Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005926.1 Olea europaea HOM05D002949 ORTHO05D003151 2.5e-56 221.9 109 100.0
Oeu059554.1 Olea europaea HOM05D002949 ORTHO05D003151 3.9e-46 188.0 96 97.9
Oeu030053.1 Olea europaea HOM05D002949 ORTHO05D003151 5.2e-46 187.6 117 83.8
Oeu043690.1 Olea europaea HOM05D002949 ORTHO05D003151 1.4e-38 162.9 103 82.5
Oeu051329.1 Olea europaea HOM05D002949 ORTHO05D003151 1.8e-38 162.5 104 82.7
Oeu059547.2 Olea europaea HOM05D002949 ORTHO05D003151 1.8e-38 162.5 104 82.7
Oeu014708.1 Olea europaea HOM05D002949 ORTHO05D003151 1.6e-34 149.4 104 74.0
Oeu043681.1 Olea europaea HOM05D002949 ORTHO05D003151 3.2e-32 141.7 96 80.2
Migut.M01213 Erythranthe guttata HOM05D002949 ORTHO05D003151 8.0e-23 110.5 119 48.7
MSTRG.7290 Avicennia marina HOM05D002949 ORTHO05D003151 5.2e-22 107.8 116 51.7
SGA_v2.0_scaffold739G53543 Striga asiatica HOM05D002949 ORTHO05D003151 1.7e-20 102.8 108 53.7
MSTRG.15935 Avicennia marina HOM05D002949 ORTHO05D003151 2.8e-20 102.1 116 48.3
MSTRG.13182 Avicennia marina HOM05D002949 ORTHO05D003151 6.3e-20 100.9 106 50.0
Cc02_g12440 Coffea canephora HOM05D002949 ORTHO05D003151 7.0e-19 97.4 106 57.5
SGA_v2.0_scaffold114G31981 Striga asiatica HOM05D002949 ORTHO05D003151 3.5e-18 95.1 117 46.2
Lj2A279T59 Lonicera japonica HOM05D002949 ORTHO05D003151 2.3e-17 92.4 105 52.4
SalBow8G4484 Salvia bowleyana HOM05D002949 ORTHO05D003151 1.9e-16 89.4 94 53.2
Solyc10g005480.3 Solanum lycopersicum HOM05D002949 ORTHO05D003151 3.6e-15 85.1 105 52.4
Sopen10g001460 Solanum pennellii HOM05D002949 ORTHO05D003151 3.6e-15 85.1 105 52.4
PGSC0003DMG400011249 Solanum tuberosum HOM05D002949 ORTHO05D003151 8.0e-15 84.0 105 51.4
Nitab4.5_0005936g0030 Nicotiana tabacum HOM05D002949 ORTHO05D003151 1.4e-14 83.2 118 46.6
Peaxi162Scf00083g00012 Petunia axillaris HOM05D002949 ORTHO05D003151 4.0e-14 81.6 104 51.9
CSS0042931 Camellia sinensis var. sinensis HOM05D002949 ORTHO05D003151 5.2e-14 81.3 106 50.0
Hma1.2p1_1182F.1_g264820 Hydrangea macrophylla HOM05D002949 ORTHO05D003151 8.9e-14 80.5 107 48.6
Nitab4.5_0002222g0070 Nicotiana tabacum HOM05D002949 ORTHO05D003151 1.2e-13 80.1 118 44.9
CAN.G289.27 Capsicum annuum HOM05D002949 ORTHO05D003151 1.5e-13 79.7 104 46.2
unitig_21.g20225 Utricularia gibba HOM05D002949 ORTHO05D003151 1.5e-13 79.7 101 44.6
Oeu002243.1 Olea europaea HOM05D002949 ORTHO05D003151 2.6e-13 79.0 117 42.7
Cpa.g.sc2820.1 Carica papaya HOM05D002949 ORTHO05D003151 4.4e-13 78.2 122 39.3
Nitab4.5_0009994g0030 Nicotiana tabacum HOM05D002949 ORTHO05D003151 5.8e-13 77.8 105 46.7
CAN.G132.15 Capsicum annuum HOM05D002949 ORTHO05D003151 9.8e-13 77.0 105 48.6
CSS0030314 Camellia sinensis var. sinensis HOM05D002949 ORTHO05D003151 1.7e-12 76.3 104 49.0
Nitab4.5_0000190g0100 Nicotiana tabacum HOM05D002949 ORTHO05D003151 4.9e-12 74.7 105 45.7
Potri.004G034400 Populus trichocarpa HOM05D002949 ORTHO05D003151 6.4e-12 74.3 124 39.5
Sabra04G0020200 Salix brachista HOM05D002949 ORTHO05D003151 6.4e-12 74.3 124 37.9
