Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006135.1 Olea europaea HOM05D001692 ORTHO05D003541 1.8e-166 589.3 338 100.0
Oeu026470.2 Olea europaea HOM05D001692 ORTHO05D003541 1.7e-92 343.6 311 64.6
Oeu006143.2 Olea europaea HOM05D001692 ORTHO05D003541 6.3e-50 202.2 124 83.1
Oeu026469.1 Olea europaea HOM05D001692 ORTHO05D003541 1.3e-47 194.5 262 51.1
MSTRG.15019 Avicennia marina HOM05D001692 ORTHO05D003541 1.1e-43 181.4 323 41.8
Dinv26680 Davidia involucrata HOM05D001692 ORTHO05D003541 8.2e-42 175.3 315 41.6
Migut.M00625 Erythranthe guttata HOM05D001692 ORTHO05D003541 2.4e-41 173.7 269 44.2
Haze_08475 Corylus avellana HOM05D001692 ORTHO05D003541 1.3e-39 167.9 311 40.5
Hma1.2p1_0280F.1_g112850 Hydrangea macrophylla HOM05D001692 ORTHO05D003541 5.5e-38 162.5 292 41.8
Cfa019475 Carpinus fangiana HOM05D001692 ORTHO05D003541 6.1e-37 159.1 271 41.7
Cc05_g10450 Coffea canephora HOM05D001692 ORTHO05D003541 3.9e-36 156.4 289 39.8
CiPaw.11G067800 Carya illinoinensis HOM05D001692 ORTHO05D003541 1.1e-33 148.3 239 43.1
Lj1C819T6 Lonicera japonica HOM05D001692 ORTHO05D003541 1.8e-33 147.5 264 42.0
AL3G26920 Arabidopsis lyrata HOM05D001692 ORTHO05D003541 3.1e-33 146.7 289 40.5
MD00G1185500 Malus domestica HOM05D001692 ORTHO05D003541 9.1e-33 145.2 229 42.4
Nitab4.5_0005492g0010 Nicotiana tabacum HOM05D001692 ORTHO05D003541 2.6e-32 143.7 284 40.5
Ciclev10018996m.g Citrus clementina HOM05D001692 ORTHO05D003541 3.5e-32 143.3 299 39.5
Nitab4.5_0006409g0010 Nicotiana tabacum HOM05D001692 ORTHO05D003541 4.5e-32 142.9 305 38.7
CSS0029038 Camellia sinensis var. sinensis HOM05D001692 ORTHO05D003541 7.7e-32 142.1 297 38.4
Manes.15G100600 Manihot esculenta HOM05D001692 ORTHO05D003541 7.7e-32 142.1 303 39.9
Thhalv10020164m.g Eutrema salsugineum HOM05D001692 ORTHO05D003541 2.2e-31 140.6 252 40.5
QL04p069054 Quercus lobata HOM05D001692 ORTHO05D003541 2.2e-31 140.6 312 39.1
RcHm_v2.0_Chr5g0028351 Rosa chinensis HOM05D001692 ORTHO05D003541 3.8e-31 139.8 288 40.6
Peaxi162Scf00111g01142 Petunia axillaris HOM05D001692 ORTHO05D003541 8.5e-31 138.7 312 37.5
Carub.0003s1429 Capsella rubella HOM05D001692 ORTHO05D003541 1.1e-30 138.3 289 38.8
CAN.G375.76 Capsicum annuum HOM05D001692 ORTHO05D003541 1.1e-30 138.3 290 40.3
FAN21G3942 Fragaria x ananassa HOM05D001692 ORTHO05D003541 1.1e-30 138.3 283 40.6
CSS0027870 Camellia sinensis var. sinensis HOM05D001692 ORTHO05D003541 1.9e-30 137.5 297 38.0
Prupe.4G152300 Prunus persica HOM05D001692 ORTHO05D003541 1.9e-30 137.5 299 39.1
Nn3g20725 Nelumbo nucifera HOM05D001692 ORTHO05D003541 3.2e-30 136.7 318 37.7
Peaxi162Scf00000g00522 Petunia axillaris HOM05D001692 ORTHO05D003541 3.2e-30 136.7 234 43.2
