Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006113.1 Olea europaea HOM05D006558 ORTHO05D008424 0.0e+00 1494.6 751 100.0
SGA_v2.0_scaffold232G43518 Striga asiatica HOM05D006558 ORTHO05D008424 2.2e-236 822.8 700 60.4
TAR633G1807 Trochodendron aralioides HOM05D006558 ORTHO05D008424 4.0e-222 775.4 709 57.5
Cc07_g20890 Coffea canephora HOM05D006558 ORTHO05D008424 4.1e-219 765.4 706 55.5
Sopen03g028230 Solanum pennellii HOM05D006558 ORTHO05D008424 6.6e-217 758.1 698 55.6
Actinidia06260 Actinidia chinensis HOM05D006558 ORTHO05D008424 1.1e-216 757.3 702 58.0
QL04p014186 Quercus lobata HOM05D006558 ORTHO05D008424 2.5e-216 756.1 702 55.0
Solyc03g097460.3 Solanum lycopersicum HOM05D006558 ORTHO05D008424 1.2e-215 753.8 698 55.4
Peaxi162Scf00516g00328 Petunia axillaris HOM05D006558 ORTHO05D008424 2.1e-215 753.1 692 56.2
TWI15G0624 Tripterygium wilfordii HOM05D006558 ORTHO05D008424 6.2e-215 751.5 707 54.7
Prupe.2G031500 Prunus persica HOM05D006558 ORTHO05D008424 7.5e-213 744.6 705 55.0
Gohir.D06G185500 Gossypium hirsutum HOM05D006558 ORTHO05D008424 5.4e-211 738.4 700 54.6
Gorai.010G217100 Gossypium raimondii HOM05D006558 ORTHO05D008424 9.2e-211 737.6 700 55.0
CiPaw.13G011700 Carya illinoinensis HOM05D006558 ORTHO05D008424 3.0e-209 732.6 701 54.9
CAN.G732.14 Capsicum annuum HOM05D006558 ORTHO05D008424 3.6e-207 725.7 701 53.8
Manes.12G022900 Manihot esculenta HOM05D006558 ORTHO05D008424 3.6e-207 725.7 703 52.3
RcHm_v2.0_Chr1g0321321 Rosa chinensis HOM05D006558 ORTHO05D008424 4.7e-207 725.3 705 55.0
GSVIVG01000827001 Vitis vinifera HOM05D006558 ORTHO05D008424 2.3e-206 723.0 697 55.4
Duzib106G1800 Durio zibethinus HOM05D006558 ORTHO05D008424 9.9e-205 717.6 675 54.1
FvH4_7g02620 Fragaria vesca HOM05D006558 ORTHO05D008424 5.4e-203 711.8 704 53.4
Rhsim07G0065000 Rhododendron simsii HOM05D006558 ORTHO05D008424 1.6e-202 710.3 760 51.8
Nitab4.5_0002530g0080 Nicotiana tabacum HOM05D006558 ORTHO05D008424 6.0e-202 708.4 699 53.9
Ciclev10033512m.g Citrus clementina HOM05D006558 ORTHO05D008424 1.3e-201 707.2 696 53.3
Nn7g37154 Nelumbo nucifera HOM05D006558 ORTHO05D008424 3.9e-201 705.7 712 52.1
FAN01G2130 Fragaria x ananassa HOM05D006558 ORTHO05D008424 4.3e-200 702.2 719 52.6
FAN03G0498 Fragaria x ananassa HOM05D006558 ORTHO05D008424 2.1e-199 699.9 719 52.3
Phvul.002G285400 Phaseolus vulgaris HOM05D006558 ORTHO05D008424 2.4e-198 696.4 698 52.7
Ca_25408_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 1.2e-197 694.1 688 53.6
Aqoxy2G03825 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 7.6e-197 691.4 707 51.8
CANSAT78G0292 Cannabis sativa HOM05D006558 ORTHO05D008424 2.2e-196 689.9 689 52.5
CANSAT78G2064 Cannabis sativa HOM05D006558 ORTHO05D008424 1.4e-195 687.2 689 52.7
Psat5g217480 Pisum sativum HOM05D006558 ORTHO05D008424 4.2e-195 685.6 697 52.7