QL04p018313 Quercus lobata HOM05D002949 ORTHO05D003151 8.3e-12 73.9 110 46.4
DCAR_028132 Daucus carota HOM05D002949 ORTHO05D003151 1.1e-11 73.6 98 51.0
Nitab4.5_0003465g0090 Nicotiana tabacum HOM05D002949 ORTHO05D003151 1.1e-11 73.6 101 44.6
Ciclev10016832m.g Citrus clementina HOM05D002949 ORTHO05D003151 1.4e-11 73.2 124 39.5
Rhsim13G0169900 Rhododendron simsii HOM05D002949 ORTHO05D003151 1.4e-11 73.2 108 45.4
PGSC0003DMG400022356 Solanum tuberosum HOM05D002949 ORTHO05D003151 1.9e-11 72.8 97 45.4
Solyc03g006640.3 Solanum lycopersicum HOM05D002949 ORTHO05D003151 2.4e-11 72.4 104 41.3
PGSC0003DMG400005038 Solanum tuberosum HOM05D002949 ORTHO05D003151 2.4e-11 72.4 104 41.3
DCAR_004138 Daucus carota HOM05D002949 ORTHO05D003151 7.0e-11 70.9 95 52.6
Solyc02g079150.2 Solanum lycopersicum HOM05D002949 ORTHO05D003151 7.0e-11 70.9 96 43.8
Sopen02g023950 Solanum pennellii HOM05D002949 ORTHO05D003151 7.0e-11 70.9 96 43.8
vmacro03809 Vaccinium macrocarpon HOM05D002949 ORTHO05D003151 7.0e-11 70.9 117 43.6
Manes.16G020700 Manihot esculenta HOM05D002949 ORTHO05D003151 9.2e-11 70.5 108 40.7
Nitab4.5_0012269g0020 Nicotiana tabacum HOM05D002949 ORTHO05D003151 9.2e-11 70.5 101 43.6
Sopen03g002650 Solanum pennellii HOM05D002949 ORTHO05D003151 1.2e-10 70.1 104 40.4
CAN.G424.14 Capsicum annuum HOM05D002949 ORTHO05D003151 1.6e-10 69.7 104 44.2
CsaV3_6G049750 Cucumis sativus L. HOM05D002949 ORTHO05D003151 1.6e-10 69.7 122 40.2
vmacro15865 Vaccinium macrocarpon HOM05D002949 ORTHO05D003151 1.6e-10 69.7 105 41.0
FAN21G3300 Fragaria x ananassa HOM05D002949 ORTHO05D003151 2.0e-10 69.3 105 38.1
FAN25G2238 Fragaria x ananassa HOM05D002949 ORTHO05D003151 2.0e-10 69.3 105 38.1
PGR042G1480 Punica granatum HOM05D002949 ORTHO05D003151 2.7e-10 68.9 104 44.2
MELO3C007321.2 Cucumis melo HOM05D002949 ORTHO05D003151 3.5e-10 68.6 122 40.2
Potri.011G042800 Populus trichocarpa HOM05D002949 ORTHO05D003151 3.5e-10 68.6 123 39.8
CARHR252520 Cardamine hirsuta HOM05D002949 ORTHO05D003151 6.0e-10 67.8 96 46.9
Sabra11G0029400 Salix brachista HOM05D002949 ORTHO05D003151 6.0e-10 67.8 123 40.7
Atru.chr10.2010 Acer truncatum HOM05D002949 ORTHO05D003151 1.0e-09 67.0 106 41.5
Actinidia26996 Actinidia chinensis HOM05D002949 ORTHO05D003151 1.0e-09 67.0 106 42.5
Cfa000353 Carpinus fangiana HOM05D002949 ORTHO05D003151 1.0e-09 67.0 112 43.8
CiPaw.09G158000 Carya illinoinensis HOM05D002949 ORTHO05D003151 1.0e-09 67.0 123 40.7
Rhsim02G0119700 Rhododendron simsii HOM05D002949 ORTHO05D003151 1.0e-09 67.0 118 38.1
Actinidia24059 Actinidia chinensis HOM05D002949 ORTHO05D003151 1.3e-09 66.6 106 46.2
PGR004G0173 Punica granatum HOM05D002949 ORTHO05D003151 1.7e-09 66.2 102 43.1
RcHm_v2.0_Chr5g0006321 Rosa chinensis HOM05D002949 ORTHO05D003151 1.7e-09 66.2 105 36.2
FAN11G3871 Fragaria x ananassa HOM05D002949 ORTHO05D003151 2.3e-09 65.9 108 38.9
TWI63G1783 Tripterygium wilfordii HOM05D002949 ORTHO05D003151 2.3e-09 65.9 109 44.0
ClCG00G005360 Citrullus lanatus HOM05D002949 ORTHO05D003151 3.0e-09 65.5 122 38.5
