Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006508.1 Olea europaea HOM05D006541 ORTHO05D008471 8.0e-211 736.9 381 100.0
MSTRG.11386 Avicennia marina HOM05D006541 ORTHO05D008471 6.8e-162 574.3 379 78.1
Cc04_g16740 Coffea canephora HOM05D006541 ORTHO05D008471 1.2e-155 553.5 379 73.9
Lj5A111T86 Lonicera japonica HOM05D006541 ORTHO05D008471 5.3e-154 548.1 382 74.1
Dinv38701 Davidia involucrata HOM05D006541 ORTHO05D008471 3.4e-153 545.4 380 75.3
SGA_v2.0_scaffold25G10913 Striga asiatica HOM05D006541 ORTHO05D008471 4.4e-153 545.0 389 74.0
Nitab4.5_0000842g0050 Nicotiana tabacum HOM05D006541 ORTHO05D008471 1.7e-149 533.1 397 69.3
Duzib205G0457 Durio zibethinus HOM05D006541 ORTHO05D008471 6.6e-149 531.2 392 71.4
Nitab4.5_0012137g0020 Nicotiana tabacum HOM05D006541 ORTHO05D008471 6.6e-149 531.2 397 68.5
Peaxi162Scf00274g00732 Petunia axillaris HOM05D006541 ORTHO05D008471 2.4e-146 522.7 396 67.9
Sopen03g035110 Solanum pennellii HOM05D006541 ORTHO05D008471 2.4e-146 522.7 391 68.8
CAN.G837.10 Capsicum annuum HOM05D006541 ORTHO05D008471 5.3e-146 521.5 391 67.3
Solyc03g116140.3 Solanum lycopersicum HOM05D006541 ORTHO05D008471 6.9e-146 521.2 391 68.8
Atru.chr9.2260 Acer truncatum HOM05D006541 ORTHO05D008471 3.4e-145 518.8 398 67.8
Migut.I00173 Erythranthe guttata HOM05D006541 ORTHO05D008471 1.7e-144 516.5 383 72.1
Gohir.A03G066400 Gossypium hirsutum HOM05D006541 ORTHO05D008471 3.8e-144 515.4 392 69.1
QL10p016702 Quercus lobata HOM05D006541 ORTHO05D008471 1.9e-143 513.1 392 67.6
Thecc.03G085100 Theobroma cacao HOM05D006541 ORTHO05D008471 5.4e-143 511.5 394 68.8
Rhsim08G0155500 Rhododendron simsii HOM05D006541 ORTHO05D008471 1.2e-142 510.4 362 72.9
Cfa018953 Carpinus fangiana HOM05D006541 ORTHO05D008471 2.1e-142 509.6 393 67.7
TAR629G1448 Trochodendron aralioides HOM05D006541 ORTHO05D008471 1.8e-141 506.5 376 68.4
GSVIVG01008019001 Vitis vinifera HOM05D006541 ORTHO05D008471 3.9e-141 505.4 379 68.3
DCAR_016545 Daucus carota HOM05D006541 ORTHO05D008471 1.5e-140 503.4 384 67.7
Hma1.2p1_0104F.1_g049970 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 2.5e-140 502.7 372 69.9
Gorai.003G096900 Gossypium raimondii HOM05D006541 ORTHO05D008471 5.6e-140 501.5 425 64.0
Ciclev10020397m.g Citrus clementina HOM05D006541 ORTHO05D008471 7.4e-140 501.1 405 65.4
TAR371G1054 Trochodendron aralioides HOM05D006541 ORTHO05D008471 7.4e-140 501.1 376 68.1
Gohir.D03G093000 Gossypium hirsutum HOM05D006541 ORTHO05D008471 2.1e-139 499.6 380 68.9
PGSC0003DMG400019513 Solanum tuberosum HOM05D006541 ORTHO05D008471 2.1e-139 499.6 391 66.5
CiPaw.11G043400 Carya illinoinensis HOM05D006541 ORTHO05D008471 8.1e-139 497.7 379 68.3
