Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006531.1 Olea europaea HOM05D005515 ORTHO05D006620 4.7e-35 150.6 74 100.0
COL.COLO4_20393 Corchorus olitorius HOM05D005515 ORTHO05D006620 1.0e-21 106.3 65 78.5
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 1.3e-21 105.9 60 85.0
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 6.6e-21 103.6 62 80.6
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 6.6e-21 103.6 61 83.6
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 8.7e-21 103.2 61 77.0
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 1.5e-20 102.4 59 83.1
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.9e-20 102.1 60 80.0
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 3.3e-20 101.3 61 78.7
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 3.3e-20 101.3 61 78.7
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 5.6e-20 100.5 61 77.0
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 9.6e-20 99.8 61 75.4
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 1.3e-19 99.4 67 70.1
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 3.6e-19 97.8 61 73.8
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.1e-18 96.3 61 75.4
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 1.1e-18 96.3 61 68.9
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 2.4e-18 95.1 61 67.2
ClCG08G010060 Citrullus lanatus HOM05D005515 ORTHO05D006620 3.1e-18 94.7 89 59.6
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 3.1e-18 94.7 61 73.8
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 5.3e-18 94.0 59 72.9
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 5.3e-18 94.0 59 74.6
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 5.3e-18 94.0 61 65.6
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 5.3e-18 94.0 61 68.9
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 7.6e-17 90.1 61 70.5
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 2.9e-16 88.2 53 77.4
CSS0003202 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 4.9e-16 87.4 51 80.4
CSS0037049 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 4.9e-16 87.4 51 80.4
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 4.2e-15 84.3 48 77.1
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 4.2e-15 84.3 48 79.2
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 7.1e-15 83.6 61 68.9
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 9.3e-15 83.2 57 63.2
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 2.1e-14 82.0 61 68.9
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 2.7e-14 81.6 46 78.3
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 3.5e-14 81.3 48 77.1
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 1.0e-13 79.7 48 70.8
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.3e-13 79.3 59 67.8
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 1.8e-13 79.0 60 70.0
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 1.1e-12 76.3 61 63.9
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 1.5e-12 75.9 61 65.6
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 1.9e-12 75.5 109 41.3
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 9.6e-12 73.2 61 59.0
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 1.6e-11 72.4 90 46.7
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 2.8e-11 71.6 61 62.3
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 4.8e-11 70.9 48 60.4
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 1.4e-10 69.3 76 51.3
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 4.0e-10 67.8 61 55.7
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 4.0e-10 67.8 61 57.4
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 5.3e-10 67.4 61 57.4
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 9.0e-10 66.6 61 57.4
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 1.2e-09 66.2 61 57.4
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 1.2e-09 66.2 61 54.1
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 2.0e-09 65.5 61 55.7
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 2.0e-09 65.5 61 55.7
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 2.6e-09 65.1 61 57.4
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 2.6e-09 65.1 61 57.4
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 2.6e-09 65.1 61 57.4
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 2.6e-09 65.1 57 49.1
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 3.4e-09 64.7 61 55.7
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 3.4e-09 64.7 61 54.1
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 5.8e-09 63.9 61 55.7
PRCOL_00000741 Prasinoderma coloniale HOM05D005515 ORTHO05D006620 7.6e-09 63.5 54 53.7
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 1.7e-08 62.4 61 49.2
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 2.2e-08 62.0 61 52.5
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 2.2e-08 62.0 61 54.1
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 2.2e-08 62.0 61 54.1
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 3.8e-08 61.2 61 52.5
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 4.9e-08 60.8 62 50.0
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 4.9e-08 60.8 61 52.5
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 6.5e-08 60.5 63 50.8
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 8.4e-08 60.1 61 50.8
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 8.4e-08 60.1 61 49.2
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 8.4e-08 60.1 61 50.8
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 8.4e-08 60.1 59 49.2
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.1e-07 59.7 61 52.5
BcaC06g31020 Brassica carinata HOM05D005515 ORTHO05D006620 1.4e-07 59.3 56 48.2
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 1.9e-07 58.9 61 49.2
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 2.5e-07 58.5 61 52.5
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 3.2e-07 58.2 61 50.8
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 4.2e-07 57.8 61 50.8
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 4.2e-07 57.8 61 49.2
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 5.5e-07 57.4 65 49.2
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 5.5e-07 57.4 61 49.2
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 5.5e-07 57.4 61 50.8
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 5.5e-07 57.4 59 49.2
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 5.5e-07 57.4 61 49.2
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 9.3e-07 56.6 61 50.8
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 9.3e-07 56.6 61 50.8
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 9.3e-07 56.6 63 46.0
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 9.3e-07 56.6 61 47.5
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 9.3e-07 56.6 61 49.2
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 1.2e-06 56.2 61 47.5
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 1.2e-06 56.2 61 49.2
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 1.2e-06 56.2 61 50.8
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 1.2e-06 56.2 61 50.8
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 2.1e-06 55.5 61 47.5
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 2.7e-06 55.1 61 45.9
Haze_27757 Corylus avellana HOM05D005515 ORTHO05D006620 2.7e-06 55.1 50 46.0
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.7e-06 55.1 61 47.5
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 2.7e-06 55.1 59 49.2
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 3.5e-06 54.7 61 49.2
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 3.5e-06 54.7 66 45.5
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 7.9e-06 53.5 61 44.3


User provided reference genes

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