Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006417.1 Olea europaea HOM05D005099 ORTHO05D006087 4.2e-101 371.3 181 100.0
Oeu053996.1 Olea europaea HOM05D005099 ORTHO05D006087 9.1e-64 247.3 181 70.7
Hma1.2p1_0804F.1_g221070 Hydrangea macrophylla HOM05D005099 ORTHO05D006087 5.0e-62 241.5 181 71.3
Haze_01169 Corylus avellana HOM05D005099 ORTHO05D006087 2.0e-58 229.6 188 67.0
Thecc.04G288600 Theobroma cacao HOM05D005099 ORTHO05D006087 5.7e-58 228.0 192 66.7
Rhsim02G0007200 Rhododendron simsii HOM05D005099 ORTHO05D006087 1.3e-57 226.9 176 67.0
Dinv44353 Davidia involucrata HOM05D005099 ORTHO05D006087 2.2e-57 226.1 194 66.5
Duzib151G0929 Durio zibethinus HOM05D005099 ORTHO05D006087 1.1e-56 223.8 194 65.5
Manes.15G010800 Manihot esculenta HOM05D005099 ORTHO05D006087 1.4e-56 223.4 178 65.2
Actinidia14282 Actinidia chinensis HOM05D005099 ORTHO05D006087 2.4e-56 222.6 176 65.9
Duzib212G0134 Durio zibethinus HOM05D005099 ORTHO05D006087 3.1e-56 222.2 186 66.7
Ciclev10006010m.g Citrus clementina HOM05D005099 ORTHO05D006087 2.0e-55 219.5 184 65.2
CSS0011820 Camellia sinensis var. sinensis HOM05D005099 ORTHO05D006087 2.7e-55 219.2 179 65.9
CAN.G14.36 Capsicum annuum HOM05D005099 ORTHO05D006087 3.5e-55 218.8 193 65.3
CsaV3_6G023860 Cucumis sativus L. HOM05D005099 ORTHO05D006087 1.3e-54 216.9 184 67.4
CiPaw.01G145600 Carya illinoinensis HOM05D005099 ORTHO05D006087 2.9e-54 215.7 186 63.4
Oeu033813.1 Olea europaea HOM05D005099 ORTHO05D006087 6.5e-54 214.5 186 66.1
Peaxi162Scf00065g00138 Petunia axillaris HOM05D005099 ORTHO05D006087 1.1e-53 213.8 199 62.8
Cfa015424 Carpinus fangiana HOM05D005099 ORTHO05D006087 1.9e-53 213.0 188 66.0
MELO3C021313.2 Cucumis melo HOM05D005099 ORTHO05D006087 1.6e-52 209.9 183 65.6
Dinv29728 Davidia involucrata HOM05D005099 ORTHO05D006087 2.1e-52 209.5 177 63.3
Glyma.15G150400 Glycine max HOM05D005099 ORTHO05D006087 4.7e-52 208.4 187 61.5
ClCG06G004980 Citrullus lanatus HOM05D005099 ORTHO05D006087 6.1e-52 208.0 181 66.3
CANSAT78G2455 Cannabis sativa HOM05D005099 ORTHO05D006087 1.4e-51 206.8 195 59.5
Medtr2g435810 Medicago truncatula HOM05D005099 ORTHO05D006087 1.8e-51 206.5 188 63.8
Medtr2g436150 Medicago truncatula HOM05D005099 ORTHO05D006087 1.8e-51 206.5 188 63.8
vmacro15214 Vaccinium macrocarpon HOM05D005099 ORTHO05D006087 3.0e-51 205.7 163 71.2
VMungo1309G2116 Vigna mungo HOM05D005099 ORTHO05D006087 4.0e-51 205.3 186 62.4
Glyma.09G042500 Glycine max HOM05D005099 ORTHO05D006087 8.8e-51 204.1 187 62.6
