Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 1.2e-200 703.0 364 100.0
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 2.2e-162 575.9 365 74.8
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 1.8e-159 566.2 370 74.1
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 5.2e-159 564.7 365 75.3
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 8.8e-159 563.9 364 75.3
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 4.4e-158 561.6 364 74.5
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 3.1e-156 555.4 364 73.9
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 4.2e-153 545.0 365 72.6
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 1.0e-151 540.4 364 70.1
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 1.2e-150 537.0 364 70.6
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.2e-150 537.0 364 70.6
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 1.5e-150 536.6 364 71.7
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.5e-150 536.6 365 71.8
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 9.8e-150 533.9 364 70.6
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 2.8e-149 532.3 364 72.5
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 8.3e-149 530.8 364 69.5
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 2.0e-147 526.2 364 71.2
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 1.9e-145 519.6 364 69.8
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 2.5e-145 519.2 367 68.4
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 9.5e-145 517.3 366 68.6
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 2.1e-144 516.2 364 70.3
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 6.1e-144 514.6 364 69.8
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 6.1e-144 514.6 349 69.9
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.0e-143 513.8 364 69.0
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 3.1e-143 512.3 365 68.8
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 4.0e-143 511.9 364 68.4
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 1.2e-142 510.4 364 67.6
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 1.2e-142 510.4 364 68.1
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 1.5e-142 510.0 364 67.6
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 1.5e-142 510.0 364 67.3
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 2.6e-142 509.2 364 67.6
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 2.6e-142 509.2 364 67.9
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 2.6e-142 509.2 365 68.2
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 7.5e-142 507.7 364 69.0
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 9.8e-142 507.3 365 68.8
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 1.7e-141 506.5 367 67.6
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 2.2e-141 506.1 364 68.1
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 2.9e-141 505.8 360 70.6
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 3.7e-141 505.4 364 69.0
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 6.4e-141 504.6 364 67.0
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 1.9e-140 503.1 364 65.9
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 3.2e-140 502.3 370 66.8
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 4.1e-140 501.9 364 66.5
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 4.1e-140 501.9 364 67.0
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 4.1e-140 501.9 364 66.5
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 4.1e-140 501.9 364 66.5
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 5.4e-140 501.5 364 69.8
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.6e-139 500.0 366 66.7
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 2.0e-139 499.6 372 64.8
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 2.0e-139 499.6 364 69.8
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 2.0e-139 499.6 364 65.9
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 2.0e-139 499.6 366 66.1
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.0e-139 499.6 371 65.8
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 2.0e-139 499.6 371 65.8
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 2.0e-139 499.6 364 68.1
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.7e-139 499.2 364 67.3
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 3.5e-139 498.8 365 67.7
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 3.5e-139 498.8 366 71.0
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 4.6e-139 498.4 364 66.8
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 6.0e-139 498.0 364 67.0
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 7.8e-139 497.7 365 66.8
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.0e-138 497.3 367 69.2
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 2.3e-138 496.1 364 65.4
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.3e-138 496.1 364 69.2
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 2.3e-138 496.1 364 65.9
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.3e-138 496.1 371 64.7
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 2.3e-138 496.1 370 67.0
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 3.0e-138 495.7 364 66.2
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 3.0e-138 495.7 364 66.5
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 3.9e-138 495.4 364 65.4
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 3.9e-138 495.4 364 69.0
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 5.0e-138 495.0 367 65.7
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 5.0e-138 495.0 364 67.6
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 6.6e-138 494.6 364 64.8
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 6.6e-138 494.6 364 68.4
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 8.6e-138 494.2 364 65.4
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 8.6e-138 494.2 364 65.4
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 8.6e-138 494.2 358 66.2
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 8.6e-138 494.2 364 68.4
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 1.1e-137 493.8 367 65.4
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.1e-137 493.8 364 67.3
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 1.5e-137 493.4 367 65.4
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 3.3e-137 492.3 364 65.4
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.3e-137 492.3 365 65.2
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 3.3e-137 492.3 364 64.8
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 3.3e-137 492.3 365 67.7
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 3.3e-137 492.3 364 65.7
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 3.3e-137 492.3 364 69.2
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 4.3e-137 491.9 364 65.4
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 7.3e-137 491.1 364 64.6
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 7.3e-137 491.1 364 67.3