Potri.004G236000 Populus trichocarpa HOM05D006558 ORTHO05D008424 5.4e-195 685.3 698 52.3
Sc11g0006630 Simmondsia chinensis HOM05D006558 ORTHO05D008424 5.4e-195 685.3 693 51.9
Lj3g0026268 Lotus japonicus HOM05D006558 ORTHO05D008424 9.3e-195 684.5 702 53.1
Nitab4.5_0000021g1060 Nicotiana tabacum HOM05D006558 ORTHO05D008424 1.6e-194 683.7 735 50.1
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 4.6e-194 682.2 692 52.0
Aqoxy5G01848 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 1.0e-193 681.0 703 51.9
VMungo0251G1905 Vigna mungo HOM05D006558 ORTHO05D008424 1.3e-193 680.6 700 51.7
MELO3C016629.2 Cucumis melo HOM05D006558 ORTHO05D008424 2.3e-193 679.9 696 50.9
Glyma.11G153500 Glycine max HOM05D006558 ORTHO05D008424 3.0e-193 679.5 699 52.6
CsaV3_5G011280 Cucumis sativus L. HOM05D006558 ORTHO05D008424 5.1e-193 678.7 698 50.6
Lj9C648T3 Lonicera japonica HOM05D006558 ORTHO05D008424 5.1e-193 678.7 672 53.4
HanXRQChr02g0050141 Helianthus annuus HOM05D006558 ORTHO05D008424 3.6e-191 672.5 696 50.1
AUR62037214 Chenopodium quinoa HOM05D006558 ORTHO05D008424 1.4e-190 670.6 688 51.5
MBI13_g29518_MAGBIO Magnolia biondii HOM05D006558 ORTHO05D008424 4.0e-190 669.1 711 50.5
ECA248G1764 Erigeron canadensis HOM05D006558 ORTHO05D008424 6.9e-190 668.3 701 49.6
Lalb_Chr25g0282291 Lupinus albus HOM05D006558 ORTHO05D008424 4.4e-189 665.6 692 51.3
AUR62026839 Chenopodium quinoa HOM05D006558 ORTHO05D008424 1.3e-188 664.1 688 51.3
EL10Ac2g02834 Beta vulgaris HOM05D006558 ORTHO05D009340 3.9e-185 652.5 694 50.4
Sed0005595 Sechium edule HOM05D006558 ORTHO05D008424 1.3e-183 647.5 692 48.4
PGR031G1286 Punica granatum HOM05D006558 ORTHO05D008424 4.5e-181 639.0 701 49.2
Dinv00935 Davidia involucrata HOM05D006558 ORTHO05D008424 1.4e-179 634.0 588 57.8
Migut.K00935 Erythranthe guttata HOM05D006558 ORTHO05D008424 5.5e-179 632.1 611 56.8
Sp3g06440 Schrenkiella parvula HOM05D006558 ORTHO05D008424 1.6e-178 630.6 704 47.2
AL3G18860 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 6.0e-178 628.6 701 47.1
Ca_25460_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 1.3e-177 627.5 630 54.1
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 1.1e-176 624.4 710 47.5
AT3G07530 Arabidopsis thaliana HOM05D006558 ORTHO05D008424 1.3e-175 620.9 701 46.4
THA.LOC104826716 Tarenaya hassleriana HOM05D006558 ORTHO05D008424 1.6e-175 620.5 705 47.9
DCAR_010372 Daucus carota HOM05D006558 ORTHO05D008424 8.1e-175 618.2 510 58.8
Thhalv10020176m.g Eutrema salsugineum HOM05D006558 ORTHO05D008424 2.0e-173 613.6 704 46.4
Lsat_1_v5_gn_1_114420 Lactuca sativa HOM05D006558 ORTHO05D008424 6.0e-170 602.1 697 47.3
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea HOM05D006558 ORTHO05D008424 1.3e-169 600.9 670 48.1