Phvul.009G250300 Phaseolus vulgaris HOM05D005099 ORTHO05D006087 8.8e-51 204.1 183 63.4
COL.COLO4_13826 Corchorus olitorius HOM05D005099 ORTHO05D006087 2.0e-50 203.0 193 62.2
SalBow2G2334 Salvia bowleyana HOM05D005099 ORTHO05D006087 5.7e-50 201.4 176 65.3
TWI73G1062 Tripterygium wilfordii HOM05D005099 ORTHO05D006087 5.7e-50 201.4 197 59.9
QL06p010333 Quercus lobata HOM05D005099 ORTHO05D006087 7.5e-50 201.1 198 60.6
Nitab4.5_0000695g0110 Nicotiana tabacum HOM05D005099 ORTHO05D006087 9.8e-50 200.7 191 63.4
CiPaw.02G080200 Carya illinoinensis HOM05D005099 ORTHO05D006087 6.3e-49 198.0 190 59.5
Sabra08G0151700 Salix brachista HOM05D005099 ORTHO05D006087 1.4e-48 196.8 191 59.2
Manes.03G198300 Manihot esculenta HOM05D005099 ORTHO05D006087 1.8e-48 196.4 182 57.1
Nitab4.5_0003767g0020 Nicotiana tabacum HOM05D005099 ORTHO05D006087 2.4e-48 196.1 191 62.8
Sed0019517 Sechium edule HOM05D005099 ORTHO05D006087 2.4e-48 196.1 181 60.2
SGA_v2.0_scaffold67G22601 Striga asiatica HOM05D005099 ORTHO05D006087 5.4e-48 194.9 180 62.8
TAR365G0602 Trochodendron aralioides HOM05D005099 ORTHO05D006087 5.4e-48 194.9 192 58.9
HanXRQChr17g0536041 Helianthus annuus HOM05D005099 ORTHO05D006087 1.2e-47 193.7 189 57.1
THA.LOC104827334 Tarenaya hassleriana HOM05D005099 ORTHO05D006087 1.2e-47 193.7 190 57.9
MSTRG.3894 Avicennia marina HOM05D005099 ORTHO05D006087 1.6e-47 193.4 184 59.2
TAR362G0212 Trochodendron aralioides HOM05D005099 ORTHO05D006087 1.6e-47 193.4 185 59.5
Potri.008G219500 Populus trichocarpa HOM05D005099 ORTHO05D006087 2.0e-47 193.0 188 58.5
Atru.chr4.2896 Acer truncatum HOM05D005099 ORTHO05D006087 3.5e-47 192.2 193 58.0
Nn3g21536 Nelumbo nucifera HOM05D005099 ORTHO05D006087 3.5e-47 192.2 184 59.8
Nn4g25764 Nelumbo nucifera HOM05D005099 ORTHO05D006087 1.7e-46 189.9 178 59.6
PGSC0003DMG400011309 Solanum tuberosum HOM05D005099 ORTHO05D006087 1.7e-46 189.9 179 61.5
Sopen01g028090 Solanum pennellii HOM05D005099 ORTHO05D006087 2.3e-46 189.5 188 61.7
Cc03_g01550 Coffea canephora HOM05D005099 ORTHO05D006087 6.6e-46 188.0 187 58.3
FAN07G0877 Fragaria x ananassa HOM05D005099 ORTHO05D006087 7.2e-45 184.5 187 57.8
Solyc01g066440.3 Solanum lycopersicum HOM05D005099 ORTHO05D006087 9.5e-45 184.1 186 60.2
FvH4_4g18620 Fragaria vesca HOM05D005099 ORTHO05D006087 1.6e-44 183.3 186 59.7
FAN12G1484 Fragaria x ananassa HOM05D005099 ORTHO05D006087 1.6e-44 183.3 186 59.7
FAN12G1671 Fragaria x ananassa HOM05D005099 ORTHO05D006087 1.6e-44 183.3 186 59.7
