05D004609 3.0e-75 285.8 190 77.4
unitig_8.g3624 Utricularia gibba HOM05D003972 ORTHO05D004609 3.0e-75 285.8 249 63.1
Atru.chr11.2659 Acer truncatum HOM05D003972 ORTHO05D004609 3.9e-75 285.4 240 64.6
Hund14179 Selenicereus undatus HOM05D003972 ORTHO05D004609 5.1e-75 285.0 243 63.8
HanXRQChr01g0016231 Helianthus annuus HOM05D003972 ORTHO05D004609 1.1e-74 283.9 251 62.2
Duzib268G1708 Durio zibethinus HOM05D003972 ORTHO05D004609 1.9e-74 283.1 245 65.7
AUR62027358 Chenopodium quinoa HOM05D003972 ORTHO05D004609 5.7e-74 281.6 227 64.8
Ciclev10032620m.g Citrus clementina HOM05D003972 ORTHO05D004609 5.7e-74 281.6 233 66.5
FAN01G2341 Fragaria x ananassa HOM05D003972 ORTHO05D004609 9.6e-74 280.8 252 62.3
CiPaw.13G004600 Carya illinoinensis HOM05D003972 ORTHO05D004609 1.3e-73 280.4 242 61.6
Haze_03211 Corylus avellana HOM05D000015 ORTHO05D004609 2.8e-73 279.3 275 57.8
FvH4_7g01010 Fragaria vesca HOM05D003972 ORTHO05D004609 2.8e-73 279.3 246 63.0
MBI04_g36067_MAGBIO Magnolia biondii HOM05D003972 ORTHO05D004609 2.8e-73 279.3 254 61.8
FAN03G0639 Fragaria x ananassa HOM05D003972 ORTHO05D004609 8.2e-73 277.7 252 61.1
FAN06G4274 Fragaria x ananassa HOM05D003972 ORTHO05D004609 1.1e-72 277.3 246 62.6
FAN10G2592 Fragaria x ananassa HOM05D003972 ORTHO05D004609 1.1e-72 277.3 246 62.6
TWI09G1021 Tripterygium wilfordii HOM05D003972 ORTHO05D004609 1.4e-72 276.9 250 61.2
AUR62027419 Chenopodium quinoa HOM05D003972 ORTHO05D004609 1.8e-72 276.6 240 61.7
MELO3C023548.2 Cucumis melo HOM05D003972 ORTHO05D004609 2.4e-72 276.2 252 59.5
Nitab4.5_0002179g0040 Nicotiana tabacum HOM05D003972 ORTHO05D004609 2.4e-72 276.2 273 57.5
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 6.9e-72 274.6 191 73.8
TWI73G1179 Tripterygium wilfordii HOM05D003972 ORTHO05D004609 6.9e-72 274.6 249 60.6
Potri.009G061600 Populus trichocarpa HOM05D003972 ORTHO05D004609 1.2e-71 273.9 249 59.0
Sabra09G0045500 Salix brachista HOM05D003972 ORTHO05D004609 1.2e-71 273.9 249 59.4
ECA248G3800 Erigeron canadensis HOM05D003972 ORTHO05D004609 1.5e-71 273.5 243 61.7
PGR042G2196 Punica granatum HOM05D003972 ORTHO05D004609 1.5e-71 273.5 246 62.6
Aqoxy2G00123 Aquilegia oxysepala HOM05D003972 ORTHO05D004609 4.5e-71 271.9 255 60.0
GSVIVG01032087001 Vitis vinifera HOM05D003972 ORTHO05D004609 1.0e-70 270.8 250 60.4
MBI01_g18885_MAGBIO Magnolia biondii HOM05D003972 ORTHO05D004609 2.9e-70 269.2 249 61.4
ClCG10G012410 Citrullus lanatus HOM05D003972 ORTHO05D004609 5.0e-70 268.5 266 58.6
COL.COLO4_23932 Corchorus olitorius HOM05D003972 ORTHO05D004609 5.0e-70 268.5 277 57.4
CANSAT80G0274 Cannabis sativa HOM05D003972 ORTHO05D004609 1.1e-69 267.3 250 59.6
CsaV3_7G031080 Cucumis sativus L. HOM05D003972 ORTHO05D004609 1.4e-69 266.9 252 58.3
Sed0017110 Sechium edule HOM05D003972 ORTHO05D004609 1.4e-69 266.9 252 59.5
HPP92_003787 Vanilla planifolia HOM05D003972 ORTHO05D004609 9.3e-69 264.2 243 58.4
QL04p006659 Quercus lobata HOM05D003972 ORTHO05D004609 1.6e-68 263.5 188 74.5
