Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006123.1 Olea europaea HOM05D007618 ORTHO05D009606 1.2e-42 176.0 86 100.0
SalBow1G1919 Salvia bowleyana HOM05D007618 ORTHO05D009606 4.8e-23 110.9 74 73.0
EL10Ac9g21249 Beta vulgaris HOM05D007618 ORTHO05D009606 5.0e-20 100.9 54 85.2
Migut.B00014 Erythranthe guttata HOM05D007618 ORTHO05D009606 6.5e-20 100.5 52 90.4
MSTRG.19948 Avicennia marina HOM05D007618 ORTHO05D009606 1.1e-19 99.8 52 88.5
ClCG02G010360 Citrullus lanatus HOM05D007618 ORTHO05D009606 1.9e-19 99.0 56 80.4
DCAR_022841 Daucus carota HOM05D007618 ORTHO05D009606 3.2e-19 98.2 54 83.3
PGSC0003DMG401014675 Solanum tuberosum HOM05D007618 ORTHO05D009606 5.5e-19 97.4 56 78.6
arahy.Tifrunner.gnm1.ann1.I7PWT1 Arachis hypogaea HOM05D007618 ORTHO05D009606 7.2e-19 97.1 56 78.6
Dinv14162 Davidia involucrata HOM05D007618 ORTHO05D009606 9.4e-19 96.7 52 86.5
FAN24G0716 Fragaria x ananassa HOM05D007618 ORTHO05D009606 3.6e-18 94.7 56 80.4
Hma1.2p1_0271F.1_g108950 Hydrangea macrophylla HOM05D007618 ORTHO05D009606 3.6e-18 94.7 52 82.7
Lalb_Chr08g0246841 Lupinus albus HOM05D007618 ORTHO05D009606 3.6e-18 94.7 52 80.8
Phvul.009G116000 Phaseolus vulgaris HOM05D007618 ORTHO05D009606 4.7e-18 94.4 52 78.8
HanXRQChr14g0459071 Helianthus annuus HOM05D007618 ORTHO05D009606 6.1e-18 94.0 52 82.7
QL11p055874 Quercus lobata HOM05D007618 ORTHO05D009606 8.0e-18 93.6 54 75.9
Hund06167 Selenicereus undatus HOM05D007618 ORTHO05D009606 8.0e-18 93.6 52 80.8
TPR.G38509 Trifolium pratense HOM05D007618 ORTHO05D009606 8.0e-18 93.6 52 78.8
Ciclev10029401m.g Citrus clementina HOM05D007618 ORTHO05D009606 1.0e-17 93.2 52 78.8
Lj1g0004638 Lotus japonicus HOM05D007618 ORTHO05D009606 1.0e-17 93.2 52 78.8
SGA_v2.0_scaffold32G13341 Striga asiatica HOM05D007618 ORTHO05D009606 1.0e-17 93.2 53 79.2
Manes.04G067600 Manihot esculenta HOM05D007618 ORTHO05D009606 1.4e-17 92.8 52 78.8
Solyc01g112170.3 Solanum lycopersicum HOM05D007618 ORTHO05D009606 1.4e-17 92.8 52 80.8
Sopen01g054220 Solanum pennellii HOM05D007618 ORTHO05D009606 1.4e-17 92.8 52 80.8
COL.COLO4_26755 Corchorus olitorius HOM05D007618 ORTHO05D009606 1.8e-17 92.4 60 68.3
Sabra09G0129500 Salix brachista HOM05D007618 ORTHO05D009606 1.8e-17 92.4 53 77.4
Nitab4.5_0000783g0170 Nicotiana tabacum HOM05D007618 ORTHO05D009606 2.3e-17 92.0 51 82.4
MD10G1139000 Malus domestica HOM05D007618 ORTHO05D009606 3.0e-17 91.7 52 78.8
Nn6g31724 Nelumbo nucifera HOM05D007618 ORTHO05D009606 3.0e-17 91.7 52 76.9
Thecc.06G045200 Theobroma cacao HOM05D007618 ORTHO05D009606 3.0e-17 91.7 52 76.9
GSVIVG01023981001 Vitis vinifera HOM05D007618 ORTHO05D009606 3.0e-17 91.7 52 76.9
Potri.004G204700 Populus trichocarpa HOM05D007618 ORTHO05D009606 4.0e-17 91.3 52 76.9
Sed0023624 Sechium edule HOM05D007618 ORTHO05D009606 4.0e-17 91.3 52 78.8
FAN15G3577 Fragaria x ananassa HOM05D007618 ORTHO05D009606 5.2e-17 90.9 53 79.2
CsaV3_6G010180 Cucumis sativus L. HOM05D007618 ORTHO05D009606 6.8e-17 90.5 52 76.9
PGR142G1310 Punica granatum HOM05D007618 ORTHO05D009606 6.8e-17 90.5 52 75.0
MELO3C013504.2 Cucumis melo HOM05D007618 ORTHO05D009606 8.8e-17 90.1 52 76.9
Gohir.A10G000200 Gossypium hirsutum HOM05D002478 ORTHO05D003331 8.8e-17 90.1 55 72.7
Gohir.D10G000400 Gossypium hirsutum HOM05D007618 ORTHO05D009606 8.8e-17 90.1 52 75.0