Aa31LG10G8390 Aethionema arabicum HOM05D006558 ORTHO05D008424 2.3e-169 600.1 701 46.4
Haze_03062 Corylus avellana HOM05D006558 ORTHO05D008424 3.0e-169 599.7 610 52.3
BraA05t22799Z Brassica rapa HOM05D006558 ORTHO05D008424 7.4e-168 595.1 721 45.4
Carub.0003s0708 Capsella rubella HOM05D006558 ORTHO05D008424 8.2e-167 591.7 706 45.3
BolC5t34633H Brassica oleracea HOM05D006558 ORTHO05D008424 5.8e-165 585.5 714 45.0
C05p59790 Brassica napus HOM05D006558 ORTHO05D008424 5.5e-163 578.9 684 45.9
Psat5g217880 Pisum sativum HOM05D006558 ORTHO05D008424 9.3e-163 578.2 506 57.7
A05p40680 Brassica napus HOM05D006558 ORTHO05D008424 7.9e-162 575.1 684 45.8
PSO675G8563 Papaver somniferum HOM05D006558 ORTHO05D008424 3.0e-161 573.2 708 45.8
BcaC05g29545 Brassica carinata HOM05D006558 ORTHO05D008424 3.9e-161 572.8 692 45.1
Ah.10g030940 Amaranthus hybridus HOM05D006558 ORTHO05D008424 4.8e-159 565.8 599 50.1
unitig_32.g11142 Utricularia gibba HOM05D006558 ORTHO05D008424 1.0e-156 558.1 625 48.5
HPP92_012099 Vanilla planifolia HOM05D006558 ORTHO05D008424 6.5e-156 555.4 707 43.4
Dinv09252 Davidia involucrata HOM05D006558 ORTHO05D008424 1.7e-151 540.8 535 55.0
Atru.chr11.2434 Acer truncatum HOM05D006558 ORTHO05D008424 1.1e-150 538.1 451 58.3
CARHR082190 Cardamine hirsuta HOM05D006558 ORTHO05D008424 3.8e-148 529.6 513 52.2
PGSC0003DMG400031735 Solanum tuberosum HOM05D006558 ORTHO05D008424 3.0e-145 520.0 493 54.0
MD00G1214500 Malus domestica HOM05D006558 ORTHO05D008424 5.2e-137 492.7 396 60.4
Cpa.g.sc96.50 Carica papaya HOM05D006558 ORTHO05D008424 3.3e-136 490.0 443 55.5
Thecc.10G170400 Theobroma cacao HOM05D006558 ORTHO05D008424 6.3e-135 485.7 442 55.2
arahy.Tifrunner.gnm1.ann1.S73JQ5 Arachis hypogaea HOM05D006558 ORTHO05D008424 4.1e-134 483.0 549 46.8
vmacro13739 Vaccinium macrocarpon HOM05D006558 ORTHO05D008424 8.8e-129 465.3 469 53.5
Sabra01G0180400 Salix brachista HOM05D006558 ORTHO05D008424 1.1e-126 458.4 447 53.9
Medtr3g019010 Medicago truncatula HOM05D006558 ORTHO05D008424 2.9e-124 450.3 533 47.7
Hund15718 Selenicereus undatus HOM05D006558 ORTHO05D008424 1.9e-123 447.6 638 42.6
Gohir.A06G175900 Gossypium hirsutum HOM05D006558 ORTHO05D008424 2.6e-112 410.6 434 49.8
ATR1093G023 Amborella trichopoda HOM05D006558 ORTHO05D008424 2.4e-110 404.1 544 42.8
CDE05G1491 Ceratophyllum demersum HOM05D006558 ORTHO05D008424 3.9e-108 396.7 662 38.4
Zm00001eb143980 Zea mays HOM05D006558 ORTHO05D008424 7.5e-96 355.9 494 41.3
AL908U10010 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 4.7e-90 336.7 372 47.3
AagrBONN_evm.TU.Sc2ySwM_228.965 Anthoceros agrestis HOM05D006558 ORTHO05D008424 1.0e-84 318.9 769 29.5
Mapoly0001s0524 Marchantia polymorpha HOM05D006558 ORTHO05D008424 2.3e-84 317.8 843 29.5
SMO229G0006 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 2.5e-83 314.3 710 30.8
