Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006131.1 Olea europaea HOM05D006012 ORTHO05D007315 9.1e-122 440.3 226 100.0
Oeu006134.1 Olea europaea HOM05D006012 ORTHO05D007315 9.9e-84 313.9 201 83.1
Oeu009873.3 Olea europaea HOM05D006012 ORTHO05D007315 2.4e-82 309.3 218 76.6
MSTRG.26432 Avicennia marina HOM05D006012 ORTHO05D007315 8.4e-51 204.5 215 54.4
SalBow5G4668 Salvia bowleyana HOM05D006012 ORTHO05D007315 1.0e-48 197.6 199 58.3
SGA_v2.0_scaffold340G49316 Striga asiatica HOM05D003442 ORTHO05D007315 6.9e-45 184.9 185 58.4
CSS0007923 Camellia sinensis var. sinensis HOM05D006012 ORTHO05D007315 5.5e-42 175.3 216 51.9
CSS0032241 Camellia sinensis var. sinensis HOM05D006012 ORTHO05D007315 5.5e-42 175.3 216 51.9
Cc05_g09920 Coffea canephora HOM05D006012 ORTHO05D007315 2.7e-41 172.9 224 50.9
SGA_v2.0_scaffold153G36899 Striga asiatica HOM05D006232 ORTHO05D007315 7.9e-41 171.4 171 57.3
Actinidia35189 Actinidia chinensis HOM05D006012 ORTHO05D007315 2.0e-39 166.8 219 51.1
Dinv26631 Davidia involucrata HOM05D006012 ORTHO05D007315 1.7e-38 163.7 219 49.3
Solyc12g011270.2 Solanum lycopersicum HOM05D006012 ORTHO05D007315 1.7e-38 163.7 218 49.5
Sopen12g006600 Solanum pennellii HOM05D006012 ORTHO05D007315 1.7e-38 163.7 218 49.5
PGSC0003DMG402007845 Solanum tuberosum HOM05D006012 ORTHO05D007315 2.2e-38 163.3 218 49.1
vmacro09453 Vaccinium macrocarpon HOM05D006012 ORTHO05D007315 2.2e-38 163.3 204 52.5
Lj8C140T21 Lonicera japonica HOM05D006012 ORTHO05D007315 8.2e-38 161.4 215 47.4
Lsat_1_v5_gn_9_103320 Lactuca sativa HOM05D006012 ORTHO05D007315 2.0e-36 156.8 216 49.5
Nn1g07641 Nelumbo nucifera HOM05D006012 ORTHO05D007315 5.0e-35 152.1 200 50.5
Nitab4.5_0000639g0250 Nicotiana tabacum HOM05D006012 ORTHO05D007315 1.4e-34 150.6 216 47.2
ECA240G1168 Erigeron canadensis HOM05D006012 ORTHO05D007315 2.5e-34 149.8 198 50.0
A09p28100 Brassica napus HOM05D006012 ORTHO05D007315 5.5e-34 148.7 186 47.8
HanXRQChr13g0397181 Helianthus annuus HOM05D006012 ORTHO05D007315 5.5e-34 148.7 198 50.0
Nitab4.5_0000505g0060 Nicotiana tabacum HOM05D006012 ORTHO05D007315 5.5e-34 148.7 212 47.6
Peaxi162Scf00000g06018 Petunia axillaris HOM05D006012 ORTHO05D007315 7.2e-34 148.3 227 44.5
THA.LOC104819018 Tarenaya hassleriana HOM05D006012 ORTHO05D007315 7.2e-34 148.3 199 48.2
AL6G45290 Arabidopsis lyrata HOM05D006012 ORTHO05D007315 9.4e-34 147.9 186 50.0
Atru.chr1.951 Acer truncatum HOM05D006012 ORTHO05D007315 2.7e-33 146.4 201 50.2
BcaC04g21109 Brassica carinata HOM05D006012 ORTHO05D007315 3.6e-33 146.0 186 46.8
C09p35600 Brassica napus HOM05D006012 ORTHO05D007315 3.6e-33 146.0 186 46.8