Potri.010G010600 Populus trichocarpa HOM05D005099 ORTHO05D006087 2.1e-44 183.0 191 55.5
MD16G1164800 Malus domestica HOM05D005099 ORTHO05D006087 1.4e-43 180.3 194 56.2
EL10Ac3g06640 Beta vulgaris HOM05D005099 ORTHO05D006087 2.3e-43 179.5 185 57.8
FAN17G2615 Fragaria x ananassa HOM05D005099 ORTHO05D006087 3.0e-43 179.1 182 57.1
Prupe.1G124100 Prunus persica HOM05D005099 ORTHO05D006087 3.0e-43 179.1 184 58.2
RcHm_v2.0_Chr4g0423321 Rosa chinensis HOM05D005099 ORTHO05D006087 3.0e-43 179.1 190 55.8
CSS0049831 Camellia sinensis var. sinensis HOM05D005099 ORTHO05D006087 2.0e-42 176.4 187 55.1
AUR62018071 Chenopodium quinoa HOM05D005099 ORTHO05D006087 4.4e-42 175.3 182 53.8
arahy.Tifrunner.gnm1.ann1.2UKM1V Arachis hypogaea HOM05D005099 ORTHO05D006087 5.7e-42 174.9 183 56.3
AUR62015274 Chenopodium quinoa HOM05D005099 ORTHO05D006087 9.8e-42 174.1 182 53.3
CARHR081450 Cardamine hirsuta HOM05D005099 ORTHO05D006087 1.7e-41 173.3 188 51.1
arahy.Tifrunner.gnm1.ann1.2F59RJ Arachis hypogaea HOM05D005099 ORTHO05D006087 6.3e-41 171.4 183 55.2
Psat1g155760 Pisum sativum HOM05D005099 ORTHO05D006087 1.1e-40 170.6 194 54.6
Ah.13g074810 Amaranthus hybridus HOM05D005099 ORTHO05D006087 4.1e-40 168.7 177 53.1
Sabra10G0006200 Salix brachista HOM05D005099 ORTHO05D006087 9.2e-40 167.5 190 51.6
Eucgr.H03959 Eucalyptus grandis HOM05D005099 ORTHO05D006087 1.2e-39 167.2 205 48.8
AL3G17960 Arabidopsis lyrata HOM05D005099 ORTHO05D006087 1.6e-39 166.8 189 52.9
THA.LOC104818909 Tarenaya hassleriana HOM05D005099 ORTHO05D006087 1.6e-39 166.8 209 51.7
Aqoxy2G02900 Aquilegia oxysepala HOM05D005099 ORTHO05D006087 2.7e-39 166.0 183 53.0
PSO407G0003 Papaver somniferum HOM05D005099 ORTHO05D006087 3.5e-39 165.6 198 52.0
ECA246G4673 Erigeron canadensis HOM05D005099 ORTHO05D006087 4.5e-39 165.2 197 55.3
Hund24882 Selenicereus undatus HOM05D005099 ORTHO05D006087 5.9e-39 164.9 187 50.8
Lsat_1_v5_gn_3_21720 Lactuca sativa HOM05D005099 ORTHO05D006087 1.3e-38 163.7 188 55.3
Gohir.D02G055600 Gossypium hirsutum HOM05D005099 ORTHO05D006087 1.7e-38 163.3 183 52.5
Gorai.005G061600 Gossypium raimondii HOM05D005099 ORTHO05D006087 1.7e-38 163.3 183 52.5
Gohir.A02G050700 Gossypium hirsutum HOM05D005099 ORTHO05D006087 2.3e-38 162.9 183 52.5
AT3G06840 Arabidopsis thaliana HOM05D005099 ORTHO05D006087 6.6e-38 161.4 190 51.1
Gohir.A09G237600 Gossypium hirsutum HOM05D005099 ORTHO05D006087 6.6e-38 161.4 209 52.6
Lj6g0002623 Lotus japonicus HOM05D005099 ORTHO05D006087 8.6e-38 161.0 185 51.9
MBI18_g04556_MAGBIO Magnolia biondii HOM05D005099 ORTHO05D006087 8.6e-38 161.0 182 52.2