Nn4g23149 Nelumbo nucifera HOM05D006541 ORTHO05D008471 1.8e-138 496.5 378 67.5
Lj4g0004556 Lotus japonicus HOM05D006541 ORTHO05D008471 5.3e-138 495.0 390 66.4
VMungo1215G1397 Vigna mungo HOM05D006541 ORTHO05D008471 9.0e-138 494.2 390 66.7
Lsat_1_v5_gn_1_13281 Lactuca sativa HOM05D006541 ORTHO05D008471 4.5e-137 491.9 384 67.2
Psat4g051480 Pisum sativum HOM05D006541 ORTHO05D008471 5.8e-137 491.5 401 64.6
Prupe.5G192200 Prunus persica HOM05D006541 ORTHO05D008471 1.4e-135 486.9 385 66.8
arahy.Tifrunner.gnm1.ann1.84ES4F Arachis hypogaea HOM05D006541 ORTHO05D008471 4.2e-135 485.3 393 64.9
Lalb_Chr07g0178001 Lupinus albus HOM05D006541 ORTHO05D008471 4.2e-135 485.3 387 65.9
TWI60G0844 Tripterygium wilfordii HOM05D006541 ORTHO05D008471 5.5e-135 485.0 396 65.9
unitig_0.g2528 Utricularia gibba HOM05D006541 ORTHO05D008471 5.5e-135 485.0 376 68.4
arahy.Tifrunner.gnm1.ann1.ZY6HCY Arachis hypogaea HOM05D006541 ORTHO05D008471 7.1e-135 484.6 393 65.1
HanXRQChr02g0041061 Helianthus annuus HOM05D006541 ORTHO05D008471 9.3e-135 484.2 381 66.9
Phvul.003G190700 Phaseolus vulgaris HOM05D006541 ORTHO05D008471 9.3e-135 484.2 394 65.2
PGR083G1696 Punica granatum HOM05D006541 ORTHO05D008471 9.3e-135 484.2 380 65.8
PSO063G0566 Papaver somniferum HOM05D006541 ORTHO05D008471 2.1e-134 483.0 374 64.4
Glyma.17G099300 Glycine max HOM05D006541 ORTHO05D008471 2.7e-134 482.6 390 65.4
MBI05_g08285_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 2.7e-134 482.6 380 65.5
MD14G1199100 Malus domestica HOM05D006541 ORTHO05D008471 6.0e-134 481.5 387 64.6
Aqoxy3G03367 Aquilegia oxysepala HOM05D006541 ORTHO05D008471 1.3e-133 480.3 377 66.3
CSS0042048 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 3.0e-133 479.2 396 65.7
Hund02657 Selenicereus undatus HOM05D006541 ORTHO05D008471 3.9e-133 478.8 379 66.2
Eucgr.B00491 Eucalyptus grandis HOM05D006541 ORTHO05D008471 1.5e-132 476.9 385 66.0
Ca_21826_v3 Cicer arietinum L. HOM05D006541 ORTHO05D008471 5.6e-132 474.9 400 62.8
CSS0004518 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 2.1e-131 473.0 380 66.3
RcHm_v2.0_Chr7g0181151 Rosa chinensis HOM05D006541 ORTHO05D008471 6.2e-131 471.5 392 64.8
FAN04G2599 Fragaria x ananassa HOM05D006541 ORTHO05D008471 1.4e-130 470.3 389 63.5
Actinidia37633 Actinidia chinensis HOM05D006541 ORTHO05D008471 2.4e-130 469.5 384 66.4
TPR.G34732 Trifolium pratense HOM05D006541 ORTHO05D008471 5.3e-130 468.4 405 61.5
AUR62021701 Chenopodium quinoa HOM05D006541 ORTHO05D008471 1.2e-129 467.2 379 64.1
Medtr4g108590 Medicago truncatula HOM05D006541 ORTHO05D008471 1.5e-129 466.8 403 62.5
AUR62008395 Chenopodium quinoa HOM05D006541 ORTHO05D008471 2.0e-129 466.5 379 64.4
FAN18G0374 Fragaria x ananassa HOM05D006541 ORTHO05D008471 2.0e-129 466.5 392 63.5
