Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006410.1 Olea europaea HOM05D007614 ORTHO05D009538 0.0e+00 2729.5 1431 100.0
SalBow2G0719 Salvia bowleyana HOM05D007614 ORTHO05D009538 0.0e+00 1678.7 1429 64.3
SGA_v2.0_scaffold67G22611 Striga asiatica HOM05D007614 ORTHO05D009538 0.0e+00 1587.4 1456 61.3
Dinv29737 Davidia involucrata HOM05D007614 ORTHO05D009538 0.0e+00 1551.2 1414 60.3
Peaxi162Scf00065g01533 Petunia axillaris HOM05D007614 ORTHO05D009538 0.0e+00 1510.7 1456 58.4
CSS0029892 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 0.0e+00 1501.9 1437 59.5
Cc03_g01650 Coffea canephora HOM05D007614 ORTHO05D009538 0.0e+00 1500.7 1439 59.1
Nitab4.5_0002628g0040 Nicotiana tabacum HOM05D007614 ORTHO05D009538 0.0e+00 1495.3 1451 58.7
CSS0000522 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 0.0e+00 1475.7 1437 58.8
TAR365G0799 Trochodendron aralioides HOM05D007614 ORTHO05D009538 0.0e+00 1471.4 1429 57.9
QL06p010082 Quercus lobata HOM05D007614 ORTHO05D009538 0.0e+00 1437.6 1417 56.7
Sopen01g028150 Solanum pennellii HOM05D007614 ORTHO05D009538 0.0e+00 1424.8 1383 57.6
Solyc01g066610.4 Solanum lycopersicum HOM05D007614 ORTHO05D009538 0.0e+00 1419.8 1383 57.6
Nitab4.5_0000513g0110 Nicotiana tabacum HOM05D007614 ORTHO05D009538 0.0e+00 1410.2 1451 55.5
Haze_01174 Corylus avellana HOM05D007614 ORTHO05D009538 0.0e+00 1383.2 1420 55.1
MD13G1166500 Malus domestica HOM05D007614 ORTHO05D009538 0.0e+00 1354.0 1420 53.2
RcHm_v2.0_Chr4g0423071 Rosa chinensis HOM05D007614 ORTHO05D009538 0.0e+00 1350.5 1422 53.4
GSVIVG01035126001 Vitis vinifera HOM05D007614 ORTHO05D009538 0.0e+00 1344.7 1279 58.3
Atru.chr6.1993 Acer truncatum HOM05D007614 ORTHO05D009538 0.0e+00 1334.7 1428 53.9
Lj3C822G9 Lonicera japonica HOM05D007614 ORTHO05D009538 0.0e+00 1333.9 1230 60.7
Ciclev10004153m.g Citrus clementina HOM05D007614 ORTHO05D009538 0.0e+00 1327.4 1389 54.3
Duzib151G0258 Durio zibethinus HOM05D007614 ORTHO05D009538 0.0e+00 1319.7 1415 53.4
FAN07G2176 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1315.4 1434 52.1
TWI73G0642 Tripterygium wilfordii HOM05D007614 ORTHO05D009538 0.0e+00 1308.5 1434 52.9
Nn3g21526 Nelumbo nucifera HOM05D007614 ORTHO05D009538 0.0e+00 1307.7 1421 52.1
Potri.010G011800 Populus trichocarpa HOM05D007614 ORTHO05D009538 0.0e+00 1304.7 1431 52.0
MBI19_g34788_MAGBIO Magnolia biondii HOM05D007614 ORTHO05D009538 0.0e+00 1303.5 1458 51.5
Cfa015415 Carpinus fangiana HOM05D007614 ORTHO05D009538 0.0e+00 1298.1 1252 57.0
CiPaw.02G080700 Carya illinoinensis HOM05D007614 ORTHO05D009538 0.0e+00 1291.9 1242 56.4
CANSAT78G1530 Cannabis sativa HOM05D007614 ORTHO05D009538 0.0e+00 1288.1 1420 52.3
Gorai.006G076700 Gossypium raimondii HOM05D007614 ORTHO05D009538 0.0e+00 1280.4 1414 51.8
FAN12G3001 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1278.8 1439 51.2
