Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006178.3 Olea europaea HOM05D005535 ORTHO05D006753 1.4e-175 619.8 368 100.0
Migut.I00138 Erythranthe guttata HOM05D005535 ORTHO05D006753 8.2e-96 354.8 371 60.1
MSTRG.11394 Avicennia marina HOM05D005535 ORTHO05D006753 4.5e-94 349.0 363 60.9
Dinv38677 Davidia involucrata HOM05D005535 ORTHO05D006753 1.4e-87 327.4 343 60.1
SalBow5G2281 Salvia bowleyana HOM05D005535 ORTHO05D006753 1.2e-86 324.3 347 58.5
SalBow5G0107 Salvia bowleyana HOM05D005535 ORTHO05D006753 2.0e-86 323.6 355 58.0
Nitab4.5_0004785g0010 Nicotiana tabacum HOM05D005535 ORTHO05D006753 1.9e-84 317.0 353 57.8
Actinidia37646 Actinidia chinensis HOM05D005535 ORTHO05D006753 5.2e-82 308.9 374 55.3
Cc04_g15390 Coffea canephora HOM05D005535 ORTHO05D006753 8.8e-82 308.1 370 55.4
GSVIVG01008044001 Vitis vinifera HOM05D005535 ORTHO05D006753 4.4e-81 305.8 341 56.9
Nitab4.5_0000785g0140 Nicotiana tabacum HOM05D005535 ORTHO05D006753 7.5e-81 305.1 367 55.9
Oeu022201.1 Olea europaea HOM05D005535 ORTHO05D006753 1.1e-79 301.2 324 57.1
Ciclev10020848m.g Citrus clementina HOM05D005535 ORTHO05D006753 1.4e-79 300.8 345 55.1
Atru.chr9.2302 Acer truncatum HOM05D005535 ORTHO05D006753 1.8e-79 300.4 319 58.0
Actinidia04914 Actinidia chinensis HOM05D005535 ORTHO05D006753 1.8e-79 300.4 351 55.0
CSS0007804 Camellia sinensis var. sinensis HOM05D005535 ORTHO05D006753 2.0e-78 297.0 368 54.3
Hma1.2p1_1617F.1_g293810 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 3.5e-78 296.2 352 55.7
Cfa018977 Carpinus fangiana HOM05D005535 ORTHO05D006753 5.9e-78 295.4 351 54.7
Lj9A460T58 Lonicera japonica HOM05D005535 ORTHO05D006753 1.3e-77 294.3 365 54.2
vmacro16564 Vaccinium macrocarpon HOM05D005535 ORTHO05D006753 3.8e-77 292.7 370 53.2
CSS0007998 Camellia sinensis var. sinensis HOM05D005535 ORTHO05D006753 2.5e-76 290.0 340 55.6
Nitab4.5_0000269g0110 Nicotiana tabacum HOM05D005535 ORTHO05D006753 3.3e-76 289.7 348 54.3
Haze_07363 Corylus avellana HOM05D005535 ORTHO05D006753 1.0e-74 284.6 351 54.4
QL10p015851 Quercus lobata HOM05D005535 ORTHO05D006753 1.4e-74 284.3 351 54.4
Nitab4.5_0004931g0020 Nicotiana tabacum HOM05D005535 ORTHO05D006753 6.8e-74 282.0 359 52.9
Actinidia19054 Actinidia chinensis HOM05D005535 ORTHO05D006753 2.6e-73 280.0 371 51.8
Rhsim08G0158400 Rhododendron simsii HOM05D005535 ORTHO05D006753 3.4e-73 279.6 372 51.6
SGA_v2.0_scaffold56G20044 Striga asiatica HOM05D005535 ORTHO05D006753 2.8e-72 276.6 380 52.6
Hma1.2p1_0104F.1_g050150 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 4.9e-72 275.8 387 50.6
Rhsim12G0158200 Rhododendron simsii HOM05D005535 ORTHO05D006753 1.4e-71 274.2 362 50.6
PGSC0003DMG401018143 Solanum tuberosum HOM05D005535 ORTHO05D006753 4.1e-71 272.7 344 52.9