SGA_v2.0_scaffold73G24332 Striga asiatica HOM05D001692 ORTHO05D003541 3.2e-30 136.7 299 39.1
FvH4_3g17020 Fragaria vesca HOM05D001692 ORTHO05D003541 7.2e-30 135.6 283 40.3
FAN16G0240 Fragaria x ananassa HOM05D001692 ORTHO05D003541 7.2e-30 135.6 283 40.3
Dinv13327 Davidia involucrata HOM05D001692 ORTHO05D003541 9.4e-30 135.2 313 37.1
A01p39160 Brassica napus HOM05D001692 ORTHO05D003541 1.2e-29 134.8 241 41.9
Lalb_Chr20g0109021 Lupinus albus HOM05D001692 ORTHO05D003541 1.2e-29 134.8 310 37.7
TPR.G29673 Trifolium pratense HOM05D001692 ORTHO05D003541 1.2e-29 134.8 297 39.7
AT3G14590 Arabidopsis thaliana HOM05D001692 ORTHO05D003541 1.6e-29 134.4 248 41.1
C01p49860 Brassica napus HOM05D001692 ORTHO05D003541 2.1e-29 134.0 241 41.1
BolC1t04943H Brassica oleracea HOM05D001692 ORTHO05D003541 2.1e-29 134.0 241 41.1
Duzib268G0118 Durio zibethinus HOM05D001692 ORTHO05D003541 2.7e-29 133.7 317 37.2
FAN11G2256 Fragaria x ananassa HOM05D001692 ORTHO05D003541 2.7e-29 133.7 283 39.9
Sp3g12860 Schrenkiella parvula HOM05D001692 ORTHO05D003541 2.7e-29 133.7 268 40.7
TWI38G0873 Tripterygium wilfordii HOM05D001692 ORTHO05D003541 2.7e-29 133.7 309 37.2
BraA01t03961Z Brassica rapa HOM05D001692 ORTHO05D003541 4.7e-29 132.9 241 41.5
THA.LOC104822597 Tarenaya hassleriana HOM05D001692 ORTHO05D003541 6.1e-29 132.5 302 35.8
COL.COLO4_17437 Corchorus olitorius HOM05D001692 ORTHO05D003541 8.0e-29 132.1 310 36.8
Duzib213G0773 Durio zibethinus HOM05D001692 ORTHO05D003541 8.0e-29 132.1 294 37.4
Ca_03403_v3 Cicer arietinum L. HOM05D001692 ORTHO05D003541 1.4e-28 131.3 265 38.9
Lj3g0005272 Lotus japonicus HOM05D001692 ORTHO05D003541 1.8e-28 131.0 307 34.9
Nitab4.5_0007142g0010 Nicotiana tabacum HOM05D001692 ORTHO05D003541 1.8e-28 131.0 236 43.6
Psat1g009080 Pisum sativum HOM05D001692 ORTHO05D003541 3.0e-28 130.2 261 39.5
Nitab4.5_0000639g0080 Nicotiana tabacum HOM05D001692 ORTHO05D003541 4.0e-28 129.8 298 38.3
CARHR089550 Cardamine hirsuta HOM05D001692 ORTHO05D003541 5.2e-28 129.4 264 39.8
TWI38G2140 Tripterygium wilfordii HOM05D001692 ORTHO05D003541 5.2e-28 129.4 244 39.8
Medtr2g072180 Medicago truncatula HOM05D001692 ORTHO05D003541 8.8e-28 128.6 292 37.0
CSS0044469 Camellia sinensis var. sinensis HOM05D001692 ORTHO05D003541 1.2e-27 128.3 330 34.8
CANSAT56G4466 Cannabis sativa HOM05D001692 ORTHO05D003541 1.2e-27 128.3 312 33.7
Carub.0001s4280 Capsella rubella HOM05D001692 ORTHO05D003541 1.2e-27 128.3 239 39.3
Thecc.07G141900 Theobroma cacao HOM05D001692 ORTHO05D003541 1.2e-27 128.3 285 38.9
Actinidia12620 Actinidia chinensis HOM05D001692 ORTHO05D003541 2.6e-27 127.1 216 41.7
RhsimUnG0205700 Rhododendron simsii HOM05D001692 ORTHO05D003541 3.3e-27 126.7 297 37.0
Sp1g40090 Schrenkiella parvula HOM05D001692 ORTHO05D003541 3.3e-27 126.7 266 37.6