FAN12G0400 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1275.8 1426 51.5
Aqoxy2G02920 Aquilegia oxysepala HOM05D007614 ORTHO05D009538 0.0e+00 1275.0 1440 50.1
PGSC0003DMG400011332 Solanum tuberosum HOM05D007614 ORTHO05D009538 0.0e+00 1275.0 1253 56.6
Sabra10G0007500 Salix brachista HOM05D007614 ORTHO05D009538 0.0e+00 1268.8 1428 51.0
COL.COLO4_37910 Corchorus olitorius HOM05D007614 ORTHO05D009538 0.0e+00 1251.5 1414 51.4
Sc13g0003320 Simmondsia chinensis HOM05D007614 ORTHO05D009538 0.0e+00 1246.9 1424 49.7
PSO407G0339 Papaver somniferum HOM05D007614 ORTHO05D009538 0.0e+00 1244.6 1433 50.6
FAN17G0278 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1204.9 1234 54.0
FvH4_4g18510 Fragaria vesca HOM05D007614 ORTHO05D009538 0.0e+00 1196.0 1234 53.7
PGR031G0733 Punica granatum HOM05D007614 ORTHO05D009538 0.0e+00 1186.4 1418 48.9
Lsat_1_v5_gn_6_96381 Lactuca sativa HOM05D007614 ORTHO05D009538 0.0e+00 1184.1 1422 50.1
AL8G22620 Arabidopsis lyrata HOM05D007614 ORTHO05D009538 0.0e+00 1176.8 1349 49.3
THA.LOC104827336 Tarenaya hassleriana HOM05D007614 ORTHO05D009538 0.0e+00 1165.6 1425 47.2
AT5G49110 Arabidopsis thaliana HOM05D007614 ORTHO05D009538 0.0e+00 1164.8 1340 48.8
Thhalv10003518m.g Eutrema salsugineum HOM05D007614 ORTHO05D009538 0.0e+00 1160.2 1402 47.9
CARHR182630 Cardamine hirsuta HOM05D007614 ORTHO05D009538 0.0e+00 1151.3 1419 47.8
BcaB07g34217 Brassica carinata HOM05D007614 ORTHO05D009538 0.0e+00 1147.5 1374 48.4
A02p37890 Brassica napus HOM05D007614 ORTHO05D009538 0.0e+00 1146.0 1431 47.0
BraA02t08773Z Brassica rapa HOM05D007614 ORTHO05D009538 0.0e+00 1140.9 1354 48.5
ECA240G3304 Erigeron canadensis HOM05D007614 ORTHO05D009538 0.0e+00 1135.2 1180 54.7
DCAR_027058 Daucus carota HOM05D007614 ORTHO05D009538 0.0e+00 1133.2 1198 54.8
C02p57050 Brassica napus HOM05D007614 ORTHO05D009538 0.0e+00 1127.9 1373 47.6
BolC2t11775H Brassica oleracea HOM05D007614 ORTHO05D009538 0.0e+00 1125.9 1403 47.1
Prupe.1G132900 Prunus persica HOM05D007614 ORTHO05D009538 3.6e-304 1048.9 1097 53.4
BcaC03g17700 Brassica carinata HOM05D007614 ORTHO05D009538 2.1e-296 1023.1 1403 44.5
Manes.03G197500 Manihot esculenta HOM05D007614 ORTHO05D009538 3.5e-291 1005.7 1146 50.3
Thecc.04G287600 Theobroma cacao HOM05D007614 ORTHO05D009538 2.5e-289 999.6 1036 54.5
ATR0796G125 Amborella trichopoda HOM05D007614 ORTHO05D009538 5.3e-284 981.9 1430 43.1
Hma1.2p1_1807F.1_g303400 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 3.5e-275 952.6 872 61.4
Eucgr.B01588 Eucalyptus grandis HOM05D007614 ORTHO05D009538 4.5e-275 952.2 1143 49.6
Migut.G00138 Erythranthe guttata HOM05D007614 ORTHO05D009538 2.1e-272 943.3 719 70.2
SEGI_15090 Sequoiadendron giganteum HOM05D007614 ORTHO05D009538 1.2e-270 937.6 1365 41.6
Cpa.g.sc16.197 Carica papaya HOM05D007614 ORTHO05D009538 7.5e-270 934.9 1042 51.2