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 9.5e-137 490.7 364 65.9
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 1.2e-136 490.3 364 64.3
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 4.7e-136 488.4 364 68.7
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 4.7e-136 488.4 364 67.6
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 8.0e-136 487.6 364 64.8
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 1.1e-135 487.3 364 65.9
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 4.0e-135 485.3 364 64.6
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 3.4e-134 482.3 370 63.5
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.4e-134 481.9 364 64.8
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 7.5e-134 481.1 365 64.4
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 1.3e-133 480.3 377 63.4
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.7e-133 479.9 364 63.5
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 4.9e-133 478.4 366 63.7
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 6.4e-133 478.0 345 66.4
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 8.3e-133 477.6 364 62.6
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.4e-132 476.9 366 63.1
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 1.9e-132 476.5 364 63.2
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 5.4e-132 474.9 407 59.2
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 5.4e-132 474.9 364 62.6
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 5.4e-132 474.9 370 63.0
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 1.2e-131 473.8 364 62.9
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 2.7e-131 472.6 365 64.1
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 2.7e-131 472.6 365 61.9
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 2.7e-131 472.6 364 65.1
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 3.0e-130 469.2 372 62.4
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 3.9e-130 468.8 365 66.0
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 3.9e-130 468.8 367 61.9
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 8.1e-128 461.1 371 60.9
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 1.2e-126 457.2 364 62.6
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 2.0e-126 456.4 370 60.8
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 3.4e-126 455.7 366 60.7
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 1.3e-125 453.8 372 59.9
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 1.4e-124 450.3 364 62.4
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 4.7e-120 435.3 368 59.0
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 2.0e-118 429.9 367 56.7
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 5.8e-118 428.3 369 55.0
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 9.9e-118 427.6 367 56.4
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 1.9e-116 423.3 365 55.6
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.5e-113 412.9 316 66.5
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.2e-110 404.1 301 65.4
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 2.9e-101 372.9 365 53.4
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 1.2e-99 367.5 307 59.0
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 2.5e-97 359.8 337 57.6
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 2.8e-96 356.3 336 58.3
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 1.0e-93 347.8 307 55.0
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 1.9e-92 343.6 364 50.3
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.2e-76 289.7 221 71.5
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 7.7e-70 268.5 364 43.4
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 2.7e-67 260.0 281 50.9
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 1.0e-66 258.1 366 40.7
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 1.8e-66 257.3 257 56.4
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 5.2e-58 229.2 183 69.9
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 4.8e-56 222.6 157 63.7
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 2.4e-55 220.3 363 38.3
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 2.0e-54 217.2 115 88.7
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.5e-52 211.1 126 79.4
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.6e-51 207.6 131 73.3
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 9.8e-33 145.2 206 40.3
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.1e-31 141.7 85 67.1
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.4e-31 140.6 85 67.1
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.4e-31 139.4 85 65.9
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 2.3e-29 134.0 142 52.8
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.9e-29 133.7 85 63.5
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 3.6e-27 126.7 106 62.3
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 2.3e-26 124.0 198 38.4
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 6.8e-26 122.5 139 42.4
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 1.1e-23 115.2 204 38.2
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 7.8e-22 109.0 59 84.7
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 2.3e-21 107.5 58 86.2
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 2.3e-21 107.5 63 81.0
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 2.3e-21 107.5 58 86.2
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 2.8e-19 100.5 75 61.3
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 5.2e-18 96.3 61 72.1
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 2.6e-17 94.0 55 80.0
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 3.4e-17 93.6 76 61.8
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 1.1e-15 88.6 76 53.9
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 2.4e-15 87.4 144 31.9
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 7.1e-15 85.9 59 61.0
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 1.5e-12 78.2 49 69.4
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.3e-12 76.6 39 71.8
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 4.7e-11 73.2 150 30.0
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 8.1e-11 72.4 68 57.4
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 1.1e-10 72.0 94 46.8
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 8.9e-10 68.9 50 60.0
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 2.6e-09 67.4 87 44.8
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 4.4e-09 66.6 68 45.6
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 2.4e-07 60.8 84 40.5
SGA_v2.0_scaffold373G50208 Striga asiatica HOM05D003641 ORTHO05D404367 3.2e-07 60.5 43 67.4
Sopen02g001110 Solanum pennellii HOM05D003641 ORTHO05D004915 2.7e-06 57.4 109 41.3
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 4.6e-06 56.6 159 24.5


User provided reference genes

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