DCAR_017572 Daucus carota HOM05D001692 ORTHO05D003541 5.7e-27 125.9 252 40.1
DCAR_025852 Daucus carota HOM05D001692 ORTHO05D003541 5.7e-27 125.9 252 40.1
PGR031G3933 Punica granatum HOM05D001692 ORTHO05D003541 7.5e-27 125.6 267 37.5
Gorai.002G042800 Gossypium raimondii HOM05D001692 ORTHO05D003541 9.7e-27 125.2 280 37.9
Gohir.A01G043500 Gossypium hirsutum HOM05D001692 ORTHO05D003541 1.7e-26 124.4 269 36.4
Gohir.D01G034600 Gossypium hirsutum HOM05D001692 ORTHO05D003541 2.8e-26 123.6 258 38.8
CiPaw.12G046400 Carya illinoinensis HOM05D001692 ORTHO05D003541 3.7e-26 123.2 257 38.1
Aa31LG8G1800 Aethionema arabicum HOM05D001692 ORTHO05D003541 6.3e-26 122.5 261 39.1
unitig_62.g23092 Utricularia gibba HOM05D001692 ORTHO05D003541 6.3e-26 122.5 265 37.7
PGSC0003DMG400007079 Solanum tuberosum HOM05D001692 ORTHO05D003541 8.2e-26 122.1 281 37.4
Potri.001G379800 Populus trichocarpa HOM05D001692 ORTHO05D003541 1.1e-25 121.7 294 35.4
Thhalv10011273m.g Eutrema salsugineum HOM05D001692 ORTHO05D003541 1.4e-25 121.3 236 38.6
CARHR043850 Cardamine hirsuta HOM05D001692 ORTHO05D003541 1.8e-25 120.9 223 40.4
CAN.G315.9 Capsicum annuum HOM05D001692 ORTHO05D003541 2.4e-25 120.6 302 35.4
vmacro09425 Vaccinium macrocarpon HOM05D001692 ORTHO05D003541 2.4e-25 120.6 294 35.7
Sc03g0010920 Simmondsia chinensis HOM05D001692 ORTHO05D003541 3.1e-25 120.2 302 35.1
AT1G53590 Arabidopsis thaliana HOM05D001692 ORTHO05D003541 7.0e-25 119.0 263 36.5
BcaC05g29058 Brassica carinata HOM05D001692 ORTHO05D003541 1.6e-24 117.9 243 37.9
C05p52680 Brassica napus HOM05D001692 ORTHO05D003541 1.6e-24 117.9 243 37.9
BolC5t33947H Brassica oleracea HOM05D001692 ORTHO05D003541 2.0e-24 117.5 243 37.4
Prupe.4G152200 Prunus persica HOM05D001692 ORTHO05D003541 4.5e-24 116.3 215 36.3
BcaC05g29056 Brassica carinata HOM05D001692 ORTHO05D003541 5.9e-24 115.9 211 39.8
VMungo1080G1562 Vigna mungo HOM05D001692 ORTHO05D003541 5.9e-24 115.9 286 36.4
MD11G1276000 Malus domestica HOM05D001692 ORTHO05D003541 1.3e-23 114.8 256 37.5
HanXRQChr10g0305681 Helianthus annuus HOM05D001692 ORTHO05D003541 1.7e-23 114.4 256 35.2
Phvul.005G062600 Phaseolus vulgaris HOM05D001692 ORTHO05D003541 1.7e-23 114.4 270 36.7
BraA05t22295Z Brassica rapa HOM05D001692 ORTHO05D003541 2.2e-23 114.0 255 39.6
Nn4g26545 Nelumbo nucifera HOM05D001692 ORTHO05D003541 2.2e-23 114.0 266 36.8
BcaB02g10911 Brassica carinata HOM05D001692 ORTHO05D003541 2.9e-23 113.6 265 35.5
FAN25G2855 Fragaria x ananassa HOM05D001692 ORTHO05D003541 2.9e-23 113.6 170 44.7
TAR627G0639 Trochodendron aralioides HOM05D001692 ORTHO05D003541 6.5e-23 112.5 207 36.2
vmacro12002 Vaccinium macrocarpon HOM05D001692 ORTHO05D003541 6.5e-23 112.5 274 35.0