PGR004G0666 Punica granatum HOM05D005099 ORTHO05D006087 1.5e-37 160.2 187 54.0
MD13G1165200 Malus domestica HOM05D005099 ORTHO05D006087 1.9e-37 159.8 197 52.3
Sc13g0003250 Simmondsia chinensis HOM05D005099 ORTHO05D006087 2.5e-37 159.5 182 52.7
Thhalv10004959m.g Eutrema salsugineum HOM05D005099 ORTHO05D006087 3.3e-37 159.1 207 52.7
Sp3g05800 Schrenkiella parvula HOM05D005099 ORTHO05D006087 5.6e-37 158.3 188 52.1
Migut.G00130 Erythranthe guttata HOM05D005099 ORTHO05D006087 2.1e-36 156.4 177 55.4
Aa31LG5G17420 Aethionema arabicum HOM05D005099 ORTHO05D006087 8.0e-36 154.5 185 50.3
Lalb_Chr20g0117371 Lupinus albus HOM05D005099 ORTHO05D006087 1.4e-35 153.7 185 48.6
Gohir.D09G238500 Gossypium hirsutum HOM05D005099 ORTHO05D006087 2.3e-35 152.9 196 53.1
HanXRQChr06g0173741 Helianthus annuus HOM05D005099 ORTHO05D006087 3.1e-35 152.5 179 53.1
Sp2g19520 Schrenkiella parvula HOM05D005099 ORTHO05D006087 8.9e-35 151.0 194 50.0
DCAR_002480 Daucus carota HOM05D005099 ORTHO05D006087 2.0e-34 149.8 194 51.0
Carub.0003s0637 Capsella rubella HOM05D005099 ORTHO05D006087 2.6e-34 149.4 188 50.0
BraA06t26768Z Brassica rapa HOM05D005099 ORTHO05D006087 3.4e-34 149.1 200 53.5
BcaC09g47923 Brassica carinata HOM05D005099 ORTHO05D006087 4.4e-34 148.7 189 48.1
BolC1t05583H Brassica oleracea HOM05D005099 ORTHO05D006087 4.4e-34 148.7 189 48.1
Thhalv10021591m.g Eutrema salsugineum HOM05D005099 ORTHO05D006087 5.8e-34 148.3 190 50.5
arahy.Tifrunner.gnm1.ann1.H54SCY Arachis hypogaea HOM05D005099 ORTHO05D006087 1.7e-33 146.7 181 50.8
arahy.Tifrunner.gnm1.ann1.L8YWMY Arachis hypogaea HOM05D005099 ORTHO05D006087 6.4e-33 144.8 181 50.3
BcaNung02585 Brassica carinata HOM05D005099 ORTHO05D006087 1.4e-32 143.7 220 48.6
BolC7t44497H Brassica oleracea HOM05D005099 ORTHO05D006087 1.4e-32 143.7 220 48.6
Gorai.006G261200 Gossypium raimondii HOM05D005099 ORTHO05D006087 1.4e-32 143.7 209 48.8
A02p37910 Brassica napus HOM05D005099 ORTHO05D006087 4.1e-32 142.1 195 51.8
BNapus_Darmor_BZH_scaffold_117p00120 Brassica napus HOM05D005099 ORTHO05D006087 9.2e-32 141.0 190 46.8
BraA01t04411Z Brassica rapa HOM05D005099 ORTHO05D006087 9.2e-32 141.0 190 46.8
BraA02t08775Z Brassica rapa HOM05D005099 ORTHO05D006087 1.2e-31 140.6 195 50.8
CARHR182490 Cardamine hirsuta HOM05D005099 ORTHO05D006087 2.7e-31 139.4 195 47.7
BcaC03g17704 Brassica carinata HOM05D005099 ORTHO05D006087 6.0e-31 138.3 195 50.8
C02p57110 Brassica napus HOM05D005099 ORTHO05D006087 6.0e-31 138.3 195 50.8
