Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 7.5e-80 300.4 150 100.0
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 3.6e-74 281.6 152 95.4
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 4.9e-63 244.6 152 82.9
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 8.3e-63 243.8 148 83.8
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 2.4e-62 242.3 153 83.0
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 2.4e-62 242.3 152 82.2
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 3.2e-62 241.9 152 82.2
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 3.5e-61 238.4 152 81.6
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.3e-59 231.9 151 80.8
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 4.3e-59 231.5 151 80.8
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 7.3e-59 230.7 149 79.2
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.1e-58 229.2 151 79.5
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 1.5e-56 223.0 149 79.9
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 2.2e-55 219.2 151 78.8
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 1.1e-54 216.9 141 80.1
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 1.4e-54 216.5 152 77.6
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 1.9e-54 216.1 155 77.4
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 1.9e-54 216.1 158 75.9
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 1.9e-54 216.1 158 75.9
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 3.2e-54 215.3 151 76.2
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 9.2e-54 213.8 151 76.2
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 2.1e-53 212.6 171 70.2
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 7.8e-53 210.7 157 71.3
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 1.0e-52 210.3 153 75.2
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 3.9e-52 208.4 152 71.7
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 3.9e-52 208.4 152 71.7
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 3.9e-52 208.4 144 77.1
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 8.6e-52 207.2 152 71.7
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 1.1e-51 206.8 154 72.1
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 1.1e-51 206.8 141 76.6
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 1.1e-51 206.8 141 76.6
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 1.1e-51 206.8 141 76.6
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 1.5e-51 206.5 145 77.9
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 1.9e-51 206.1 167 69.5
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.9e-51 206.1 166 69.3
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 1.9e-51 206.1 143 77.6
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 2.5e-51 205.7 141 76.6
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 3.3e-51 205.3 144 75.0
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 4.3e-51 204.9 142 76.8
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 4.3e-51 204.9 167 68.9
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 5.6e-51 204.5 141 75.9
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 7.3e-51 204.1 141 75.2
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 7.3e-51 204.1 141 75.2
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 9.6e-51 203.8 154 74.7
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 1.6e-50 203.0 159 68.6
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 1.6e-50 203.0 159 68.6
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 1.6e-50 203.0 159 68.6
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 1.6e-50 203.0 145 74.5
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 1.6e-50 203.0 162 70.4
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 2.1e-50 202.6 141 73.8
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 2.1e-50 202.6 141 73.8
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 2.1e-50 202.6 141 73.8
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.1e-50 202.6 169 68.0
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 2.1e-50 202.6 154 68.8
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 2.8e-50 202.2 140 79.3
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 2.8e-50 202.2 145 74.5
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 2.8e-50 202.2 142 75.4
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 3.6e-50 201.8 141 73.8
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 3.6e-50 201.8 141 73.8
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 3.6e-50 201.8 141 75.2
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 3.6e-50 201.8 144 74.3
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 3.6e-50 201.8 140 75.7
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 4.7e-50 201.4 141 74.5
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 4.7e-50 201.4 141 74.5
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 4.7e-50 201.4 144 74.3
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 6.2e-50 201.1 144 72.2
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 6.2e-50 201.1 145 74.5
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 6.2e-50 201.1 138 76.1
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 8.1e-50 200.7 141 73.0
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 8.1e-50 200.7 144 72.2
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 8.1e-50 200.7 138 75.4
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 8.1e-50 200.7 138 75.4
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.1e-49 200.3 144 71.5
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 1.1e-49 200.3 138 76.8
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 1.4e-49 199.9 147 76.2
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 1.4e-49 199.9 157 71.3
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 1.8e-49 199.5 139 74.8
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 1.8e-49 199.5 141 73.8
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 1.8e-49 199.5 142 73.9
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 1.8e-49 199.5 161 69.6
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.8e-49 199.5 144 72.2
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 1.8e-49 199.5 161 69.6
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 4.0e-49 198.4 169 68.6
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 4.0e-49 198.4 139 74.1
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 6.9e-49 197.6 145 73.1
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 6.9e-49 197.6 142 73.2
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 6.9e-49 197.6 158 68.4
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 6.9e-49 197.6 107 89.7
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 9.0e-49 197.2 110 88.2
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 9.0e-49 197.2 143 72.7
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 1.2e-48 196.8 106 90.6
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.2e-48 196.8 142 74.6
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.5e-48 196.4 171 65.5
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 1.5e-48 196.4 149 70.5
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 1.5e-48 196.4 161 68.9
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 1.5e-48 196.4 161 68.9
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.5e-48 196.4 145 74.5
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 3.4e-48 195.3 157 68.2
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 3.4e-48 195.3 158 69.0
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 3.4e-48 195.3 169 65.1
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 4.4e-48 194.9 145 69.7
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 5.8e-48 194.5 100 93.0
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 5.8e-48 194.5 104 89.4
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 5.8e-48 194.5 142 73.2
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 8.4e-47 190.7 145 72.4
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 1.1e-46 190.3 145 72.4
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 1.9e-46 189.5 143 69.9
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 2.4e-46 189.1 148 66.9
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 5.4e-46 188.0 114 83.3
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 1.6e-45 186.4 111 82.0
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 2.7e-45 185.7 147 66.0
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 4.3e-43 178.3 100 84.0
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 9.6e-43 177.2 134 68.7
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 6.2e-42 174.5 156 66.7
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 1.4e-33 146.7 142 59.9
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 5.3e-33 144.8 97 71.1
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 3.4e-32 142.1 147 54.4
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 2.9e-31 139.0 139 51.8
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 1.9e-30 136.3 114 61.4
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 3.5e-29 132.1 111 60.4
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 1.3e-28 130.2 97 61.9
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 3.9e-28 128.6 142 55.6
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.4e-25 120.2 122 57.4
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 1.2e-24 117.1 72 79.2
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 2.2e-18 96.3 52 88.5
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 4.8e-18 95.1 50 90.0
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 4.8e-18 95.1 50 90.0
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 1.1e-17 94.0 90 52.2
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 1.5e-16 90.1 125 45.6
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 3.3e-11 72.4 121 34.7


User provided reference genes

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