vmacro21185 Vaccinium macrocarpon HOM05D003972 ORTHO05D004609 1.6e-68 263.5 341 49.0
Os06g0646500 Oryza sativa ssp. japonica HOM05D003972 ORTHO05D004609 3.5e-68 262.3 229 61.1
SGA_v2.0_scaffold24G10676 Striga asiatica HOM05D003972 ORTHO05D004609 6.1e-68 261.5 231 64.9
PSO384G2850 Papaver somniferum HOM05D003972 ORTHO05D004609 7.9e-68 261.2 241 59.8
ATR0605G205 Amborella trichopoda HOM05D003972 ORTHO05D004609 1.3e-67 260.4 249 56.6
PSO339G6021 Papaver somniferum HOM05D003972 ORTHO05D004609 3.0e-67 259.2 241 59.3
SGA_v2.0_scaffold5G02971 Striga asiatica HOM05D003972 ORTHO05D004609 3.0e-67 259.2 362 47.2
THA.LOC104809854 Tarenaya hassleriana HOM05D003972 ORTHO05D004609 6.7e-67 258.1 241 59.3
Glyma.15G273900 Glycine max HOM05D003972 ORTHO05D004609 8.7e-67 257.7 248 57.7
Ca_14380_v3 Cicer arietinum L. HOM05D003972 ORTHO05D004609 2.5e-66 256.1 248 56.9
Lsat_1_v5_gn_1_107400 Lactuca sativa HOM05D003972 ORTHO05D004609 3.3e-66 255.8 254 57.9
arahy.Tifrunner.gnm1.ann1.9I3PL7 Arachis hypogaea HOM05D003972 ORTHO05D004609 7.4e-66 254.6 248 57.7
arahy.Tifrunner.gnm1.ann1.XF35YI Arachis hypogaea HOM05D003972 ORTHO05D004609 7.4e-66 254.6 248 57.7
Lj9A631T54 Lonicera japonica HOM05D003972 ORTHO05D004609 1.3e-65 253.8 256 57.8
Ah.06g182390 Amaranthus hybridus HOM05D003972 ORTHO05D004609 4.8e-65 251.9 257 54.5
Glyma.08G155200 Glycine max HOM05D003972 ORTHO05D004609 6.3e-65 251.5 245 57.1
CDE05G0778 Ceratophyllum demersum HOM05D003972 ORTHO05D004609 1.8e-64 250.0 249 55.0
THA.LOC104819071 Tarenaya hassleriana HOM05D003972 ORTHO05D004609 3.1e-64 249.2 242 57.4
TPR.G12160 Trifolium pratense HOM05D003972 ORTHO05D004609 3.1e-64 249.2 248 54.8
A03p05990 Brassica napus HOM05D003972 ORTHO05D004609 5.3e-64 248.4 243 55.6
BraA03t09936Z Brassica rapa HOM05D003972 ORTHO05D004609 5.3e-64 248.4 243 56.0
Medtr3g028730 Medicago truncatula HOM05D003972 ORTHO05D004609 5.3e-64 248.4 248 55.2
Zm00001eb188600 Zea mays HOM05D003972 ORTHO05D004609 6.9e-64 248.1 231 58.9
BcaC04g19115 Brassica carinata HOM05D003972 ORTHO05D004609 9.0e-64 247.7 240 57.1
Phvul.005G021000 Phaseolus vulgaris HOM05D003972 ORTHO05D004609 9.0e-64 247.7 248 56.0
Psat5g207400 Pisum sativum HOM05D003972 ORTHO05D004609 1.2e-63 247.3 247 55.9
CDE05G2400 Ceratophyllum demersum HOM05D003972 ORTHO05D004609 1.5e-63 246.9 250 54.4
VMungo1080G1024 Vigna mungo HOM05D003972 ORTHO05D004609 2.0e-63 246.5 248 56.0
Lj4g0010030 Lotus japonicus HOM05D003972 ORTHO05D004609 2.6e-63 246.1 238 58.0
Lalb_Chr08g0232821 Lupinus albus HOM05D003972 ORTHO05D004609 3.4e-63 245.7 249 55.8
SalBow5G0402 Salvia bowleyana HOM05D003972 ORTHO05D004609 3.4e-63 245.7 200 69.5
Sp6g30570 Schrenkiella parvula HOM05D003972 ORTHO05D004609 1.0e-62 244.2 243 54.7
Ah.06g182400 Amaranthus hybridus HOM05D003972 ORTHO05D004609 1.3e-62 243.8 271 52.0
BraA10t44544Z Brassica rapa HOM05D003972 ORTHO05D004609 1.3e-62 243.8 243 56.0
Lalb_Chr11g0073961 Lupinus albus HOM05D003972 ORTHO05D004609 1.7e-62 243.4 248 55.2
