Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 9.3e-95 350.1 169 100.0
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 8.2e-75 283.9 170 83.5
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 7.5e-52 207.6 179 60.9
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 5.9e-49 198.0 178 59.0
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 7.2e-47 191.0 176 59.7
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 1.2e-46 190.3 174 58.6
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 8.0e-46 187.6 186 57.0
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 8.0e-46 187.6 185 56.8
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 5.2e-45 184.9 178 56.2
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 2.0e-44 183.0 170 60.6
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 7.5e-44 181.0 170 54.1
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 6.3e-43 177.9 174 55.7
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 1.8e-42 176.4 175 58.3
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 7.0e-42 174.5 170 55.3
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 3.5e-41 172.2 174 54.6
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 1.7e-40 169.9 171 55.0
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 1.7e-40 169.9 179 54.2
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 2.3e-40 169.5 169 56.2
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 2.9e-40 169.1 170 54.1
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 8.6e-40 167.5 171 54.4
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 1.9e-39 166.4 173 56.1
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 3.3e-39 165.6 168 51.2
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 7.2e-39 164.5 177 54.8
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 7.2e-39 164.5 177 50.8
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 7.2e-39 164.5 174 55.2
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 2.8e-38 162.5 171 53.8
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 4.7e-38 161.8 161 55.9
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 4.7e-38 161.8 160 55.6
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.0e-37 160.6 170 55.3
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 4.0e-37 158.7 165 52.1
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 6.8e-37 157.9 174 52.3
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 8.9e-37 157.5 174 54.0
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 1.5e-36 156.8 169 52.7
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 1.5e-36 156.8 176 54.0
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 2.6e-36 156.0 176 52.8
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 5.7e-36 154.8 175 53.1
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.5e-36 154.5 171 50.9
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 1.7e-35 153.3 176 51.1
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 2.2e-35 152.9 176 47.2
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 2.8e-35 152.5 179 48.6
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 2.8e-35 152.5 169 52.1
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 1.1e-34 150.6 179 49.7
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 1.4e-34 150.2 176 51.1
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 1.4e-34 150.2 177 52.0
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.8e-34 149.8 171 49.7
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 1.8e-34 149.8 174 50.0
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 1.8e-34 149.8 172 49.4
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.8e-34 149.8 171 50.9
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 2.4e-34 149.4 174 50.0
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 1.2e-33 147.1 169 46.2
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 2.0e-33 146.4 177 45.2
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 2.0e-33 146.4 171 49.7
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 3.5e-33 145.6 173 49.7
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 4.5e-33 145.2 164 48.2
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 4.5e-33 145.2 166 48.8
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 4.5e-33 145.2 177 49.7
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 5.9e-33 144.8 175 49.7
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 7.8e-33 144.4 169 47.3
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 7.8e-33 144.4 177 46.3
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 1.0e-32 144.1 178 46.6
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 1.3e-32 143.7 168 48.2
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 1.7e-32 143.3 164 50.0
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 1.7e-32 143.3 168 45.2
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 1.7e-32 143.3 172 48.3
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 2.3e-32 142.9 179 49.2
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 5.0e-32 141.7 177 46.3
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 6.6e-32 141.4 160 49.4
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.1e-31 140.6 180 47.2
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 1.9e-31 139.8 189 44.4
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 3.3e-31 139.0 191 47.1
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 4.3e-31 138.7 181 48.1
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 7.3e-31 137.9 170 47.6
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 9.5e-31 137.5 171 46.2
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 1.6e-30 136.7 166 49.4
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 2.1e-30 136.3 150 53.3
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 2.8e-30 136.0 168 46.4
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 2.8e-30 136.0 181 47.0
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.6e-30 135.6 166 47.0
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 6.1e-30 134.8 199 45.7
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 6.1e-30 134.8 170 45.3
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 1.0e-29 134.0 178 48.3
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 1.8e-29 133.3 173 48.6
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 3.1e-29 132.5 172 47.1
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 4.0e-29 132.1 172 44.8
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 1.5e-28 130.2 170 47.1
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 2.0e-28 129.8 185 45.4
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 3.4e-28 129.0 278 33.1
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 5.8e-28 128.3 171 44.4
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.8e-28 128.3 168 46.4