Gorai.011G000800 Gossypium raimondii HOM05D002478 ORTHO05D003331 8.8e-17 90.1 55 72.7
Potri.009G165700 Populus trichocarpa HOM05D007618 ORTHO05D009606 8.8e-17 90.1 52 76.9
TAR376G0137 Trochodendron aralioides HOM05D007618 ORTHO05D009606 8.8e-17 90.1 52 76.9
CiPaw.05G091300 Carya illinoinensis HOM05D007618 ORTHO05D009606 1.2e-16 89.7 52 76.9
FvH4_2g16570 Fragaria vesca HOM05D007618 ORTHO05D009606 1.2e-16 89.7 52 78.8
FAN27G0591 Fragaria x ananassa HOM05D007618 ORTHO05D009606 1.2e-16 89.7 72 66.7
Glyma.04G001200 Glycine max HOM05D007618 ORTHO05D009606 1.2e-16 89.7 51 76.5
RcHm_v2.0_Chr6g0280641 Rosa chinensis HOM05D007618 ORTHO05D009606 1.2e-16 89.7 52 78.8
Cc09_g10690 Coffea canephora HOM05D007618 ORTHO05D009606 1.5e-16 89.4 52 78.8
Psat5g000560 Pisum sativum HOM05D007618 ORTHO05D009606 2.0e-16 89.0 52 75.0
Duzib235G1428 Durio zibethinus HOM05D007618 ORTHO05D009606 2.6e-16 88.6 52 73.1
HPP92_022157 Vanilla planifolia HOM05D007618 ORTHO05D009606 2.6e-16 88.6 52 75.0
AUR62011704 Chenopodium quinoa HOM05D007618 ORTHO05D009606 3.4e-16 88.2 52 76.9
PSO541G4833 Papaver somniferum HOM05D007618 ORTHO05D009606 3.4e-16 88.2 52 75.0
TAR628G0843 Trochodendron aralioides HOM05D007618 ORTHO05D009606 3.4e-16 88.2 52 75.0
ECA233G4785 Erigeron canadensis HOM05D007618 ORTHO05D009606 5.7e-16 87.4 52 80.8
Eucgr.I01514 Eucalyptus grandis HOM05D007618 ORTHO05D009606 5.7e-16 87.4 52 73.1
Prupe.8G177800 Prunus persica HOM05D007618 ORTHO05D009606 7.5e-16 87.0 52 73.1
Glyma.06G000700 Glycine max HOM05D007618 ORTHO05D009606 1.3e-15 86.3 52 71.2
CANSAT64G2827 Cannabis sativa HOM05D007618 ORTHO05D009606 1.7e-15 85.9 51 72.5
Sabra04G0138200 Salix brachista HOM05D007618 ORTHO05D009606 2.2e-15 85.5 50 76.0
Pp3c3_10700 Physcomitrium patens HOM05D007618 ORTHO05D009606 6.3e-15 84.0 57 61.4
arahy.Tifrunner.gnm1.ann1.DQ7S7B Arachis hypogaea HOM05D007618 ORTHO05D009606 7.0e-14 80.5 48 77.1
CDE05G0820 Ceratophyllum demersum HOM05D007618 ORTHO05D009606 1.2e-13 79.7 51 70.6
arahy.Tifrunner.gnm1.ann1.ZSY7EJ Arachis hypogaea HOM05D007618 ORTHO05D009606 1.6e-13 79.3 56 69.6
PSO675G2292 Papaver somniferum HOM05D007618 ORTHO05D009606 1.6e-13 79.3 52 71.2
MBI08_g32524_MAGBIO Magnolia biondii HOM05D007618 ORTHO05D009606 2.7e-13 78.6 46 76.1
Mapoly0032s0019 Marchantia polymorpha HOM05D007618 ORTHO05D009606 3.5e-13 78.2 57 59.6
vmacro02327 Vaccinium macrocarpon HOM05D007618 ORTHO05D009606 1.9e-11 72.4 107 43.0
Peaxi162Scf00362g00251 Petunia axillaris HOM05D007618 ORTHO05D009606 4.2e-11 71.2 43 74.4
SEGI_37348 Sequoiadendron giganteum HOM05D007618 ORTHO05D009606 5.5e-11 70.9 52 59.6
Cfa005346 Carpinus fangiana HOM05D007618 ORTHO05D009606 1.2e-10 69.7 40 77.5
Nitab4.5_0011212g0030 Nicotiana tabacum HOM05D007618 ORTHO05D009606 1.2e-10 69.7 43 72.1
Lsat_1_v5_gn_8_120421 Lactuca sativa HOM05D007618 ORTHO05D009606 6.1e-10 67.4 57 57.9
Sc18g0005980 Simmondsia chinensis HOM05D007618 ORTHO05D009606 1.2e-08 63.2 39 74.4
CBR_g37948 Chara braunii HOM05D007618 ORTHO05D009606 9.8e-08 60.1 56 46.4
CBR_g30676 Chara braunii HOM05D007618 ORTHO05D009606 2.2e-07 58.9 52 46.2
SMO367G1105 Selaginella moellendorffii HOM05D007618 ORTHO05D009606 2.2e-07 58.9 38 60.5
Cre03.g200050 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 9.2e-06 53.5 56 37.5


User provided reference genes

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