Dinv19929 Davidia involucrata HOM05D005535 ORTHO05D006753 5.4e-71 272.3 339 55.2
Manes.06G095400 Manihot esculenta HOM05D005535 ORTHO05D006753 1.2e-70 271.2 342 53.5
Solyc06g070970.3 Solanum lycopersicum HOM05D005535 ORTHO05D006753 2.0e-70 270.4 375 53.1
Sopen06g027240 Solanum pennellii HOM05D005535 ORTHO05D006753 2.7e-70 270.0 375 52.5
Thecc.03G081300 Theobroma cacao HOM05D005535 ORTHO05D006753 1.7e-69 267.3 347 50.4
CiPaw.12G015700 Carya illinoinensis HOM05D005535 ORTHO05D006753 2.3e-69 266.9 355 51.3
Solyc03g113090.3 Solanum lycopersicum HOM05D005535 ORTHO05D006753 2.3e-69 266.9 352 55.1
Duzib084G1387 Durio zibethinus HOM05D005535 ORTHO05D006753 3.8e-69 266.2 340 50.9
Sopen03g032160 Solanum pennellii HOM05D005535 ORTHO05D006753 3.8e-69 266.2 352 51.7
Prupe.5G188200 Prunus persica HOM05D005535 ORTHO05D006753 8.6e-69 265.0 343 53.1
CANSAT80G1786 Cannabis sativa HOM05D005535 ORTHO05D006753 2.5e-68 263.5 358 51.4
PGR083G2381 Punica granatum HOM05D005535 ORTHO05D006753 9.5e-68 261.5 357 50.7
Actinidia34981 Actinidia chinensis HOM05D005535 ORTHO05D006753 1.6e-67 260.8 377 49.1
Peaxi162Scf00009g00219 Petunia axillaris HOM05D005535 ORTHO05D006753 6.1e-67 258.8 346 51.4
Duzib205G0302 Durio zibethinus HOM05D005535 ORTHO05D006753 5.2e-66 255.8 350 47.7
TAR371G0260 Trochodendron aralioides HOM05D005535 ORTHO05D006753 5.2e-66 255.8 339 50.4
CAN.G628.33 Capsicum annuum HOM05D005535 ORTHO05D006753 8.9e-66 255.0 339 51.6
Peaxi162Scf00013g00129 Petunia axillaris HOM05D005535 ORTHO05D006753 2.6e-65 253.4 323 52.0
Lj5A114T27 Lonicera japonica HOM05D005535 ORTHO05D006753 5.8e-65 252.3 307 53.1
FvH4_5g15300 Fragaria vesca HOM05D005535 ORTHO05D006753 7.5e-65 251.9 346 49.7
Gohir.D12G178800 Gossypium hirsutum HOM05D005535 ORTHO05D006753 7.5e-65 251.9 370 45.9
RcHm_v2.0_Chr7g0180761 Rosa chinensis HOM05D005535 ORTHO05D006753 1.3e-64 251.1 345 50.7
TAR629G1161 Trochodendron aralioides HOM05D005535 ORTHO05D006753 1.3e-64 251.1 326 50.3
FAN18G1286 Fragaria x ananassa HOM05D005535 ORTHO05D006753 3.7e-64 249.6 349 50.7
SGA_v2.0_scaffold162G37926 Striga asiatica HOM05D005535 ORTHO05D006753 6.4e-64 248.8 320 54.1
Nn3g17153 Nelumbo nucifera HOM05D005535 ORTHO05D006753 2.4e-63 246.9 347 50.7
FAN08G2745 Fragaria x ananassa HOM05D005535 ORTHO05D006753 4.1e-63 246.1 346 49.7
FAN13G1299 Fragaria x ananassa HOM05D005535 ORTHO05D006753 5.4e-63 245.7 349 50.7
Eucgr.B00441 Eucalyptus grandis HOM05D005535 ORTHO05D006753 7.0e-63 245.4 352 46.6
vmacro17524 Vaccinium macrocarpon HOM05D005535 ORTHO05D006753 3.5e-62 243.0 374 49.2
Gohir.A12G175600 Gossypium hirsutum HOM05D005535 ORTHO05D006753 1.0e-61 241.5 364 45.9
TWI60G0583 Tripterygium wilfordii HOM05D005535 ORTHO05D006753 3.9e-61 239.6 268 56.7
Gorai.008G191600 Gossypium raimondii HOM05D005535 ORTHO05D006753 5.0e-61 239.2 379 44.3