Carub.0006s2994 Capsella rubella HOM05D006012 ORTHO05D007315 4.7e-33 145.6 199 47.7
BraA09t38374Z Brassica rapa HOM05D006012 ORTHO05D007315 1.4e-32 144.1 186 46.8
TWI18G0871 Tripterygium wilfordii HOM05D006012 ORTHO05D007315 1.4e-32 144.1 200 49.5
AT4G11120 Arabidopsis thaliana HOM05D006012 ORTHO05D007315 3.9e-32 142.5 187 48.1
HanXRQChr09g0257481 Helianthus annuus HOM05D006012 ORTHO05D007315 3.9e-32 142.5 198 49.5
MBI14_g12732_MAGBIO Magnolia biondii HOM05D006012 ORTHO05D007315 5.1e-32 142.1 199 45.7
Thhalv10028718m.g Eutrema salsugineum HOM05D006012 ORTHO05D007315 2.6e-31 139.8 185 47.6
Duzib211G0637 Durio zibethinus HOM05D006012 ORTHO05D007315 3.3e-31 139.4 200 46.0
ATR0751G237 Amborella trichopoda HOM05D006012 ORTHO05D007315 7.4e-31 138.3 204 48.0
Sp6g06290 Schrenkiella parvula HOM05D006012 ORTHO05D007315 9.7e-31 137.9 186 46.2
Aqoxy6G00639 Aquilegia oxysepala HOM05D006012 ORTHO05D007315 1.7e-30 137.1 218 45.0
AUR62040810 Chenopodium quinoa HOM05D006012 ORTHO05D007315 1.7e-30 137.1 216 46.3
Thecc.01G203100 Theobroma cacao HOM05D006012 ORTHO05D007315 1.7e-30 137.1 200 46.0
BcaC01g04641 Brassica carinata HOM05D006012 ORTHO05D007315 2.8e-30 136.3 186 46.8
Manes.13G058700 Manihot esculenta HOM05D006012 ORTHO05D007315 2.8e-30 136.3 203 49.3
TAR629G0946 Trochodendron aralioides HOM05D006012 ORTHO05D007315 2.8e-30 136.3 200 47.5
Gohir.A07G162400 Gossypium hirsutum HOM05D006012 ORTHO05D007315 4.8e-30 135.6 200 45.0
MD09G1258600 Malus domestica HOM05D006012 ORTHO05D007315 4.8e-30 135.6 127 63.0
Gohir.D07G169000 Gossypium hirsutum HOM05D006012 ORTHO05D007315 1.8e-29 133.7 200 45.5
CARHR255460 Cardamine hirsuta HOM05D006012 ORTHO05D007315 2.4e-29 133.3 186 46.2
Gorai.N000600 Gossypium raimondii HOM05D006012 ORTHO05D007315 2.4e-29 133.3 200 45.5
Cpa.g.sc8.4 Carica papaya HOM05D006012 ORTHO05D007315 3.1e-29 132.9 200 47.5
CDE05G0700 Ceratophyllum demersum HOM05D006012 ORTHO05D007315 3.1e-29 132.9 141 53.2
AUR62036845 Chenopodium quinoa HOM05D006012 ORTHO05D007315 4.1e-29 132.5 216 44.9
BcaB01g01588 Brassica carinata HOM05D006012 ORTHO05D007315 5.3e-29 132.1 200 45.0
Ciclev10020467m.g Citrus clementina HOM05D006012 ORTHO05D007315 7.0e-29 131.7 223 44.8
FAN04G1133 Fragaria x ananassa HOM05D006012 ORTHO05D007315 1.2e-28 131.0 188 45.7
PSO063G6058 Papaver somniferum HOM05D006012 ORTHO05D007315 2.6e-28 129.8 185 48.1
Sc15g0007370 Simmondsia chinensis HOM05D006012 ORTHO05D007315 3.5e-28 129.4 195 46.7
VMungo0464G1120 Vigna mungo HOM05D006012 ORTHO05D007315 3.5e-28 129.4 136 56.6