Actinidia03647 Actinidia chinensis HOM05D001692 ORTHO05D003541 8.5e-23 112.1 266 35.7
PGSC0003DMG400008571 Solanum tuberosum HOM05D001692 ORTHO05D003541 8.5e-23 112.1 264 34.8
A05p34830 Brassica napus HOM05D001692 ORTHO05D003541 1.5e-22 111.3 275 37.5
Eucgr.F03215 Eucalyptus grandis HOM05D001692 ORTHO05D003541 1.9e-22 110.9 292 34.2
Sopen07g030220 Solanum pennellii HOM05D001692 ORTHO05D003541 1.9e-22 110.9 313 33.9
ECA234G0027 Erigeron canadensis HOM05D001692 ORTHO05D003541 4.2e-22 109.8 323 32.2
A05p18190 Brassica napus HOM05D001692 ORTHO05D003541 7.2e-22 109.0 251 35.5
BraA05t20712Z Brassica rapa HOM05D001692 ORTHO05D003541 7.2e-22 109.0 251 35.5
BcaC08g44126 Brassica carinata HOM05D001692 ORTHO05D003541 1.6e-21 107.8 251 35.1
C06p15020 Brassica napus HOM05D001692 ORTHO05D003541 1.6e-21 107.8 245 35.5
BolC6t36679H Brassica oleracea HOM05D001692 ORTHO05D003541 1.6e-21 107.8 245 35.5
Sed0022537 Sechium edule HOM05D001692 ORTHO05D003541 2.1e-21 107.5 305 34.8
Solyc12g011420.2 Solanum lycopersicum HOM05D001692 ORTHO05D003541 2.1e-21 107.5 240 34.2
Aa31LG10G1660 Aethionema arabicum HOM05D001692 ORTHO05D003541 2.7e-21 107.1 231 37.2
CsaV3_4G032610 Cucumis sativus L. HOM05D001692 ORTHO05D003541 2.7e-21 107.1 283 35.0
Lsat_1_v5_gn_5_126041 Lactuca sativa HOM05D001692 ORTHO05D003541 6.1e-21 105.9 234 34.6
MBI10_g02221_MAGBIO Magnolia biondii HOM05D001692 ORTHO05D003541 6.1e-21 105.9 259 32.8
Sopen12g006770 Solanum pennellii HOM05D001692 ORTHO05D003541 8.0e-21 105.5 240 34.2
MD11G1275800 Malus domestica HOM05D001692 ORTHO05D003541 1.0e-20 105.1 284 35.9
MD03G1254900 Malus domestica HOM05D001692 ORTHO05D003541 1.8e-20 104.4 248 33.9
Sed0010110 Sechium edule HOM05D001692 ORTHO05D003541 2.3e-20 104.0 296 32.8
Manes.03G091048 Manihot esculenta HOM05D001692 ORTHO05D003541 3.0e-20 103.6 301 33.2
HanXRQChr12g0373531 Helianthus annuus HOM05D001692 ORTHO05D003541 5.2e-20 102.8 186 38.2
Aqoxy1G01723 Aquilegia oxysepala HOM05D001692 ORTHO05D003541 6.8e-20 102.4 267 35.2
Rhsim06G0186500 Rhododendron simsii HOM05D001692 ORTHO05D003541 1.2e-19 101.7 191 39.8
Glyma.13G261200 Glycine max HOM05D001692 ORTHO05D003541 2.0e-19 100.9 298 34.9
MELO3C025594.2 Cucumis melo HOM05D001692 ORTHO05D003541 2.6e-19 100.5 295 36.3
Hund02324 Selenicereus undatus HOM05D001692 ORTHO05D003541 2.6e-19 100.5 286 31.5
Solyc07g061950.4 Solanum lycopersicum HOM05D001692 ORTHO05D003541 3.4e-19 100.1 276 35.5
Glyma.15G245600 Glycine max HOM05D001692 ORTHO05D003541 9.8e-19 98.6 294 33.7
Lsat_1_v5_gn_9_101380 Lactuca sativa HOM05D001692 ORTHO05D003541 2.2e-18 97.4 298 30.2
BcaB06g25372 Brassica carinata HOM05D001692 ORTHO05D003541 2.8e-18 97.1 258 34.9