ECA247G0129 Erigeron canadensis HOM05D006541 ORTHO05D008471 4.5e-129 465.3 381 64.6
FAN08G2919 Fragaria x ananassa HOM05D006541 ORTHO05D008471 8.4e-128 461.1 389 63.0
THA.LOC104821445 Tarenaya hassleriana HOM05D006541 ORTHO05D008471 2.5e-127 459.5 397 60.7
FvH4_5g15050 Fragaria vesca HOM05D006541 ORTHO05D008471 3.9e-125 452.2 392 62.2
Ah.11g048540 Amaranthus hybridus HOM05D006541 ORTHO05D008471 6.7e-125 451.4 381 63.5
BcaB01g00902 Brassica carinata HOM05D006541 ORTHO05D008471 1.1e-124 450.7 385 62.6
CARHR156290 Cardamine hirsuta HOM05D006541 ORTHO05D008471 1.9e-124 449.9 382 62.8
MD06G1192400 Malus domestica HOM05D006541 ORTHO05D008471 3.3e-124 449.1 415 59.0
AL5G26900 Arabidopsis lyrata HOM05D006541 ORTHO05D008471 9.7e-124 447.6 380 62.4
AT3G47610 Arabidopsis thaliana HOM05D006541 ORTHO05D008471 1.6e-123 446.8 380 62.4
EL10Ac5g10987 Beta vulgaris HOM05D006541 ORTHO05D008471 1.6e-123 446.8 381 62.2
BolC3t19470H Brassica oleracea HOM05D006541 ORTHO05D008471 2.8e-123 446.0 385 61.6
Carub.0005s1374 Capsella rubella HOM05D006541 ORTHO05D008471 4.8e-123 445.3 380 61.6
Haze_07335 Corylus avellana HOM05D006541 ORTHO05D008471 1.4e-122 443.7 343 67.6
Sp5g14300 Schrenkiella parvula HOM05D006541 ORTHO05D008471 1.4e-122 443.7 381 62.2
Thhalv10010423m.g Eutrema salsugineum HOM05D006541 ORTHO05D008471 5.3e-122 441.8 385 61.3
A06p20010 Brassica napus HOM05D006541 ORTHO05D008471 5.9e-121 438.3 385 61.3
BraA06t25087Z Brassica rapa HOM05D006541 ORTHO05D008471 5.9e-121 438.3 385 61.3
BcaC01g01798 Brassica carinata HOM05D006541 ORTHO05D008471 1.0e-120 437.6 385 60.8
C03p71820 Brassica napus HOM05D006541 ORTHO05D008471 1.0e-120 437.6 385 60.8
Sc12g0006320 Simmondsia chinensis HOM05D006541 ORTHO05D008471 1.0e-120 437.6 381 63.3
CDE06G2127 Ceratophyllum demersum HOM05D006541 ORTHO05D008471 5.0e-120 435.3 389 59.4
HPP92_016797 Vanilla planifolia HOM05D006541 ORTHO05D008471 5.0e-120 435.3 375 61.3
HPP92_016827 Vanilla planifolia HOM05D006541 ORTHO05D008471 3.2e-119 432.6 375 61.1
COL.COLO4_24520 Corchorus olitorius HOM05D000087 ORTHO05D008471 2.1e-118 429.9 385 62.1
Potri.012G068900 Populus trichocarpa HOM05D006541 ORTHO05D008471 3.6e-118 429.1 387 62.0
ClCG04G012330 Citrullus lanatus HOM05D006541 ORTHO05D008471 4.6e-118 428.7 349 66.8
CANSAT25G3319 Cannabis sativa HOM05D006541 ORTHO05D008471 5.1e-117 425.2 395 57.0
CsaV3_1G005390 Cucumis sativus L. HOM05D006541 ORTHO05D008471 1.1e-116 424.1 386 61.9
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 5.7e-116 421.8 356 64.3
ATR0598G034 Amborella trichopoda HOM05D006541 ORTHO05D008471 2.4e-114 416.4 377 59.7
Sabra12G0049100 Salix brachista HOM05D006541 ORTHO05D008471 2.4e-114 416.4 458 54.4