Lj2g0010575 Lotus japonicus HOM05D006012 ORTHO05D007315 4.5e-28 129.0 120 64.2
Prupe.3G150500 Prunus persica HOM05D006012 ORTHO05D007315 4.5e-28 129.0 150 54.7
A03p29140 Brassica napus HOM05D006012 ORTHO05D007315 7.7e-28 128.3 144 53.5
BraA03t12108Z Brassica rapa HOM05D006012 ORTHO05D007315 7.7e-28 128.3 144 53.5
RcHm_v2.0_Chr7g0222291 Rosa chinensis HOM05D006012 ORTHO05D007315 7.7e-28 128.3 133 57.1
arahy.Tifrunner.gnm1.ann1.IH2J48 Arachis hypogaea HOM05D006012 ORTHO05D007315 2.2e-27 126.7 120 63.3
arahy.Tifrunner.gnm1.ann1.X95WAW Arachis hypogaea HOM05D006012 ORTHO05D007315 2.2e-27 126.7 120 63.3
Migut.K00294 Erythranthe guttata HOM05D006012 ORTHO05D007315 2.9e-27 126.3 133 59.4
Lalb_Chr09g0334741 Lupinus albus HOM05D006012 ORTHO05D007315 2.9e-27 126.3 136 57.4
TPR.G20318 Trifolium pratense HOM05D006012 ORTHO05D007315 2.9e-27 126.3 124 61.3
FvH4_3g28810 Fragaria vesca HOM05D006012 ORTHO05D007315 5.0e-27 125.6 122 60.7
FAN11G1416 Fragaria x ananassa HOM05D006012 ORTHO05D007315 5.0e-27 125.6 122 60.7
FAN21G0516 Fragaria x ananassa HOM05D006012 ORTHO05D007315 5.0e-27 125.6 122 60.7
RcHm_v2.0_Chr5g0052201 Rosa chinensis HOM05D006012 ORTHO05D007315 5.0e-27 125.6 122 61.5
Sed0024337 Sechium edule HOM05D006012 ORTHO05D007315 6.5e-27 125.2 200 44.5
ClCG05G010720 Citrullus lanatus HOM05D006012 ORTHO05D007315 8.5e-27 124.8 155 56.8
Psat1g052160 Pisum sativum HOM05D006012 ORTHO05D007315 8.5e-27 124.8 120 62.5
CiPaw.04G044600 Carya illinoinensis HOM05D006012 ORTHO05D007315 1.1e-26 124.4 137 56.2
FAN16G0874 Fragaria x ananassa HOM05D006012 ORTHO05D007315 1.1e-26 124.4 122 59.8
GSVIVG01015570001 Vitis vinifera HOM05D006012 ORTHO05D007315 1.1e-26 124.4 136 58.1
PGR044G1532 Punica granatum HOM05D006012 ORTHO05D007315 1.5e-26 124.0 141 57.4
Aa31LG5G18160 Aethionema arabicum HOM05D006012 ORTHO05D007315 1.9e-26 123.6 186 45.7
FAN25G1383 Fragaria x ananassa HOM05D006012 ORTHO05D007315 1.9e-26 123.6 122 59.0
BcaB01g02714 Brassica carinata HOM05D006012 ORTHO05D007315 2.5e-26 123.2 136 54.4
Ca_04122_v3 Cicer arietinum L. HOM05D006012 ORTHO05D007315 2.5e-26 123.2 132 57.6
EL10Ac1g00408 Beta vulgaris HOM05D006012 ORTHO05D007315 4.2e-26 122.5 216 43.5
Haze_14200 Corylus avellana HOM05D006012 ORTHO05D007315 4.2e-26 122.5 136 55.9
Sabra14G0131900 Salix brachista HOM05D006012 ORTHO05D007315 4.2e-26 122.5 202 47.0
Zm00001eb160260 Zea mays HOM05D006012 ORTHO05D007315 4.2e-26 122.5 119 57.1
Ah.11g041370 Amaranthus hybridus HOM05D006012 ORTHO05D007315 5.5e-26 122.1 208 42.8
Eucgr.K01363 Eucalyptus grandis HOM05D006012 ORTHO05D007315 7.2e-26 121.7 134 57.5