HPP92_013726 Vanilla planifolia HOM05D007614 ORTHO05D009538 6.6e-266 921.8 1404 41.7
Gohir.A09G063000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 4.3e-265 919.1 1039 50.4
Gohir.D09G062000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 2.3e-263 913.3 1035 50.7
Hma1.2p1_0804F.1_g220930 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 9.8e-262 907.9 858 59.7
Zm00001eb016350 Zea mays HOM05D007614 ORTHO05D009538 7.1e-220 768.8 1289 38.7
CAN.G421.11 Capsicum annuum HOM05D007614 ORTHO05D009538 1.0e-218 765.0 904 49.7
CDE01G0153 Ceratophyllum demersum HOM05D007614 ORTHO05D009538 5.3e-215 752.7 1442 36.5
Actinidia00005 Actinidia chinensis HOM05D007614 ORTHO05D009538 4.1e-199 699.9 719 55.5
BcaC03g17696 Brassica carinata HOM05D007614 ORTHO05D009538 6.7e-194 682.6 1012 44.0
HanXRQChr03g0089461 Helianthus annuus HOM05D007614 ORTHO05D009538 3.0e-186 657.1 639 59.3
Pp3c13_17960 Physcomitrium patens HOM05D007614 ORTHO05D009538 1.3e-184 651.7 1369 33.7
AagrBONN_evm.TU.Sc2ySwM_344.1704 Anthoceros agrestis HOM05D007614 ORTHO05D009538 1.3e-181 641.7 1397 34.3
AagrBONN_evm.TU.Sc2ySwM_344.1702 Anthoceros agrestis HOM05D007614 ORTHO05D009538 1.2e-179 635.2 1364 34.4
Mapoly0051s0073 Marchantia polymorpha HOM05D007614 ORTHO05D009538 1.8e-175 621.3 1445 33.6
Migut.G00137 Erythranthe guttata HOM05D007614 ORTHO05D009538 7.0e-159 566.2 671 52.2
MSTRG.3900 Avicennia marina HOM05D007614 ORTHO05D009538 4.3e-148 530.4 469 62.5
CBR_g12376 Chara braunii HOM05D007614 ORTHO05D009538 9.3e-103 379.8 1314 28.1
HanXRQChr03g0089481 Helianthus annuus HOM05D007614 ORTHO05D009538 2.5e-84 318.5 291 59.8
BcaC03g17697 Brassica carinata HOM05D007614 ORTHO05D009538 5.9e-81 307.4 373 47.7
BcaB01g01537 Brassica carinata HOM05D007614 ORTHO05D009538 2.8e-75 288.5 355 49.3
Cpa.g.c41899 Carica papaya HOM05D007614 ORTHO05D009538 2.5e-71 275.4 269 58.0
CAN.G421.12 Capsicum annuum HOM05D007614 ORTHO05D009538 5.7e-68 264.2 270 57.8
Cc01_g15100 Coffea canephora HOM05D007614 ORTHO05D009538 2.6e-52 212.2 269 48.0
Eucgr.B01587 Eucalyptus grandis HOM05D007614 ORTHO05D009538 7.0e-42 177.6 203 51.2
HanXRQChr03g0089471 Helianthus annuus HOM05D007614 ORTHO05D009538 4.4e-36 158.3 283 39.2
Actinidia14288 Actinidia chinensis HOM05D007614 ORTHO05D009538 4.1e-34 151.8 120 70.8
Actinidia27756 Actinidia chinensis HOM05D007614 ORTHO05D009538 1.4e-29 136.7 104 73.1
BcaB04g20478 Brassica carinata HOM05D007614 ORTHO05D009538 3.9e-24 118.6 104 56.7
Os03g0341200 Oryza sativa ssp. japonica HOM05D007614 ORTHO05D009538 1.7e-19 103.2 158 46.8
Actinidia14287 Actinidia chinensis HOM05D065619 ORTHO05D037991 7.6e-12 77.8 87 52.9
Zm00001eb167500 Zea mays HOM05D000563 ORTHO05D009538 6.0e-09 68.2 70 52.9
Cre07.g314700 Chlamydomonas reinhardtii HOM05D058327 ORTHO05D009538 3.6e-06 58.9 334 24.3


User provided reference genes

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