MBI01_g12912_MAGBIO Magnolia biondii HOM05D005535 ORTHO05D006753 1.2e-59 234.6 211 62.6
COL.COLO4_14041 Corchorus olitorius HOM05D005535 ORTHO05D006753 3.6e-59 233.0 383 44.4
arahy.Tifrunner.gnm1.ann1.WGP01G Arachis hypogaea HOM05D005535 ORTHO05D006753 1.4e-58 231.1 367 45.2
ClCG06G016340 Citrullus lanatus HOM05D005535 ORTHO05D006753 4.0e-58 229.6 372 47.0
Lj1g0015301 Lotus japonicus HOM05D005535 ORTHO05D006753 8.9e-58 228.4 391 44.0
Sc10g0009960 Simmondsia chinensis HOM05D005535 ORTHO05D006753 1.2e-57 228.0 378 46.8
Sed0009946 Sechium edule HOM05D005535 ORTHO05D006753 1.5e-57 227.6 366 46.4
AUR62021726 Chenopodium quinoa HOM05D005535 ORTHO05D006753 2.0e-57 227.3 367 44.7
Hund09363 Selenicereus undatus HOM05D005535 ORTHO05D006753 3.4e-57 226.5 371 45.6
EL10Ac5g10956 Beta vulgaris HOM05D005535 ORTHO05D006753 4.4e-57 226.1 371 45.3
Aqoxy3G00718 Aquilegia oxysepala HOM05D005535 ORTHO05D006753 9.8e-57 224.9 368 47.8
Glyma.04G173200 Glycine max HOM05D005535 ORTHO05D006753 1.3e-56 224.6 373 46.1
arahy.Tifrunner.gnm1.ann1.G5WMYY Arachis hypogaea HOM05D005535 ORTHO05D006753 6.4e-56 222.2 361 44.0
FAN04G1197 Fragaria x ananassa HOM05D005535 ORTHO05D006753 8.3e-56 221.9 350 48.0
MELO3C017158.2 Cucumis melo HOM05D005535 ORTHO05D006753 3.2e-55 219.9 372 46.2
TPR.G27376 Trifolium pratense HOM05D005535 ORTHO05D006753 3.2e-55 219.9 397 41.6
Ca_21840_v3 Cicer arietinum L. HOM05D005535 ORTHO05D006753 4.1e-55 219.5 363 45.2
Ah.02g113290 Amaranthus hybridus HOM05D005535 ORTHO05D006753 5.4e-55 219.2 369 50.4
CsaV3_1G002190 Cucumis sativus L. HOM05D005535 ORTHO05D006753 7.0e-55 218.8 371 46.9
Lalb_Chr12g0196771 Lupinus albus HOM05D005535 ORTHO05D006753 2.1e-54 217.2 364 46.2
Lj4g0008602 Lotus japonicus HOM05D005535 ORTHO05D006753 2.7e-54 216.9 333 45.3
AUR62008371 Chenopodium quinoa HOM05D005535 ORTHO05D006753 7.8e-54 215.3 356 44.7
ECA232G4425 Erigeron canadensis HOM05D005535 ORTHO05D006753 7.8e-54 215.3 368 44.8
Glyma.05G028700 Glycine max HOM05D005535 ORTHO05D006753 1.0e-53 214.9 359 47.4
Glyma.06G191000 Glycine max HOM05D005535 ORTHO05D006753 1.7e-53 214.2 373 45.3
VMungo1215G1657 Vigna mungo HOM05D005535 ORTHO05D006753 3.9e-53 213.0 358 45.3
Cpa.g.sc17.224 Carica papaya HOM05D005535 ORTHO05D006753 5.1e-53 212.6 323 48.3
MD14G1196400 Malus domestica HOM05D005535 ORTHO05D006753 6.6e-53 212.2 339 47.8
PSO832G1146 Papaver somniferum HOM05D005535 ORTHO05D006753 6.6e-53 212.2 369 45.5
HanXRQChr05g0158021 Helianthus annuus HOM05D005535 ORTHO05D006753 1.5e-52 211.1 362 45.9
Psat4g052400 Pisum sativum HOM05D005535 ORTHO05D006753 1.5e-52 211.1 336 45.2
HanXRQChr09g0271071 Helianthus annuus HOM05D005535 ORTHO05D006753 3.3e-52 209.9 347 44.4
MD06G1189400 Malus domestica HOM05D005535 ORTHO05D006753 1.2e-51 208.0 325 48.0