BolC2t11783H Brassica oleracea HOM05D005099 ORTHO05D006087 6.0e-31 138.3 195 50.8
Sed0015120 Sechium edule HOM05D005099 ORTHO05D006087 6.0e-31 138.3 180 50.0
C07p39730 Brassica napus HOM05D005099 ORTHO05D006087 7.8e-31 137.9 209 47.8
PSO170G0513 Papaver somniferum HOM05D005099 ORTHO05D006087 1.3e-30 137.1 198 46.5
A06p38540 Brassica napus HOM05D005099 ORTHO05D006087 1.7e-30 136.7 223 47.1
AT5G49170 Arabidopsis thaliana HOM05D005099 ORTHO05D006087 3.0e-30 136.0 200 47.0
BcaB07g34138 Brassica carinata HOM05D005099 ORTHO05D006087 3.0e-30 136.0 179 50.8
BcaC06g30711 Brassica carinata HOM05D005099 ORTHO05D006087 6.6e-30 134.8 225 47.1
AL8G22700 Arabidopsis lyrata HOM05D005099 ORTHO05D006087 7.3e-29 131.3 199 46.2
SHI00249 Sapria himalayana HOM05D005099 ORTHO05D006087 4.7e-28 128.6 186 44.1
Carub.0008s0899 Capsella rubella HOM05D005099 ORTHO05D006087 1.2e-26 124.0 204 44.1
Cpa.g.sc50.167 Carica papaya HOM05D005099 ORTHO05D006087 1.5e-26 123.6 122 58.2
ATR0693G064 Amborella trichopoda HOM05D005099 ORTHO05D006087 4.9e-25 118.6 176 43.8
Sc19g0005440 Simmondsia chinensis HOM05D005099 ORTHO05D006087 8.3e-25 117.9 177 44.6
Oeu035687.1 Olea europaea HOM05D005099 ORTHO05D006087 1.1e-24 117.5 194 40.7
HPP92_011860 Vanilla planifolia HOM05D005099 ORTHO05D006087 3.2e-24 115.9 168 44.0
Sopen05g032840 Solanum pennellii HOM05D005099 ORTHO05D006087 4.1e-24 115.5 180 42.8
Nitab4.5_0011001g0010 Nicotiana tabacum HOM05D005099 ORTHO05D006087 2.1e-23 113.2 184 40.8
DCAR_023299 Daucus carota HOM05D005099 ORTHO05D006087 1.0e-22 110.9 180 45.0
GSVIVG01035110001 Vitis vinifera HOM05D005099 ORTHO05D006087 4.3e-21 105.5 101 61.4
MD13G1165100 Malus domestica HOM05D005099 ORTHO05D006087 1.4e-19 100.5 151 47.0
Nn7g36563 Nelumbo nucifera HOM05D005099 ORTHO05D006087 7.5e-18 94.7 79 59.5
Lj6P680T81 Lonicera japonica HOM05D005099 ORTHO05D006087 2.9e-17 92.8 60 70.0
Nitab4.5_0001097g0130 Nicotiana tabacum HOM05D005099 ORTHO05D006087 1.2e-15 87.4 160 37.5
BcaC06g30713 Brassica carinata HOM05D005099 ORTHO05D006087 7.8e-15 84.7 94 53.2
Lalb_Chr15g0086051 Lupinus albus HOM05D005099 ORTHO05D006087 3.0e-14 82.8 84 53.6
arahy.Tifrunner.gnm1.ann1.8JA41T Arachis hypogaea HOM05D008031 ORTHO05D010063 6.6e-14 81.6 170 34.7
arahy.Tifrunner.gnm1.ann1.CKB8X1 Arachis hypogaea HOM05D008031 ORTHO05D010063 2.5e-13 79.7 170 34.1
arahy.Tifrunner.gnm1.ann1.PVL51W Arachis hypogaea HOM05D008031 ORTHO05D010063 3.3e-13 79.3 172 34.3
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 1.6e-12 77.0 151 37.7