ClCG01G022560 Citrullus lanatus HOM05D002949 ORTHO05D003151 3.0e-09 65.5 122 38.5
TWI38G1709 Tripterygium wilfordii HOM05D002949 ORTHO05D003151 3.0e-09 65.5 114 41.2
TAR626G0808 Trochodendron aralioides HOM05D002949 ORTHO05D003151 3.0e-09 65.5 116 38.8
unitig_744.g24531 Utricularia gibba HOM05D002949 ORTHO05D003151 3.9e-09 65.1 102 42.2
FvH4_3g04020 Fragaria vesca HOM05D002949 ORTHO05D003151 5.0e-09 64.7 108 38.0
Gorai.011G022800 Gossypium raimondii HOM05D002949 ORTHO05D003151 5.0e-09 64.7 105 41.0
Lsat_1_v5_gn_4_57061 Lactuca sativa HOM05D002949 ORTHO05D003151 5.0e-09 64.7 98 41.8
BcaC04g21365 Brassica carinata HOM05D002949 ORTHO05D003151 6.6e-09 64.3 86 45.3
C09p32680 Brassica napus HOM05D002949 ORTHO05D003151 6.6e-09 64.3 86 45.3
Gohir.A10G020900 Gossypium hirsutum HOM05D002949 ORTHO05D003151 6.6e-09 64.3 105 41.0
Sed0028194 Sechium edule HOM05D002949 ORTHO05D003151 6.6e-09 64.3 111 40.5
A09p25790 Brassica napus HOM05D002949 ORTHO05D003151 8.6e-09 63.9 86 45.3
BolC9t56113H Brassica oleracea HOM05D002949 ORTHO05D003151 8.6e-09 63.9 86 45.3
BraA09t38149Z Brassica rapa HOM05D002949 ORTHO05D003151 8.6e-09 63.9 86 45.3
Gohir.D10G021700 Gossypium hirsutum HOM05D002949 ORTHO05D003151 8.6e-09 63.9 105 41.0
Prupe.4G036800 Prunus persica HOM05D002949 ORTHO05D003151 8.6e-09 63.9 110 40.9
HanXRQChr16g0517451 Helianthus annuus HOM05D002949 ORTHO05D003151 1.5e-08 63.2 100 42.0
HanXRQChr05g0131241 Helianthus annuus HOM05D002949 ORTHO05D003151 1.9e-08 62.8 73 49.3
Thecc.06G199500 Theobroma cacao HOM05D002949 ORTHO05D003151 1.9e-08 62.8 110 40.0
Gohir.A09G070900 Gossypium hirsutum HOM05D002949 ORTHO05D003151 3.3e-08 62.0 118 38.1
Duzib192G0121 Durio zibethinus HOM05D002949 ORTHO05D003151 4.3e-08 61.6 101 45.5
Gohir.A05G165700 Gossypium hirsutum HOM05D002949 ORTHO05D003151 4.3e-08 61.6 89 46.1
Lj4g0021109 Lotus japonicus HOM05D002949 ORTHO05D003151 4.3e-08 61.6 97 43.3
THA.LOC104819031 Tarenaya hassleriana HOM05D002949 ORTHO05D003151 4.3e-08 61.6 108 33.3
Gohir.D05G168700 Gossypium hirsutum HOM05D002949 ORTHO05D003151 5.6e-08 61.2 93 44.1
unitig_749.g13642 Utricularia gibba HOM05D002949 ORTHO05D003151 5.6e-08 61.2 83 39.8
ECA236G1522 Erigeron canadensis HOM05D002949 ORTHO05D003151 7.3e-08 60.8 88 40.9
Dinv40479 Davidia involucrata HOM05D002949 ORTHO05D003151 9.5e-08 60.5 56 58.9
Gorai.009G173900 Gossypium raimondii HOM05D002949 ORTHO05D003151 9.5e-08 60.5 93 44.1
AUR62016898 Chenopodium quinoa HOM05D002949 ORTHO05D003151 1.2e-07 60.1 113 36.3
TWI38G1696 Tripterygium wilfordii HOM05D002949 ORTHO05D003151 1.2e-07 60.1 92 46.7
Duzib160G0394 Durio zibethinus HOM05D002949 ORTHO05D003151 1.6e-07 59.7 121 38.0
MD10G1303400 Malus domestica HOM05D002949 ORTHO05D003151 1.6e-07 59.7 119 36.1
AL6G48600 Arabidopsis lyrata HOM05D002949 ORTHO05D003151 2.1e-07 59.3 86 41.9
DCAR_008070 Daucus carota HOM05D002949 ORTHO05D003151 2.1e-07 59.3 83 47.0
Aqoxy1G03877 Aquilegia oxysepala HOM05D002949 ORTHO05D003151 2.8e-07 58.9 51 60.8