Cpa.g.c35819 Carica papaya HOM05D006541 ORTHO05D008471 3.8e-112 409.1 357 64.7
Sed0004898 Sechium edule HOM05D006541 ORTHO05D008471 1.4e-111 407.1 334 66.5
BcaB05g23063 Brassica carinata HOM05D006541 ORTHO05D008471 7.2e-111 404.8 363 59.5
Manes.06G093400 Manihot esculenta HOM05D006541 ORTHO05D008471 1.4e-109 400.6 354 62.4
Hma1.2p1_0104F.1_g049980 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 1.0e-104 384.4 291 70.1
vmacro17549 Vaccinium macrocarpon HOM05D006541 ORTHO05D008471 6.7e-101 371.7 400 53.8
Actinidia04898 Actinidia chinensis HOM05D006541 ORTHO05D008471 6.3e-99 365.2 248 75.4
Aa31LG4G16360 Aethionema arabicum HOM05D006541 ORTHO05D008471 1.5e-95 354.0 420 48.6
Zm00001eb312480 Zea mays HOM05D006541 ORTHO05D008471 1.4e-85 320.9 299 55.5
Mapoly0060s0059 Marchantia polymorpha HOM05D006541 ORTHO05D003603 1.8e-77 293.9 399 43.4
Pp3c16_180 Physcomitrium patens HOM05D006541 ORTHO05D003603 6.8e-77 292.0 387 41.9
Pp3c16_188 Physcomitrium patens HOM05D006541 ORTHO05D003603 6.8e-77 292.0 387 41.9
AagrBONN_evm.TU.Sc2ySwM_228.4960 Anthoceros agrestis HOM05D006541 ORTHO05D008471 1.7e-75 287.3 384 45.1
SEGI_30902 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 6.3e-75 285.4 335 49.6
Potri.003G168100 Populus trichocarpa HOM05D006541 ORTHO05D008471 6.4e-67 258.8 157 82.2
CBR_g8828 Chara braunii HOM05D003341 ORTHO05D003603 1.4e-37 161.4 378 31.7
Actinidia04899 Actinidia chinensis HOM05D006541 ORTHO05D008471 1.3e-32 144.8 117 65.8
SEGI_16548 Sequoiadendron giganteum HOM05D003341 ORTHO05D003603 2.5e-31 140.6 345 32.8
Cpa.g.sc111.3 Carica papaya HOM05D006541 ORTHO05D008471 2.1e-30 137.5 115 64.3
Os09g0413100 Oryza sativa ssp. japonica HOM05D006541 ORTHO05D008471 1.1e-26 125.2 137 50.4
Sed0007979 Sechium edule HOM05D006541 ORTHO05D008471 2.2e-19 100.9 83 61.4
Cre09.g412350 Chlamydomonas reinhardtii HOM05D003341 ORTHO05D003603 6.0e-17 92.8 167 37.7
PRCOL_00002459 Prasinoderma coloniale HOM05D006541 ORTHO05D008471 2.5e-15 87.4 141 38.3
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 2.1e-14 84.3 50 74.0
MELO3C035773.2 Cucumis melo HOM05D006541 ORTHO05D008471 2.0e-12 77.8 50 72.0
CsaV3_1G005410 Cucumis sativus L. HOM05D006541 ORTHO05D008471 2.0e-12 77.8 50 72.0
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 4.5e-12 76.6 158 41.8
Haze_07334 Corylus avellana HOM05D006541 ORTHO05D008471 5.8e-12 76.3 52 69.2
SEGI_20393 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 7.2e-10 69.3 46 69.6
FAN14G0637 Fragaria x ananassa HOM05D006541 ORTHO05D008471 4.6e-09 66.6 95 51.6
Cfa027053 Carpinus fangiana HOM05D006541 ORTHO05D124901 1.3e-06 58.5 324 23.1


User provided reference genes

Program Settings