arahy.Tifrunner.gnm1.ann1.SDH4Q1 Arachis hypogaea HOM05D001692 ORTHO05D003541 3.7e-18 96.7 293 30.4
FAN11G2574 Fragaria x ananassa HOM05D001692 ORTHO05D003541 4.8e-18 96.3 244 34.0
ECA240G0884 Erigeron canadensis HOM05D001692 ORTHO05D003541 6.3e-18 95.9 273 33.7
FvH4_3g16980 Fragaria vesca HOM05D001692 ORTHO05D003541 8.3e-18 95.5 244 34.0
FAN16G2563 Fragaria x ananassa HOM05D001692 ORTHO05D003541 8.3e-18 95.5 244 34.0
RcHm_v2.0_Chr5g0028301 Rosa chinensis HOM05D001692 ORTHO05D003541 1.1e-17 95.1 241 34.0
Lalb_Chr01g0016131 Lupinus albus HOM05D001692 ORTHO05D003541 2.4e-17 94.0 256 33.6
GSVIVG01000623001 Vitis vinifera HOM05D001692 ORTHO05D003541 3.1e-17 93.6 226 35.4
Sc16g0007860 Simmondsia chinensis HOM05D001692 ORTHO05D003541 5.4e-17 92.8 297 31.0
Eucgr.F01402 Eucalyptus grandis HOM05D001692 ORTHO05D003541 7.0e-17 92.4 260 32.3
arahy.Tifrunner.gnm1.ann1.RU54A6 Arachis hypogaea HOM05D001692 ORTHO05D003541 2.7e-16 90.5 296 30.1
EL10Ac4g08465 Beta vulgaris HOM05D001692 ORTHO05D003541 2.7e-16 90.5 263 34.6
Gohir.A04G046400 Gossypium hirsutum HOM05D001692 ORTHO05D003541 3.5e-16 90.1 296 31.1
HanXRQChr03g0072701 Helianthus annuus HOM05D001692 ORTHO05D003541 4.5e-16 89.7 263 30.4
Gohir.A07G155726 Gossypium hirsutum HOM05D001692 ORTHO05D003541 7.7e-16 89.0 264 32.6
BcaC09g48428 Brassica carinata HOM05D001692 ORTHO05D003541 6.5e-15 85.9 149 40.9
PSO541G4432 Papaver somniferum HOM05D001692 ORTHO05D003541 6.5e-15 85.9 269 34.9
SalBow8G2367 Salvia bowleyana HOM05D001692 ORTHO05D003541 4.2e-14 83.2 231 35.1
HPP92_002947 Vanilla planifolia HOM05D001692 ORTHO05D003541 4.2e-14 83.2 209 31.6
MBI07_g26364_MAGBIO Magnolia biondii HOM05D001692 ORTHO05D003541 1.2e-13 81.6 242 28.9
AUR62037985 Chenopodium quinoa HOM05D001692 ORTHO05D003541 4.7e-13 79.7 234 32.5
PSO675G5015 Papaver somniferum HOM05D001692 ORTHO05D003541 6.1e-13 79.3 195 32.8
Os02g0313700 Oryza sativa ssp. japonica HOM05D001692 ORTHO05D003541 1.4e-12 78.2 232 28.0
PSO541G5530 Papaver somniferum HOM05D001692 ORTHO05D003541 1.8e-12 77.8 195 32.3
AUR62019704 Chenopodium quinoa HOM05D001692 ORTHO05D003541 2.3e-12 77.4 219 32.9
Zm00001eb203260 Zea mays HOM05D001692 ORTHO05D003541 6.8e-12 75.9 253 27.7
Ah.06g187540 Amaranthus hybridus HOM05D001692 ORTHO05D003541 1.5e-11 74.7 227 35.7
C01p49900 Brassica napus HOM05D001692 ORTHO05D003541 4.4e-11 73.2 214 32.2
BolC1t04947H Brassica oleracea HOM05D001692 ORTHO05D003541 4.4e-11 73.2 214 32.2
MD03G1254200 Malus domestica HOM05D001692 ORTHO05D003541 1.3e-10 71.6 80 51.2
MD03G1254300 Malus domestica HOM05D001692 ORTHO05D003541 8.3e-10 68.9 128 36.7
ATR0585G029 Amborella trichopoda HOM05D001692 ORTHO05D003541 3.8e-07 60.1 257 27.2


User provided reference genes

Program Settings