Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006261.2 Olea europaea HOM05D003079 ORTHO05D003461 2.1e-239 832.0 442 100.0
Oeu052884.2 Olea europaea HOM05D003079 ORTHO05D003461 2.0e-48 197.6 339 44.2
MSTRG.13045 Avicennia marina HOM05D003079 ORTHO05D003461 6.1e-37 159.5 429 34.3
Peaxi162Scf00232g00614 Petunia axillaris HOM05D003079 ORTHO05D003461 6.1e-37 159.5 320 39.1
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 6.3e-34 149.4 283 39.2
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 4.1e-33 146.7 167 50.9
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.3e-31 141.7 331 36.3
Nitab4.5_0000611g0170 Nicotiana tabacum HOM05D003079 ORTHO05D003461 2.2e-31 141.0 281 36.7
Solyc07g066170.4 Solanum lycopersicum HOM05D003079 ORTHO05D003461 5.0e-31 139.8 315 34.9
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 5.0e-31 139.8 298 35.9
MSTRG.16132 Avicennia marina HOM05D003079 ORTHO05D003461 3.2e-30 137.1 298 38.6
CAN.G623.75 Capsicum annuum HOM05D003079 ORTHO05D003461 3.2e-30 137.1 305 35.4
Oeu005543.1 Olea europaea HOM05D003079 ORTHO05D003461 5.5e-30 136.3 474 31.6
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 7.2e-30 136.0 537 29.2
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 2.3e-28 131.0 297 34.7
Nitab4.5_0001622g0150 Nicotiana tabacum HOM05D003079 ORTHO05D003461 8.8e-28 129.0 344 31.1
Oeu052026.1 Olea europaea HOM05D003079 ORTHO05D003461 8.8e-28 129.0 425 32.7
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 2.6e-27 127.5 301 37.5
PGSC0003DMG400008693 Solanum tuberosum HOM05D003079 ORTHO05D003461 5.7e-27 126.3 299 33.8
SGA_v2.0_scaffold186G40233 Striga asiatica HOM05D003079 ORTHO05D003461 9.8e-27 125.6 302 34.4
Nitab4.5_0003570g0050 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.7e-26 124.8 279 36.6
Sopen10g001680 Solanum pennellii HOM05D003079 ORTHO05D003461 1.7e-26 124.8 294 33.3
Nitab4.5_0002216g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 2.8e-26 124.0 127 57.5
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 1.4e-25 121.7 288 33.3
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 2.4e-25 120.9 304 32.6
Migut.M01581 Erythranthe guttata HOM05D003079 ORTHO05D003461 2.0e-24 117.9 374 32.4
SGA_v2.0_scaffold92G28159 Striga asiatica HOM05D003079 ORTHO05D003461 5.9e-24 116.3 182 46.2
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 7.7e-24 115.9 282 35.1
SGA_v2.0_scaffold7G03549 Striga asiatica HOM05D003079 ORTHO05D003461 7.7e-24 115.9 308 32.5
MSTRG.14525 Avicennia marina HOM05D003079 ORTHO05D003461 1.7e-23 114.8 298 32.9
SalBow8G1693 Salvia bowleyana HOM05D003079 ORTHO05D003461 2.9e-23 114.0 367 30.5
Oeu015272.1 Olea europaea HOM05D003079 ORTHO05D003461 5.0e-23 113.2 139 47.5
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 1.1e-22 112.1 280 31.8
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 1.5e-22 111.7 434 28.8
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 2.5e-22 110.9 273 33.3
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 7.2e-22 109.4 325 31.1
Peaxi162Scf00006g00810 Petunia axillaris HOM05D003079 ORTHO05D003461 1.6e-21 108.2 242 35.1
Hma1.2p1_0193F.1_g084340 Hydrangea macrophylla HOM05D003079 ORTHO05D003461 2.7e-21 107.5 478 28.5
Sc03g0011780 Simmondsia chinensis HOM05D003079 ORTHO05D003461 3.6e-21 107.1 326 29.1
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 1.4e-20 105.1 127 48.0
Migut.H01709 Erythranthe guttata HOM05D003079 ORTHO05D003461 1.4e-20 105.1 431 28.3
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 1.8e-20 104.8 306 30.1
MBI15_g44396_MAGBIO Magnolia biondii HOM05D003079 ORTHO05D003461 2.3e-20 104.4 280 31.1
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 3.0e-20 104.0 317 30.9
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 3.0e-20 104.0 293 31.7
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 5.2e-20 103.2 332 30.4