SMO144G0043 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 7.3e-83 312.8 710 30.7
COL.COLO4_35437 Corchorus olitorius HOM05D006558 ORTHO05D008424 2.7e-77 294.3 585 33.3
Gohir.A06G175902 Gossypium hirsutum HOM05D006558 ORTHO05D008424 2.7e-77 294.3 235 63.0
Pp3c9_4730 Physcomitrium patens HOM05D006558 ORTHO05D008424 6.6e-76 289.7 827 27.6
SEGI_06522 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 1.3e-71 275.4 366 44.8
Eucgr.H05132 Eucalyptus grandis HOM05D006558 ORTHO05D008424 1.9e-70 271.6 688 30.4
MD07G1035100 Malus domestica HOM05D006558 ORTHO05D008424 2.1e-61 241.5 225 55.1
Atru.chr11.2476 Acer truncatum HOM05D006558 ORTHO05D008424 1.0e-60 239.2 183 63.4
Eucgr.H05138 Eucalyptus grandis HOM05D006558 ORTHO05D008424 1.7e-47 195.3 319 37.6
SEGI_00327 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 1.3e-39 169.1 160 50.6
Cc02_g29630 Coffea canephora HOM05D006558 ORTHO05D008424 2.9e-39 167.9 127 62.2
Cpa.g.sc96.48 Carica papaya HOM05D006558 ORTHO05D008424 1.2e-37 162.5 218 44.0
Eucgr.H05129 Eucalyptus grandis HOM05D006558 ORTHO05D008424 6.3e-34 150.2 146 51.4
CBR_g72661 Chara braunii HOM05D000019 ORTHO05D000353 4.1e-33 147.5 305 32.1
Atru.chr11.2433 Acer truncatum HOM05D006558 ORTHO05D008424 4.5e-32 144.1 145 54.5
SGA_v2.0_scaffold2G00943 Striga asiatica HOM05D006558 ORTHO05D008424 7.7e-32 143.3 234 41.0
Medtr3g019025 Medicago truncatula HOM05D006558 ORTHO05D008424 8.8e-28 129.8 89 69.7
DCAR_010374 Daucus carota HOM05D006558 ORTHO05D008424 1.1e-27 129.4 189 40.2
Os03g0243200 Oryza sativa ssp. japonica HOM05D006558 ORTHO05D008424 5.7e-27 127.1 205 39.0
SEGI_36037 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 6.7e-20 103.6 247 29.6
MD00G1214400 Malus domestica HOM05D006558 ORTHO05D008424 1.2e-19 102.8 126 44.4
Ca_02010_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 3.2e-14 84.7 59 67.8
MD07G1035200 Malus domestica HOM05D006558 ORTHO05D008424 2.7e-13 81.6 133 39.8
CAN.G261.15 Capsicum annuum HOM05D003152 ORTHO05D034019 9.8e-11 73.2 77 48.1
Medtr3g019030 Medicago truncatula HOM05D006558 ORTHO05D034019 2.2e-10 72.0 40 70.0
Nn7g37167 Nelumbo nucifera HOM05D006558 ORTHO05D008424 1.2e-08 66.2 47 59.6
MBI08_g18916_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 7.7e-08 63.5 72 47.2
Rhsim12G0031700 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.9e-07 61.6 47 63.8
Sopen05g017900 Solanum pennellii HOM05D028470 ORTHO05D037706 8.6e-07 60.1 87 37.9
SalBow2G1087 Salvia bowleyana HOM05D002159 ORTHO05D005625 4.2e-06 57.8 290 22.4
Solyc05g150129.1 Solanum lycopersicum HOM05D006558 ORTHO05D008424 7.2e-06 57.0 62 43.5
HPP92_025733 Vanilla planifolia HOM05D002159 ORTHO05D005625 9.5e-06 56.6 192 26.0


User provided reference genes

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