MD05G1325400 Malus domestica HOM05D002949 ORTHO05D003151 2.8e-07 58.9 117 36.8
Gorai.006G085400 Gossypium raimondii HOM05D002949 ORTHO05D003151 3.6e-07 58.5 99 39.4
COL.COLO4_31585 Corchorus olitorius HOM05D002949 ORTHO05D003151 4.7e-07 58.2 122 37.7
ECA234G2368 Erigeron canadensis HOM05D002949 ORTHO05D003151 4.7e-07 58.2 97 39.2
Glyma.08G058900 Glycine max HOM05D002949 ORTHO05D003151 4.7e-07 58.2 101 38.6
Carub.0006s3298 Capsella rubella HOM05D002949 ORTHO05D003151 6.2e-07 57.8 90 41.1
PSO675G0167 Papaver somniferum HOM05D002949 ORTHO05D003151 6.2e-07 57.8 96 37.5
MBI02_g06001_MAGBIO Magnolia biondii HOM05D002949 ORTHO05D003151 8.0e-07 57.4 121 34.7
PSO541G5210 Papaver somniferum HOM05D002949 ORTHO05D003151 8.0e-07 57.4 96 37.5
Thhalv10009722m.g Eutrema salsugineum HOM05D002949 ORTHO05D003151 1.4e-06 56.6 90 40.0
Glyma.07G190100 Glycine max HOM05D002949 ORTHO05D003151 1.4e-06 56.6 101 37.6
CARHR011490 Cardamine hirsuta HOM05D002949 ORTHO05D003151 1.8e-06 56.2 69 46.4
VMungo0540G1141 Vigna mungo HOM05D002949 ORTHO05D003151 1.8e-06 56.2 86 41.9
Aa31LG2G9330 Aethionema arabicum HOM05D002949 ORTHO05D003151 2.3e-06 55.8 108 34.3
Gohir.D09G070700 Gossypium hirsutum HOM05D002949 ORTHO05D003151 2.3e-06 55.8 99 38.4
GSVIVG01003193001 Vitis vinifera HOM05D007484 ORTHO05D003151 2.3e-06 55.8 65 46.2
arahy.Tifrunner.gnm1.ann1.72AI1G Arachis hypogaea HOM05D002949 ORTHO05D003151 3.1e-06 55.5 98 38.8
A01p12820 Brassica napus HOM05D002949 ORTHO05D003151 3.1e-06 55.5 95 37.9
BraA01t01226Z Brassica rapa HOM05D002949 ORTHO05D003151 3.1e-06 55.5 95 37.9
Sp6g03930 Schrenkiella parvula HOM05D002949 ORTHO05D003151 3.1e-06 55.5 83 43.4
THA.LOC104806276 Tarenaya hassleriana HOM05D002949 ORTHO05D003151 4.0e-06 55.1 49 51.0
AT4G05010 Arabidopsis thaliana HOM05D002949 ORTHO05D003151 5.2e-06 54.7 86 43.0
Thhalv10029012m.g Eutrema salsugineum HOM05D002949 ORTHO05D003151 5.2e-06 54.7 101 38.6
RcHm_v2.0_Chr2g0138281 Rosa chinensis HOM05D002949 ORTHO05D003151 5.2e-06 54.7 110 34.5
GSVIVG01003188001 Vitis vinifera HOM05D002949 ORTHO05D003151 5.2e-06 54.7 49 53.1
C03p36510 Brassica napus HOM05D002949 ORTHO05D003151 6.8e-06 54.3 93 39.8
Ca_18482_v3 Cicer arietinum L. HOM05D002949 ORTHO05D003151 6.8e-06 54.3 51 51.0
Glyma.13G246200 Glycine max HOM05D002949 ORTHO05D003151 6.8e-06 54.3 76 39.5
TPR.G32423 Trifolium pratense HOM05D002949 ORTHO05D003151 6.8e-06 54.3 91 38.5
VMungo0251G2283 Vigna mungo HOM05D002949 ORTHO05D003151 6.8e-06 54.3 109 33.9
arahy.Tifrunner.gnm1.ann1.CAN000 Arachis hypogaea HOM05D002949 ORTHO05D003151 8.9e-06 53.9 98 37.8
BcaNung02792 Brassica carinata HOM05D002949 ORTHO05D003151 8.9e-06 53.9 95 36.8
BolC1t01498H Brassica oleracea HOM05D002949 ORTHO05D003151 8.9e-06 53.9 95 36.8
Phvul.006G192100 Phaseolus vulgaris HOM05D002949 ORTHO05D003151 8.9e-06 53.9 86 39.5
Thecc.01G013900 Theobroma cacao HOM05D004861 ORTHO05D001964 8.9e-06 53.9 110 32.7


User provided reference genes

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