Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 1.1e-46 189.5 91 100.0
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 3.4e-35 151.4 85 81.2
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 3.8e-34 147.9 85 80.0
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 3.8e-34 147.9 85 81.2
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 1.1e-33 146.4 86 80.2
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 1.4e-33 146.0 85 80.0
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 9.3e-33 143.3 85 74.1
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 1.6e-32 142.5 85 80.0
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 2.7e-32 141.7 85 76.5
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 2.7e-32 141.7 85 76.5
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 4.6e-32 141.0 85 75.3
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 6.0e-32 140.6 85 75.3
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 6.0e-32 140.6 85 75.3
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 6.0e-32 140.6 85 75.3
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 7.9e-32 140.2 90 75.6
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 3.9e-31 137.9 85 76.5
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 3.9e-31 137.9 85 76.5
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 3.9e-31 137.9 85 78.8
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 8.7e-31 136.7 85 75.3
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 8.7e-31 136.7 85 75.3
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.9e-30 135.6 85 77.6
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 2.5e-30 135.2 91 72.5
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 2.5e-30 135.2 85 76.5
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 5.6e-30 134.0 85 76.5
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 5.6e-30 134.0 85 72.9
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.3e-29 132.9 85 77.6
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 1.3e-29 132.9 85 72.9
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 1.6e-29 132.5 88 71.6
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 1.6e-29 132.5 89 73.0
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 2.1e-29 132.1 85 72.9
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 2.8e-29 131.7 85 74.1
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 3.7e-29 131.3 86 74.4
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 3.7e-29 131.3 85 77.6
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 3.7e-29 131.3 85 75.3
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 4.8e-29 131.0 85 71.8
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 4.8e-29 131.0 85 74.1
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 6.2e-29 130.6 85 71.8
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 8.2e-29 130.2 85 70.6
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.1e-28 129.8 87 70.1
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 1.1e-28 129.8 93 67.7
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 1.4e-28 129.4 86 73.3
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 1.8e-28 129.0 86 73.3
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 2.4e-28 128.6 93 68.8
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 2.4e-28 128.6 86 72.1
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 2.4e-28 128.6 85 72.9
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 2.4e-28 128.6 85 72.9
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 3.1e-28 128.3 85 74.1
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 4.0e-28 127.9 89 70.8
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 5.3e-28 127.5 85 69.4
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 1.2e-27 126.3 85 71.8
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 1.5e-27 125.9 85 71.8
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 1.5e-27 125.9 85 70.6
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 1.5e-27 125.9 85 70.6
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 2.0e-27 125.6 85 70.6
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 2.0e-27 125.6 88 69.3
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 2.6e-27 125.2 86 69.8
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 3.4e-27 124.8 87 71.3
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 3.4e-27 124.8 85 69.4
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 3.4e-27 124.8 85 74.1
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 4.5e-27 124.4 85 69.4
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 5.8e-27 124.0 87 71.3
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 7.6e-27 123.6 85 69.4
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 1.0e-26 123.2 87 71.3
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.0e-26 123.2 99 66.7
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 1.3e-26 122.9 87 70.1
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 1.7e-26 122.5 85 67.1
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 1.7e-26 122.5 85 72.9
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 1.7e-26 122.5 86 69.8
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 2.2e-26 122.1 85 69.4
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 2.2e-26 122.1 93 65.6
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 4.9e-26 120.9 85 65.9
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 6.5e-26 120.6 85 65.9
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 8.4e-26 120.2 85 68.2
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 8.4e-26 120.2 85 67.1
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 8.4e-26 120.2 85 65.9
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 2.5e-25 118.6 64 82.8
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 2.5e-25 118.6 86 68.6
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 2.5e-25 118.6 85 62.4
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 3.2e-25 118.2 85 67.1
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 9.3e-25 116.7 85 67.1
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 1.6e-24 115.9 83 63.9
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 4.6e-24 114.4 89 62.9
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 4.3e-22 107.8 67 77.6
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 4.8e-21 104.4 72 72.2
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 8.2e-21 103.6 86 55.8
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 1.1e-20 103.2 84 61.9
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 1.4e-20 102.8 142 42.3
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 1.8e-20 102.4 86 57.0
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 1.2e-19 99.8 67 70.1
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 2.0e-19 99.0 85 55.3
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 2.6e-19 98.6 89 52.8
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 2.6e-19 98.6 89 53.9
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 3.4e-19 98.2 87 54.0
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 3.8e-18 94.7 93 49.5
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 1.1e-17 93.2 86 53.5
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 2.7e-16 88.6 92 47.8
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 1.8e-15 85.9 85 52.9
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 3.0e-15 85.1 45 82.2
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 1.3e-13 79.7 55 61.8
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 1.2e-11 73.2 45 64.4
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 3.9e-07 58.2 46 63.0
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 1.1e-06 56.6 50 62.0


User provided reference genes

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