CSS0022300 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 2.0e-19 101.3 384 30.2
CSS0035812 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 2.6e-19 100.9 384 30.2
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 5.7e-19 99.8 304 28.9
Medtr3g009740 Medicago truncatula HOM05D003079 ORTHO05D003461 1.3e-18 98.6 304 29.9
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 1.3e-18 98.6 291 30.2
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 1.7e-18 98.2 319 28.8
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 2.8e-18 97.4 286 30.8
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 3.7e-18 97.1 351 26.8
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 8.3e-18 95.9 279 29.0
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.4e-17 95.1 280 30.4
Lalb_Chr04g0259441 Lupinus albus HOM05D003079 ORTHO05D003461 1.8e-17 94.7 308 31.8
Dinv40917 Davidia involucrata HOM05D003079 ORTHO05D003461 3.1e-17 94.0 402 27.9
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 3.1e-17 94.0 301 28.9
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 5.4e-17 93.2 316 29.1
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 7.0e-17 92.8 287 30.7
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 9.1e-17 92.4 331 27.8
PGSC0003DMG400022146 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.2e-16 92.0 303 30.0
Dinv19642 Davidia involucrata HOM05D003079 ORTHO05D003461 2.7e-16 90.9 123 47.2
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 2.7e-16 90.9 280 29.6
Psat5g231200 Pisum sativum HOM05D003079 ORTHO05D003461 5.9e-16 89.7 324 27.8
CiPaw.12G142800 Carya illinoinensis HOM05D003079 ORTHO05D003461 1.0e-15 89.0 368 29.6
vmacro09798 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 1.7e-15 88.2 141 39.0
CiPaw.12G142700 Carya illinoinensis HOM05D003079 ORTHO05D003461 2.3e-15 87.8 340 29.4
DCAR_013756 Daucus carota HOM05D003079 ORTHO05D003461 2.9e-15 87.4 275 32.4
MD11G1046100 Malus domestica HOM05D003079 ORTHO05D003461 8.6e-15 85.9 420 28.1
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 1.1e-14 85.5 127 40.2
arahy.Tifrunner.gnm1.ann1.WAW8B8 Arachis hypogaea HOM05D003079 ORTHO05D003461 1.5e-14 85.1 320 29.4
Lj1A901G36 Lonicera japonica HOM05D003079 ORTHO05D003461 1.9e-14 84.7 435 26.4
PGR083G0768 Punica granatum HOM05D003079 ORTHO05D003461 1.9e-14 84.7 281 29.5
arahy.Tifrunner.gnm1.ann1.FC0SK2 Arachis hypogaea HOM05D003079 ORTHO05D003461 5.6e-14 83.2 319 29.2
FAN25G3298 Fragaria x ananassa HOM05D003079 ORTHO05D003461 7.2e-14 82.8 129 41.1
TPR.G16690 Trifolium pratense HOM05D003079 ORTHO05D003461 7.2e-14 82.8 305 27.9
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 9.5e-14 82.4 127 40.9
Lj3g0020124 Lotus japonicus HOM05D003079 ORTHO05D003461 9.5e-14 82.4 331 26.9
Aqoxy7G02327 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 1.2e-13 82.0 127 39.4
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.2e-13 82.0 127 39.4
Actinidia30351 Actinidia chinensis HOM05D003079 ORTHO05D003461 3.6e-13 80.5 100 49.0
CiPaw.12G142900 Carya illinoinensis HOM05D003079 ORTHO05D003461 3.6e-13 80.5 272 31.6
Prupe.6G035500 Prunus persica HOM05D003079 ORTHO05D003461 3.6e-13 80.5 127 41.7
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 4.7e-13 80.1 127 40.2
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 4.7e-13 80.1 127 40.2
Rhsim06G0235200 Rhododendron simsii HOM05D003079 ORTHO05D003461 6.1e-13 79.7 324 28.7
TAR611G0001 Trochodendron aralioides HOM05D003079 ORTHO05D003461 1.0e-12 79.0 116 39.7
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 1.4e-12 78.6 335 29.9
AUR62043120 Chenopodium quinoa HOM05D003079 ORTHO05D003461 1.4e-12 78.6 280 27.9
COL.COLO4_07790 Corchorus olitorius HOM05D003079 ORTHO05D003461 1.4e-12 78.6 96 44.8
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.8e-12 78.2 277 30.7
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.8e-12 78.2 277 30.7
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 2.3e-12 77.8 275 28.7