Lalb_Chr13g0303381 Lupinus albus HOM05D005535 ORTHO05D006753 1.6e-51 207.6 357 44.5
Phvul.009G189600 Phaseolus vulgaris HOM05D005535 ORTHO05D006753 2.8e-51 206.8 368 45.4
Aqoxy3G03311 Aquilegia oxysepala HOM05D005535 ORTHO05D006753 6.2e-51 205.7 310 47.4
Glyma.17G098100 Glycine max HOM05D005535 ORTHO05D006753 4.0e-50 203.0 388 42.5
PGSC0003DMG400033073 Solanum tuberosum HOM05D005535 ORTHO05D006753 4.0e-50 203.0 374 44.1
ATR1120G167 Amborella trichopoda HOM05D005535 ORTHO05D006753 5.2e-50 202.6 354 43.8
Medtr4g108100 Medicago truncatula HOM05D005535 ORTHO05D006753 5.2e-50 202.6 383 41.5
Sed0000211 Sechium edule HOM05D005535 ORTHO05D006753 8.9e-50 201.8 344 43.9
Sabra15G0089300 Salix brachista HOM05D005535 ORTHO05D006753 4.4e-49 199.5 359 45.1
unitig_26.g9639 Utricularia gibba HOM05D005535 ORTHO05D006753 1.3e-48 198.0 337 45.4
PSO591G0334 Papaver somniferum HOM05D005535 ORTHO05D006753 3.7e-48 196.4 369 43.9
Potri.015G063700 Populus trichocarpa HOM05D005535 ORTHO05D006753 3.7e-48 196.4 356 44.4
Phvul.003G191800 Phaseolus vulgaris HOM05D005535 ORTHO05D006753 4.9e-48 196.1 352 45.2
PSO478G1818 Papaver somniferum HOM05D005535 ORTHO05D006753 5.4e-47 192.6 224 54.5
A06p29250 Brassica napus HOM05D005535 ORTHO05D006753 3.9e-45 186.4 310 44.2
VMungo1309G2126 Vigna mungo HOM05D005535 ORTHO05D006753 5.1e-45 186.0 250 50.4
BraA06t25881Z Brassica rapa HOM05D005535 ORTHO05D006753 2.1e-43 180.6 375 40.5
PSO017G0680 Papaver somniferum HOM05D005535 ORTHO05D006753 4.7e-43 179.5 366 41.8
Sp2g25720 Schrenkiella parvula HOM05D005535 ORTHO05D006753 4.0e-42 176.4 358 39.4
HPP92_024074 Vanilla planifolia HOM05D005535 ORTHO05D006753 4.0e-42 176.4 201 53.2
AL8G39440 Arabidopsis lyrata HOM05D005535 ORTHO05D006753 5.8e-41 172.6 224 48.7
THA.LOC104821430 Tarenaya hassleriana HOM05D005535 ORTHO05D006753 5.8e-41 172.6 316 39.6
AT5G62550 Arabidopsis thaliana HOM05D005535 ORTHO05D006753 1.3e-40 171.4 224 49.1
BcaB02g09657 Brassica carinata HOM05D005535 ORTHO05D006753 2.2e-40 170.6 377 40.1
BcaC01g02485 Brassica carinata HOM05D005535 ORTHO05D006753 3.8e-40 169.9 380 39.2
C03p64280 Brassica napus HOM05D005535 ORTHO05D006753 3.8e-40 169.9 380 39.2
BolC3t18683H Brassica oleracea HOM05D005535 ORTHO05D006753 3.8e-40 169.9 380 39.2
Thhalv10004313m.g Eutrema salsugineum HOM05D005535 ORTHO05D006753 3.2e-39 166.8 423 34.3
Zm00001eb386190 Zea mays HOM05D005535 ORTHO05D006753 3.2e-39 166.8 361 39.3
Lsat_1_v5_gn_5_19040 Lactuca sativa HOM05D005535 ORTHO05D006753 2.7e-38 163.7 325 40.3
Os06g0589500 Oryza sativa ssp. japonica HOM05D005535 ORTHO05D006753 1.3e-37 161.4 364 36.8
Aa31LG11G1090 Aethionema arabicum HOM05D005535 ORTHO05D006753 1.5e-36 157.9 379 35.1
Zm00001eb277070 Zea mays HOM05D005535 ORTHO05D006753 4.3e-36 156.4 353 39.1
