Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006137.1 Olea europaea HOM05D000516 ORTHO05D290527 1.4e-63 246.1 121 100.0
Oeu046251.1 Olea europaea HOM05D000516 ORTHO05D000409 3.1e-36 155.2 138 62.3
Oeu054712.4 Olea europaea HOM05D000516 ORTHO05D000409 6.6e-18 94.4 162 40.1
MSTRG.24257 Avicennia marina HOM05D000516 ORTHO05D000409 5.8e-14 81.3 139 36.7
MSTRG.22326 Avicennia marina HOM05D000516 ORTHO05D000409 1.4e-12 76.6 138 35.5
SalBow8G4031 Salvia bowleyana HOM05D000516 ORTHO05D000409 3.3e-09 65.5 128 37.5
PGSC0003DMG401003720 Solanum tuberosum HOM05D000516 ORTHO05D000409 5.6e-09 64.7 176 30.7
MSTRG.22328 Avicennia marina HOM05D000516 ORTHO05D000409 9.5e-09 63.9 142 33.1
Peaxi162Scf00186g00117 Petunia axillaris HOM05D000516 ORTHO05D000409 1.2e-08 63.5 133 32.3
Thecc.08G039200 Theobroma cacao HOM05D000516 ORTHO05D000409 1.6e-08 63.2 137 35.0
CAN.G1271.7 Capsicum annuum HOM05D000516 ORTHO05D000409 2.1e-08 62.8 146 32.2
Nitab4.5_0001242g0080 Nicotiana tabacum HOM05D000516 ORTHO05D000409 4.7e-08 61.6 162 31.5
Atru.chr5.3161 Acer truncatum HOM05D000516 ORTHO05D000409 1.8e-07 59.7 149 32.9
Atru.chr5.3173 Acer truncatum HOM05D000516 ORTHO05D000409 1.8e-07 59.7 149 32.9
Manes.05G151400 Manihot esculenta HOM05D000516 ORTHO05D000409 1.8e-07 59.7 124 35.5
Solyc04g081190.3 Solanum lycopersicum HOM05D000516 ORTHO05D000409 2.3e-07 59.3 176 28.4
Sopen04g034800 Solanum pennellii HOM05D000516 ORTHO05D000409 2.3e-07 59.3 176 29.0
Peaxi162Scf00287g01621 Petunia axillaris HOM05D000516 ORTHO05D000409 5.2e-07 58.2 143 29.4
Sc02g0005100 Simmondsia chinensis HOM05D000516 ORTHO05D000409 6.8e-07 57.8 76 47.4
TWI12G0039 Tripterygium wilfordii HOM05D000516 ORTHO05D000409 8.9e-07 57.4 114 36.8
Solyc01g110480.4 Solanum lycopersicum HOM05D000516 ORTHO05D000409 1.2e-06 57.0 150 32.0
Sopen01g052610 Solanum pennellii HOM05D000516 ORTHO05D000409 1.2e-06 57.0 150 32.0
PGSC0003DMG400001659 Solanum tuberosum HOM05D000516 ORTHO05D000409 1.2e-06 57.0 150 32.0
AUR62019143 Chenopodium quinoa HOM05D000516 ORTHO05D000409 1.5e-06 56.6 100 41.0
Hund17231 Selenicereus undatus HOM05D000516 ORTHO05D000409 2.0e-06 56.2 74 44.6
Duzib052G0784 Durio zibethinus HOM05D000516 ORTHO05D000409 2.6e-06 55.8 116 37.1
Duzib132G0332 Durio zibethinus HOM05D000516 ORTHO05D000409 2.6e-06 55.8 157 31.8
Ciclev10001058m.g Citrus clementina HOM05D000516 ORTHO05D000409 3.4e-06 55.5 79 43.0
Cc02_g16830 Coffea canephora HOM05D000516 ORTHO05D000409 3.4e-06 55.5 122 38.5
EL10Ac1g00452 Beta vulgaris HOM05D000516 ORTHO05D000409 4.4e-06 55.1 55 49.1
Duzib116G0579 Durio zibethinus HOM05D000516 ORTHO05D000409 4.4e-06 55.1 89 40.4
Nitab4.5_0005489g0010 Nicotiana tabacum HOM05D000516 ORTHO05D000409 4.4e-06 55.1 161 30.4
SGA_v2.0_scaffold32G13257 Striga asiatica HOM05D000516 ORTHO05D000409 4.4e-06 55.1 152 31.6
CANSAT11G1174 Cannabis sativa HOM05D000516 ORTHO05D000409 5.8e-06 54.7 147 32.0
Duzib248G1035 Durio zibethinus HOM05D000516 ORTHO05D000409 5.8e-06 54.7 121 38.8
Prupe.1G369300 Prunus persica HOM05D000516 ORTHO05D000409 5.8e-06 54.7 146 29.5
Thecc.02G073600 Theobroma cacao HOM05D000516 ORTHO05D000409 5.8e-06 54.7 116 38.8
AUR62014406 Chenopodium quinoa HOM05D000516 ORTHO05D000409 7.6e-06 54.3 100 40.0
Duzib093G2208 Durio zibethinus HOM05D000516 ORTHO05D000409 7.6e-06 54.3 75 41.3
Nitab4.5_0005266g0040 Nicotiana tabacum HOM05D000516 ORTHO05D000409 9.9e-06 53.9 121 37.2
Nitab4.5_0008276g0020 Nicotiana tabacum HOM05D000516 ORTHO05D000409 9.9e-06 53.9 121 37.2
Potri.004G163800 Populus trichocarpa HOM05D000516 ORTHO05D000409 9.9e-06 53.9 92 42.4


User provided reference genes

Program Settings