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 5.8e-28 128.3 175 44.6
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.7e-27 126.7 172 45.3
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 2.2e-27 126.3 179 43.6
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 3.7e-27 125.6 172 44.8
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 6.4e-27 124.8 166 45.8
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 6.4e-27 124.8 173 43.4
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 8.3e-27 124.4 176 43.2
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 1.9e-26 123.2 172 43.0
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 1.9e-26 123.2 172 43.0
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 4.1e-26 122.1 172 43.6
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 5.4e-26 121.7 178 39.9
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.4e-26 121.7 169 45.6
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 9.2e-26 120.9 172 43.0
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 9.2e-26 120.9 174 43.1
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 1.6e-25 120.2 178 39.3
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.0e-25 119.8 178 45.5
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 3.5e-25 119.0 171 44.4
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 4.6e-25 118.6 182 40.7
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 4.6e-25 118.6 182 40.7
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 6.0e-25 118.2 172 43.0
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 6.0e-25 118.2 172 43.0
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 7.8e-25 117.9 162 44.4
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 1.0e-24 117.5 181 40.3
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.0e-24 117.5 176 41.5
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.7e-24 116.7 171 41.5
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 2.3e-24 116.3 173 46.2
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 3.9e-24 115.5 190 37.4
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 3.9e-24 115.5 178 38.8
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 5.0e-24 115.2 173 42.2
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.6e-24 114.8 168 44.6
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 1.9e-23 113.2 178 40.4
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 1.9e-23 113.2 162 43.2
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 2.5e-23 112.8 177 42.9
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 2.5e-23 112.8 179 41.3
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 4.3e-23 112.1 170 42.9
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 5.6e-23 111.7 184 38.6
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 5.6e-23 111.7 184 38.6
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 5.6e-23 111.7 184 38.6
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 7.3e-23 111.3 174 40.8
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 1.2e-22 110.5 183 40.4
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.2e-22 110.5 183 36.6
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.0e-22 107.8 155 43.2
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 2.3e-21 106.3 169 39.1
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.3e-21 106.3 169 42.0
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 4.0e-21 105.5 175 39.4
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 6.8e-21 104.8 175 37.7
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 8.9e-21 104.4 175 38.9
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 1.5e-20 103.6 176 38.6
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 7.5e-20 101.3 164 39.6
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 6.4e-19 98.2 164 39.0
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 6.4e-19 98.2 164 39.0
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 6.4e-19 98.2 164 39.0
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 1.1e-18 97.4 168 40.5
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 2.4e-18 96.3 135 42.2
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 5.4e-18 95.1 168 39.3
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 7.0e-18 94.7 152 41.4
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 1.6e-17 93.6 171 36.3
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 3.5e-17 92.4 170 38.2
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.0e-17 91.7 141 45.4
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 7.8e-17 91.3 172 36.6
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 1.7e-16 90.1 170 36.5
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.7e-16 90.1 105 47.6
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.9e-16 89.0 155 41.3
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 1.9e-15 86.7 115 40.9
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.5e-15 86.3 100 46.0
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 2.5e-15 86.3 221 32.1
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 7.3e-15 84.7 114 45.6
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 9.5e-15 84.3 113 46.0
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.6e-14 83.6 164 35.4
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.8e-14 82.8 112 45.5
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.8e-13 80.1 113 45.1
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.0e-12 76.6 138 39.9
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 3.7e-11 72.4 188 35.1
Nn6g33912 Nelumbo nucifera HOM05D003790 ORTHO05D004481 4.9e-11 72.0 90 45.6
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 1.1e-10 70.9 168 32.1
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 1.1e-10 70.9 127 40.2
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 1.9e-10 70.1 170 34.7
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 5.4e-10 68.6 168 33.3
Eucgr.H01752 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.2e-09 67.4 54 61.1
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 2.7e-09 66.2 138 34.1
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 8.6e-08 61.2 182 28.6
CsaV3_4G001110 Cucumis sativus L. HOM05D003790 ORTHO05D044967 1.1e-07 60.8 145 31.0
SEGI_15713 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 5.6e-07 58.5 188 26.1
Sc17g0000580 Simmondsia chinensis HOM05D003790 ORTHO05D004481 1.2e-06 57.4 179 29.6
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 1.2e-06 57.4 194 31.4
ATR0580G176 Amborella trichopoda HOM05D003790 ORTHO05D004481 3.6e-06 55.8 106 36.8
Nn2g14986 Nelumbo nucifera HOM05D003790 ORTHO05D004481 4.7e-06 55.5 49 51.0
MELO3C017926.2 Cucumis melo HOM05D003790 ORTHO05D044967 8.1e-06 54.7 144 30.6


User provided reference genes

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