Carub.0008s2322 Capsella rubella HOM05D005535 ORTHO05D006753 2.1e-35 154.1 376 37.0
TWI34G0031 Tripterygium wilfordii HOM05D005535 ORTHO05D006753 5.6e-28 129.4 217 44.2
Oeu000640.1 Olea europaea HOM05D005535 ORTHO05D006753 1.7e-24 117.9 70 92.9
SEGI_01090 Sequoiadendron giganteum HOM05D005535 ORTHO05D006753 1.4e-23 114.8 205 40.0
CAN.G631.8 Capsicum annuum HOM05D008415 ORTHO05D010601 2.6e-09 67.4 211 30.8
Hma1.2p1_2585F.1_g324920 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 2.6e-09 67.4 140 34.3
Lj3g0013437 Lotus japonicus HOM05D008415 ORTHO05D010601 2.6e-09 67.4 105 34.3
Hma1.2p1_1931F.1_g307990 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 3.4e-09 67.0 140 34.3
PGSC0003DMG400008064 Solanum tuberosum HOM05D008415 ORTHO05D010601 4.5e-09 66.6 200 29.5
SalBow3G0300 Salvia bowleyana HOM05D008415 ORTHO05D010601 1.3e-08 65.1 237 28.7
vmacro14451 Vaccinium macrocarpon HOM05D008415 ORTHO05D010601 2.9e-08 63.9 95 38.9
Sopen11g027940 Solanum pennellii HOM05D008415 ORTHO05D010601 4.9e-08 63.2 200 29.5
Actinidia03741 Actinidia chinensis HOM05D008415 ORTHO05D010601 8.4e-08 62.4 123 35.8
MD01G1041800 Malus domestica HOM05D005535 ORTHO05D006753 2.5e-07 60.8 36 83.3
Psat7g223880 Pisum sativum HOM05D008415 ORTHO05D010601 2.5e-07 60.8 59 45.8
Eucgr.J00943 Eucalyptus grandis HOM05D008415 ORTHO05D010601 4.2e-07 60.1 90 38.9
Rhsim01G0218700 Rhododendron simsii HOM05D008415 ORTHO05D010601 4.2e-07 60.1 93 37.6
GSVIVG01025161001 Vitis vinifera HOM05D008415 ORTHO05D010601 7.1e-07 59.3 215 30.7
Lalb_Chr19g0137361 Lupinus albus HOM05D008415 ORTHO05D010601 9.3e-07 58.9 75 37.3
MELO3C025762.2 Cucumis melo HOM05D008415 ORTHO05D010601 1.2e-06 58.5 89 36.0
Glyma.12G070700 Glycine max HOM05D008415 ORTHO05D010601 1.2e-06 58.5 102 32.4
QL01p023166 Quercus lobata HOM05D008415 ORTHO05D010601 1.2e-06 58.5 155 31.0
SGA_v2.0_scaffold61G21159 Striga asiatica HOM05D008415 ORTHO05D010601 1.2e-06 58.5 114 34.2
Phvul.011G073700 Phaseolus vulgaris HOM05D008415 ORTHO05D010601 1.6e-06 58.2 101 35.6
ClCG02G021040 Citrullus lanatus HOM05D008415 ORTHO05D010601 2.1e-06 57.8 109 33.0
arahy.Tifrunner.gnm1.ann1.C7LIDW Arachis hypogaea HOM05D008415 ORTHO05D010601 2.7e-06 57.4 116 34.5
Solyc11g069210.2 Solanum lycopersicum HOM05D008415 ORTHO05D010601 2.7e-06 57.4 189 30.2
arahy.Tifrunner.gnm1.ann1.TY33PY Arachis hypogaea HOM05D008415 ORTHO05D010601 3.5e-06 57.0 161 32.3
Ca_19250_v3 Cicer arietinum L. HOM05D008415 ORTHO05D010601 3.5e-06 57.0 90 38.9
CsaV3_6G021730 Cucumis sativus L. HOM05D008415 ORTHO05D010601 3.5e-06 57.0 105 33.3
MSTRG.18650 Avicennia marina HOM05D008415 ORTHO05D010601 7.9e-06 55.8 213 28.6


User provided reference genes

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