BolC9t59206H Brassica oleracea HOM05D003972 ORTHO05D004609 2.2e-62 243.0 243 55.1
C09p63620 Brassica napus HOM05D003972 ORTHO05D004609 2.9e-62 242.7 243 55.6
RcHm_v2.0_Chr7g0187561 Rosa chinensis HOM05D003972 ORTHO05D004609 2.9e-62 242.7 250 55.2
Thhalv10014516m.g Eutrema salsugineum HOM05D003972 ORTHO05D004609 5.0e-62 241.9 243 53.9
A10p24800 Brassica napus HOM05D003972 ORTHO05D004609 6.5e-62 241.5 243 55.6
Aa31LG5G18610 Aethionema arabicum HOM05D003972 ORTHO05D004609 1.4e-61 240.4 263 52.1
BcaNung01885 Brassica carinata HOM05D003972 ORTHO05D004609 4.2e-61 238.8 237 56.1
Carub.0006s1161 Capsella rubella HOM05D003972 ORTHO05D004609 9.4e-61 237.7 244 52.5
C03p07030 Brassica napus HOM05D003972 ORTHO05D004609 1.6e-60 236.9 243 56.0
BolC3t13201H Brassica oleracea HOM05D003972 ORTHO05D004609 1.6e-60 236.9 243 56.0
FAN18G0724 Fragaria x ananassa HOM05D003972 ORTHO05D004609 3.6e-60 235.7 244 55.3
A02p01940 Brassica napus HOM05D003972 ORTHO05D004609 1.4e-59 233.8 237 54.4
BraA02t05167Z Brassica rapa HOM05D003972 ORTHO05D004609 1.4e-59 233.8 237 54.4
CARHR199980 Cardamine hirsuta HOM05D003972 ORTHO05D004609 2.3e-59 233.0 242 52.5
FvH4_5g10590 Fragaria vesca HOM05D003972 ORTHO05D004609 2.3e-59 233.0 255 52.9
BcaNung01153 Brassica carinata HOM05D003972 ORTHO05D004609 3.9e-59 232.3 238 53.8
BolC2t06557H Brassica oleracea HOM05D003972 ORTHO05D004609 3.9e-59 232.3 238 53.8
Aa31LG3G15250 Aethionema arabicum HOM05D003972 ORTHO05D004609 5.1e-59 231.9 256 52.7
AL6G24070 Arabidopsis lyrata HOM05D003972 ORTHO05D004609 5.1e-59 231.9 244 51.6
AT5G13450 Arabidopsis thaliana HOM05D003972 ORTHO05D004609 6.7e-59 231.5 238 52.5
FAN13G3241 Fragaria x ananassa HOM05D003972 ORTHO05D004609 3.3e-58 229.2 255 52.2
SHI04087 Sapria himalayana HOM05D003972 ORTHO05D004609 9.7e-58 227.6 187 62.0
FAN04G1554 Fragaria x ananassa HOM05D003972 ORTHO05D004609 2.2e-57 226.5 255 52.2
Cc02_g27920 Coffea canephora HOM05D003972 ORTHO05D004609 4.8e-57 225.3 209 63.6
BcaB01g05358 Brassica carinata HOM05D003972 ORTHO05D004609 1.8e-56 223.4 247 53.8
SEGI_23171 Sequoiadendron giganteum HOM05D003972 ORTHO05D004609 2.5e-53 213.0 188 61.2
Rhsim01G0129500 Rhododendron simsii HOM05D003972 ORTHO05D004609 1.2e-52 210.7 299 46.8
Sed0014658 Sechium edule HOM05D003972 ORTHO05D004609 1.2e-52 210.7 223 56.1
SEGI_22482 Sequoiadendron giganteum HOM05D003972 ORTHO05D004609 8.8e-51 204.5 188 60.6
Cpa.g.sc245.17 Carica papaya HOM05D003972 ORTHO05D004609 5.5e-45 185.3 245 48.6
Pp3c21_15430 Physcomitrium patens HOM05D003972 ORTHO05D004609 1.2e-44 184.1 214 45.8
Pp3c21_13430 Physcomitrium patens HOM05D003972 ORTHO05D004609 5.2e-43 178.7 224 44.2
Dinv43448 Davidia involucrata HOM05D003972 ORTHO05D004609 1.4e-40 170.6 176 57.4
MELO3C030924.2 Cucumis melo HOM05D003972 ORTHO05D004609 4.1e-40 169.1 142 64.8
Mapoly0003s0068 Marchantia polymorpha HOM05D003972 ORTHO05D004609 1.6e-39 167.2 187 47.6