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 2.3e-12 77.8 292 28.1
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 3.0e-12 77.4 314 28.0
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 4.0e-12 77.0 280 29.6
DCAR_017612 Daucus carota HOM05D003079 ORTHO05D003461 5.2e-12 76.6 127 38.6
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 6.8e-12 76.3 311 25.7
TAR626G1036 Trochodendron aralioides HOM05D003079 ORTHO05D003461 8.9e-12 75.9 127 37.0
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 3.4e-11 73.9 279 29.0
Actinidia03676 Actinidia chinensis HOM05D003079 ORTHO05D003461 4.4e-11 73.6 116 42.2
ATR0751G103 Amborella trichopoda HOM05D003079 ORTHO05D003461 4.4e-11 73.6 127 38.6
Rhsim04G0008000 Rhododendron simsii HOM05D003079 ORTHO05D003461 4.9e-10 70.1 114 38.6
Oeu062673.1 Olea europaea HOM05D003079 ORTHO05D003461 6.4e-10 69.7 180 37.2
Thhalv10024990m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 1.1e-09 68.9 372 27.4
BraA01t01726Z Brassica rapa HOM05D003079 ORTHO05D003461 1.4e-09 68.6 150 38.0
Carub.0007s1447 Capsella rubella HOM05D003079 ORTHO05D003461 1.4e-09 68.6 180 31.7
PGSC0003DMG400029886 Solanum tuberosum HOM05D003079 ORTHO05D003461 4.1e-09 67.0 78 43.6
BcaC09g50710 Brassica carinata HOM05D003079 ORTHO05D003461 5.4e-09 66.6 129 39.5
C01p22370 Brassica napus HOM05D003079 ORTHO05D003461 5.4e-09 66.6 129 39.5
BolC1t02168H Brassica oleracea HOM05D003079 ORTHO05D003461 5.4e-09 66.6 129 39.5
A01p17700 Brassica napus HOM05D003079 ORTHO05D003461 7.0e-09 66.2 150 37.3
Sp7g24370 Schrenkiella parvula HOM05D003079 ORTHO05D003461 2.0e-08 64.7 150 36.7
PGSC0003DMG400028881 Solanum tuberosum HOM05D003079 ORTHO05D003461 2.0e-08 64.7 67 55.2
Lalb_Chr15g0079931 Lupinus albus HOM05D003079 ORTHO05D003461 2.7e-08 64.3 371 25.6
Haze_09917 Corylus avellana HOM05D003079 ORTHO05D003461 3.5e-08 63.9 258 29.1
AT4G26455 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 4.6e-08 63.5 180 31.1
CARHR234020 Cardamine hirsuta HOM05D003079 ORTHO05D003461 4.6e-08 63.5 128 39.1
Medtr8g070940 Medicago truncatula HOM05D003079 ORTHO05D003461 4.6e-08 63.5 158 31.0
Sed0005838 Sechium edule HOM05D003079 ORTHO05D003461 5.9e-08 63.2 128 34.4
Lalb_Chr18g0048661 Lupinus albus HOM05D003079 ORTHO05D003461 1.3e-07 62.0 130 33.1
Os09g0481300 Oryza sativa ssp. japonica HOM05D003079 ORTHO05D003461 1.3e-07 62.0 280 25.0
HPP92_007490 Vanilla planifolia HOM05D003079 ORTHO05D003461 1.3e-07 62.0 127 31.5
Thhalv10013313m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 2.3e-07 61.2 297 30.6
AL7G26490 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 3.0e-07 60.8 131 36.6
Atru.chr2.3897 Acer truncatum HOM05D003079 ORTHO05D003461 5.0e-07 60.1 281 27.0
Aa31LG3G12120 Aethionema arabicum HOM05D003079 ORTHO05D003461 6.6e-07 59.7 277 26.7
Aqoxy4G02267 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 6.6e-07 59.7 407 23.8
EL10Ac4g08434 Beta vulgaris HOM05D003079 ORTHO05D003461 8.6e-07 59.3 272 25.0
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 8.6e-07 59.3 361 26.3
THA.LOC104811703 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 1.1e-06 58.9 127 33.9
Zm00001eb079980 Zea mays HOM05D003079 ORTHO05D003461 1.1e-06 58.9 144 33.3
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.5e-06 58.5 361 26.0
Sp6g18060 Schrenkiella parvula HOM05D003079 ORTHO05D003461 2.5e-06 57.8 275 25.5
vmacro09028 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 2.5e-06 57.8 78 46.2
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 4.3e-06 57.0 361 25.8
Os08g0497900 Oryza sativa ssp. japonica HOM05D003079 ORTHO05D003461 4.3e-06 57.0 139 29.5
VMungo1080G0483 Vigna mungo HOM05D003079 ORTHO05D003461 4.3e-06 57.0 271 24.7
CsaV3_3G003800 Cucumis sativus L. HOM05D003079 ORTHO05D003461 5.6e-06 56.6 268 27.2


User provided reference genes

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