MELO3C020320.2 Cucumis melo HOM05D006012 ORTHO05D007315 1.2e-25 120.9 143 58.0
Potri.014G172300 Populus trichocarpa HOM05D006012 ORTHO05D007315 1.6e-25 120.6 137 56.2
BolC3t15847H Brassica oleracea HOM05D006012 ORTHO05D007315 2.1e-25 120.2 170 45.3
Medtr6g003970 Medicago truncatula HOM05D006012 ORTHO05D007315 2.7e-25 119.8 124 57.3
CsaV3_3G017730 Cucumis sativus L. HOM05D006012 ORTHO05D007315 3.6e-25 119.4 201 45.3
Sed0020192 Sechium edule HOM05D006012 ORTHO05D007315 4.7e-25 119.0 150 54.7
COL.COLO4_24667 Corchorus olitorius HOM05D006012 ORTHO05D007315 6.1e-25 118.6 122 59.0
CANSAT80G2879 Cannabis sativa HOM05D006012 ORTHO05D007315 1.4e-24 117.5 126 54.0
HPP92_021924 Vanilla planifolia HOM05D006012 ORTHO05D007315 1.1e-23 114.4 171 43.9
SHI10195 Sapria himalayana HOM05D006012 ORTHO05D007315 5.7e-23 112.1 132 53.8
Phvul.004G001500 Phaseolus vulgaris HOM05D006012 ORTHO05D007315 2.8e-22 109.8 133 53.4
QL02p049241 Quercus lobata HOM05D006012 ORTHO05D007315 8.2e-22 108.2 129 54.3
Glyma.19G001300 Glycine max HOM05D006012 ORTHO05D007315 1.1e-21 107.8 115 58.3
SEGI_03282 Sequoiadendron giganteum HOM05D006012 ORTHO05D007315 1.4e-21 107.5 116 52.6
QL02p049408 Quercus lobata HOM05D006012 ORTHO05D007315 1.8e-21 107.1 129 53.5
DCAR_021073 Daucus carota HOM05D006012 ORTHO05D007315 8.5e-19 98.2 103 57.3
SMO364G0063 Selaginella moellendorffii HOM05D006012 ORTHO05D007315 1.0e-16 91.3 115 48.7
Mapoly0072s0022 Marchantia polymorpha HOM05D006012 ORTHO05D007315 1.8e-16 90.5 130 43.8
Pp3c10_9620 Physcomitrium patens HOM05D006012 ORTHO05D007315 5.2e-16 89.0 154 42.9
Pp3c1_21680 Physcomitrium patens HOM05D006012 ORTHO05D007315 3.5e-12 76.3 153 35.9
SMO364G0746 Selaginella moellendorffii HOM05D006012 ORTHO05D007315 2.9e-11 73.2 72 55.6
SMO364G0407 Selaginella moellendorffii HOM05D006012 ORTHO05D007315 3.8e-11 72.8 76 52.6
MD09G1267800 Malus domestica HOM05D006012 ORTHO05D007315 1.6e-09 67.4 50 72.0
AagrBONN_evm.TU.Sc2ySwM_369.366 Anthoceros agrestis HOM05D006012 ORTHO05D007315 4.7e-09 65.9 96 42.7
CBR_g24367 Chara braunii HOM05D006012 ORTHO05D007315 8.0e-09 65.1 105 43.8
Pp3c14_4820 Physcomitrium patens HOM05D006012 ORTHO05D007315 3.0e-08 63.2 102 43.1
ATR0315G017 Amborella trichopoda HOM05D004115 ORTHO05D005004 3.4e-07 59.7 142 33.8
FvH4_5g29401 Fragaria vesca HOM05D006012 ORTHO05D007315 4.4e-07 59.3 107 37.4
Cre10.g435500 Chlamydomonas reinhardtii HOM05D006012 ORTHO05D007315 5.7e-07 58.9 120 37.5
SMO364G0950 Selaginella moellendorffii HOM05D004115 ORTHO05D005004 5.7e-07 58.9 97 41.2
CDE08G1325 Ceratophyllum demersum HOM05D004115 ORTHO05D005004 7.5e-07 58.5 143 32.2