Haze_18530 Corylus avellana HOM05D003972 ORTHO05D004609 2.0e-39 166.8 115 73.9
Haze_20480 Corylus avellana HOM05D003972 ORTHO05D004609 3.8e-38 162.5 115 72.2
CBR_g17944 Chara braunii HOM05D003972 ORTHO05D004609 1.1e-37 161.0 210 41.9
BcaB06g27143 Brassica carinata HOM05D003972 ORTHO05D004609 1.0e-35 154.5 141 57.4
CsaV3_3G032180 Cucumis sativus L. HOM05D003972 ORTHO05D004609 9.1e-32 141.4 105 67.6
C02p06160 Brassica napus HOM05D003406 ORTHO05D004026 2.0e-31 140.2 105 66.7
Actinidia21554 Actinidia chinensis HOM05D003972 ORTHO05D004609 2.7e-31 139.8 195 47.2
Eucgr.I01987 Eucalyptus grandis HOM05D003972 ORTHO05D004609 2.9e-30 136.3 145 54.5
AagrBONN_evm.TU.Sc2ySwM_344.1217 Anthoceros agrestis HOM05D003972 ORTHO05D004609 2.5e-29 133.3 157 45.2
QL04p007936 Quercus lobata HOM05D003972 ORTHO05D004609 2.5e-29 133.3 146 53.4
Pp3c11_16260 Physcomitrium patens HOM05D003972 ORTHO05D004609 3.6e-28 129.4 187 36.4
MCO05G116 Micromonas commoda HOM05D003972 ORTHO05D004609 3.4e-26 122.9 184 37.0
GSVIVG01024256001 Vitis vinifera HOM05D003972 ORTHO05D004609 4.9e-25 119.0 85 70.6
SMO228G0064 Selaginella moellendorffii HOM05D003972 ORTHO05D004609 1.4e-24 117.5 186 33.3
Cpa.g.c41216 Carica papaya HOM05D003972 ORTHO05D004609 1.8e-24 117.1 70 82.9
Sc10g0000050 Simmondsia chinensis HOM05D003972 ORTHO05D004609 1.0e-22 111.3 69 79.7
PRCOL_00004246 Prasinoderma coloniale HOM05D003972 ORTHO05D004609 4.3e-21 105.9 181 38.1
Cre16.g680000 Chlamydomonas reinhardtii HOM05D003972 ORTHO05D004609 1.4e-16 90.9 204 28.9
Rhsim01G0081100 Rhododendron simsii HOM05D003972 ORTHO05D004609 1.4e-16 90.9 70 68.6
Rhsim02G0189700 Rhododendron simsii HOM05D003972 ORTHO05D004609 1.8e-16 90.5 74 63.5
Rhsim02G0048300 Rhododendron simsii HOM05D003972 ORTHO05D004609 4.1e-16 89.4 70 65.7
Rhsim01G0052900 Rhododendron simsii HOM05D003972 ORTHO05D004609 9.2e-16 88.2 70 65.7
CsaV3_3G032190 Cucumis sativus L. HOM05D003972 ORTHO05D004609 2.0e-15 87.0 109 47.7
Manes.07G005701 Manihot esculenta HOM05D003972 ORTHO05D004609 1.3e-14 84.3 104 51.9
MELO3C030665.2 Cucumis melo HOM05D003972 ORTHO05D004609 8.6e-14 81.6 54 74.1
MCO11G452 Micromonas commoda HOM05D003160 ORTHO05D005967 1.9e-13 80.5 181 28.2
BcaB01g02352 Brassica carinata HOM05D003895 ORTHO05D004723 4.3e-13 79.3 66 59.1
BcaB01g00975 Brassica carinata HOM05D003895 ORTHO05D004723 3.6e-12 76.3 66 57.6
BcaB05g22068 Brassica carinata HOM05D003895 ORTHO05D004723 2.0e-10 70.5 72 55.6
Cre11.g467569 Chlamydomonas reinhardtii HOM05D003160 ORTHO05D005967 6.4e-09 65.5 190 26.8
arahy.Tifrunner.gnm1.ann1.2I1I1C Arachis hypogaea HOM05D003160 ORTHO05D005967 1.9e-08 63.9 172 25.0
PRCOL_00001524 Prasinoderma coloniale HOM05D003160 ORTHO05D005967 7.0e-08 62.0 165 26.1
Pp3c23_11680 Physcomitrium patens HOM05D003160 ORTHO05D005967 2.7e-07 60.1 211 22.3
Pp3c23_6060 Physcomitrium patens HOM05D003160 ORTHO05D005967 3.0e-06 56.6 166 23.5


User provided reference genes

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