Lalb_Chr10g0101091 Lupinus albus HOM05D008031 ORTHO05D010063 2.8e-12 76.3 182 29.7
MBI19_g32875_MAGBIO Magnolia biondii HOM05D008031 ORTHO05D010063 3.6e-12 75.9 180 33.9
Phvul.010G122700 Phaseolus vulgaris HOM05D008031 ORTHO05D010063 3.6e-12 75.9 179 34.6
Actinidia21841 Actinidia chinensis HOM05D008031 ORTHO05D010063 6.2e-12 75.1 175 34.3
VMungo0331G1222 Vigna mungo HOM05D008031 ORTHO05D010063 1.1e-11 74.3 179 35.2
Actinidia24421 Actinidia chinensis HOM05D001728 ORTHO05D004321 1.8e-11 73.6 182 34.6
Actinidia00002 Actinidia chinensis HOM05D005099 ORTHO05D006087 4.0e-11 72.4 40 80.0
Glyma.07G046300 Glycine max HOM05D008031 ORTHO05D010063 1.5e-10 70.5 180 35.0
Rhsim08G0245200 Rhododendron simsii HOM05D008031 ORTHO05D010063 7.6e-10 68.2 175 30.9
Aqoxy7G04192 Aquilegia oxysepala HOM05D008031 ORTHO05D010063 1.7e-09 67.0 178 31.5
Oeu019510.1 Olea europaea HOM05D008031 ORTHO05D010063 2.9e-09 66.2 176 31.2
CSS0025062 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004321 6.4e-09 65.1 178 32.6
Lj3g0013752 Lotus japonicus HOM05D008031 ORTHO05D010063 6.4e-09 65.1 178 31.5
unitig_88.g27793 Utricularia gibba HOM05D005099 ORTHO05D006087 1.1e-08 64.3 184 34.2
Atru.chr1.4165 Acer truncatum HOM05D008031 ORTHO05D010063 1.4e-08 63.9 179 31.8
Manes.04G151400 Manihot esculenta HOM05D008031 ORTHO05D010063 1.9e-08 63.5 182 30.2
Atru.chr1.4161 Acer truncatum HOM05D008031 ORTHO05D010063 3.2e-08 62.8 178 32.0
Cpa.g.sc25.199 Carica papaya HOM05D008031 ORTHO05D010063 1.2e-07 60.8 177 27.1
Potri.001G162100 Populus trichocarpa HOM05D008031 ORTHO05D010063 1.2e-07 60.8 178 30.3
CiPaw.02G130600 Carya illinoinensis HOM05D008031 ORTHO05D010063 2.7e-07 59.7 186 30.1
Thecc.06G130800 Theobroma cacao HOM05D008031 ORTHO05D010063 2.7e-07 59.7 179 30.7
Hma1.2p1_0090F.1_g045750 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 4.6e-07 58.9 182 31.3
Hma1.2p1_2628F.1_g325675 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 4.6e-07 58.9 182 31.3
Gohir.A10G048037 Gossypium hirsutum HOM05D001728 ORTHO05D004321 1.3e-06 57.4 169 32.5
Potri.003G073200 Populus trichocarpa HOM05D008031 ORTHO05D010063 1.7e-06 57.0 176 31.2
Ah.08g217400 Amaranthus hybridus HOM05D008031 ORTHO05D010063 2.3e-06 56.6 165 32.7
PGR102G3014 Punica granatum HOM05D008031 ORTHO05D010063 2.3e-06 56.6 182 29.1
Eucgr.I02164 Eucalyptus grandis HOM05D008031 ORTHO05D010063 3.0e-06 56.2 169 30.2


User provided reference genes

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