Lalb_Chr24g0397481 Lupinus albus HOM05D004115 ORTHO05D005004 7.5e-07 58.5 105 38.1
CDE02G3981 Ceratophyllum demersum HOM05D004115 ORTHO05D005004 9.8e-07 58.2 143 31.5
Thhalv10024316m.g Eutrema salsugineum HOM05D004115 ORTHO05D005004 1.3e-06 57.8 111 36.9
Lj7A657T48 Lonicera japonica HOM05D004115 ORTHO05D005004 1.3e-06 57.8 96 40.6
Sp7g27000 Schrenkiella parvula HOM05D004115 ORTHO05D005004 1.3e-06 57.8 111 36.9
PSO210G1769 Papaver somniferum HOM05D004115 ORTHO05D005004 1.7e-06 57.4 100 39.0
PSO210G7660 Papaver somniferum HOM05D004115 ORTHO05D005004 1.7e-06 57.4 100 39.0
Hund09224 Selenicereus undatus HOM05D004115 ORTHO05D005004 1.7e-06 57.4 96 40.6
ClCG06G008850 Citrullus lanatus HOM05D004115 ORTHO05D005004 2.8e-06 56.6 96 39.6
Gohir.A06G064700 Gossypium hirsutum HOM05D004115 ORTHO05D005004 3.7e-06 56.2 141 32.6
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 4.9e-06 55.8 111 36.0
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 4.9e-06 55.8 110 36.4
C01p10470 Brassica napus HOM05D004115 ORTHO05D005004 4.9e-06 55.8 110 36.4
BolC1t01006H Brassica oleracea HOM05D004115 ORTHO05D005004 4.9e-06 55.8 110 36.4
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 4.9e-06 55.8 110 36.4
Lalb_Chr14g0371681 Lupinus albus HOM05D004115 ORTHO05D005004 4.9e-06 55.8 105 37.1
Sabra18G0072200 Salix brachista HOM05D004115 ORTHO05D005004 4.9e-06 55.8 96 39.6
Sed0004305 Sechium edule HOM05D004115 ORTHO05D005004 4.9e-06 55.8 96 39.6
unitig_37.g12650 Utricularia gibba HOM05D004115 ORTHO05D005004 4.9e-06 55.8 100 39.0
Actinidia09435 Actinidia chinensis HOM05D004115 ORTHO05D005004 6.3e-06 55.5 96 39.6
Aa31LG2G21550 Aethionema arabicum HOM05D004115 ORTHO05D005004 6.3e-06 55.5 146 32.2
CBR_g47124 Chara braunii HOM05D004115 ORTHO05D005004 6.3e-06 55.5 96 40.6
Glyma.01G145400 Glycine max HOM05D004115 ORTHO05D005004 6.3e-06 55.5 105 36.2
Hma1.2p1_1151F.1_g261850 Hydrangea macrophylla HOM05D004115 ORTHO05D005004 6.3e-06 55.5 115 39.1
THA.LOC104804019 Tarenaya hassleriana HOM05D004115 ORTHO05D005004 6.3e-06 55.5 100 38.0
THA.LOC104814561 Tarenaya hassleriana HOM05D004115 ORTHO05D005004 6.3e-06 55.5 100 38.0
Atru.chr7.1389 Acer truncatum HOM05D004115 ORTHO05D005004 8.3e-06 55.1 96 39.6
AL7G23380 Arabidopsis lyrata HOM05D004115 ORTHO05D005004 8.3e-06 55.1 111 36.0
arahy.Tifrunner.gnm1.ann1.T3DUTL Arachis hypogaea HOM05D004115 ORTHO05D005004 8.3e-06 55.1 105 37.1
SEGI_05158 Sequoiadendron giganteum HOM05D004115 ORTHO05D005004 8.3e-06 55.1 141 31.2


User provided reference genes

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