Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005825.4 Olea europaea HOM05D006102 ORTHO05D007550 0.0e+00 2186.0 1084 100.0
Oeu032185.2 Olea europaea HOM05D006102 ORTHO05D007550 1.4e-255 887.1 1052 52.3
Migut.N01612 Erythranthe guttata HOM05D006102 ORTHO05D007550 9.3e-188 661.8 1325 38.1
SGA_v2.0_scaffold11G05526 Striga asiatica HOM05D006102 ORTHO05D007550 8.7e-178 628.6 1435 35.5
Dinv43669 Davidia involucrata HOM05D006102 ORTHO05D007550 2.1e-168 597.4 1439 35.0
MSTRG.28175 Avicennia marina HOM05D006102 ORTHO05D007550 1.8e-162 577.8 1292 37.1
CSS0002341 Camellia sinensis var. sinensis HOM05D006102 ORTHO05D007550 2.1e-155 554.3 1432 33.2
Peaxi162Scf00803g00223 Petunia axillaris HOM05D006102 ORTHO05D007550 3.3e-153 547.0 1400 34.1
CAN.G1872.3 Capsicum annuum HOM05D006102 ORTHO05D007550 2.8e-152 543.9 1440 33.2
Cc02_g24460 Coffea canephora HOM05D006102 ORTHO05D007550 6.3e-152 542.7 1236 36.5
Solyc01g090860.3 Solanum lycopersicum HOM05D006102 ORTHO05D007550 9.1e-151 538.9 1382 33.4
Nitab4.5_0000859g0180 Nicotiana tabacum HOM05D006102 ORTHO05D007550 2.2e-149 534.3 1423 33.6
Sopen01g036600 Solanum pennellii HOM05D006102 ORTHO05D007550 5.5e-148 529.6 1429 33.2
Nitab4.5_0011151g0030 Nicotiana tabacum HOM05D006102 ORTHO05D007550 9.4e-148 528.9 1437 33.4
GSVIVG01018154001 Vitis vinifera HOM05D006102 ORTHO05D007550 4.4e-145 520.0 1213 35.3
Gohir.A11G078500 Gossypium hirsutum HOM05D006102 ORTHO05D007550 7.0e-143 512.7 1360 33.2
Lj7A537G47 Lonicera japonica HOM05D006102 ORTHO05D007550 2.0e-142 511.1 945 39.2
DCAR_015878 Daucus carota HOM05D006102 ORTHO05D007550 1.3e-141 508.4 1415 32.4
COL.COLO4_12485 Corchorus olitorius HOM05D006102 ORTHO05D007550 1.1e-140 505.4 1335 33.4
Thecc.01G384200 Theobroma cacao HOM05D006102 ORTHO05D007550 1.1e-140 505.4 1395 32.3
Ciclev10018476m.g Citrus clementina HOM05D006102 ORTHO05D007550 1.5e-140 505.0 1444 32.3
Gorai.007G088700 Gossypium raimondii HOM05D006102 ORTHO05D007550 8.0e-139 499.2 1413 31.6
Gohir.D11G083100 Gossypium hirsutum HOM05D006102 ORTHO05D007550 1.8e-138 498.0 1415 32.0
TWI59G0915 Tripterygium wilfordii HOM05D006102 ORTHO05D007550 5.2e-138 496.5 1434 31.7
unitig_748.g7113 Utricularia gibba HOM05D006102 ORTHO05D007550 1.5e-137 495.0 1287 33.3
Rhsim07G0031600 Rhododendron simsii HOM05D006102 ORTHO05D007550 5.3e-135 486.5 1369 32.2
Duzib138G0330 Durio zibethinus HOM05D006102 ORTHO05D007550 1.6e-134 485.0 1436 31.6
CiPaw.14G025500 Carya illinoinensis HOM05D006102 ORTHO05D007550 2.0e-134 484.6 1398 31.7
Cfa011148 Carpinus fangiana HOM05D006102 ORTHO05D007550 1.9e-132 478.0 1419 31.4
QL04p037175 Quercus lobata HOM05D006102 ORTHO05D007550 9.4e-132 475.7 1432 31.8
TAR375G0254 Trochodendron aralioides HOM05D006102 ORTHO05D007550 4.0e-130 470.3 1429 31.2
Actinidia12183 Actinidia chinensis HOM05D006102 ORTHO05D007550 4.4e-129 466.8 1090 36.0
vmacro13446 Vaccinium macrocarpon HOM05D006102 ORTHO05D007550 1.7e-128 464.9 1438 31.2
Eucgr.D02494 Eucalyptus grandis HOM05D006102 ORTHO05D007550 1.1e-127 462.2 1284 32.6
Sc02g0002820 Simmondsia chinensis HOM05D006102 ORTHO05D007550 1.3e-125 455.3 1419 32.4
Lalb_Chr07g0190291 Lupinus albus HOM05D006102 ORTHO05D007550 3.2e-124 450.7 1424 30.4
Glyma.03G032900 Glycine max HOM05D006102 ORTHO05D007550 1.6e-123 448.4 1427 30.8
Potri.014G066000 Populus trichocarpa HOM05D006102 ORTHO05D007550 3.6e-123 447.2 1416 31.4
AL6G53450 Arabidopsis lyrata HOM05D006102 ORTHO05D007550 8.0e-123 446.0 1346 31.1
Sabra14G0046000 Salix brachista HOM05D006102 ORTHO05D007550 1.5e-121 441.8 1427 31.0
MD07G1115100 Malus domestica HOM05D006102 ORTHO05D007550 2.0e-121 441.4 1416 31.1
Manes.05G049400 Manihot esculenta HOM05D006102 ORTHO05D007550 3.1e-119 434.1 857 37.9
TPR.G4985 Trifolium pratense HOM05D006102 ORTHO05D007550 4.1e-119 433.7 1423 30.4
AT4G00060 Arabidopsis thaliana HOM05D006102 ORTHO05D007550 7.0e-119 433.0 1345 31.2
PGR004G2833 Punica granatum HOM05D006102 ORTHO05D007550 1.0e-117 429.1 1368 30.8
THA.LOC104801481 Tarenaya hassleriana HOM05D006102 ORTHO05D007550 1.3e-117 428.7 1351 30.7
FAN03G1880 Fragaria x ananassa HOM05D006102 ORTHO05D007550 2.3e-117 427.9 1448 30.0
BcaC01g04890 Brassica carinata HOM05D006102 ORTHO05D007550 5.0e-117 426.8 1346 30.5
C03p32590 Brassica napus HOM05D006102 ORTHO05D007550 5.0e-117 426.8 1346 30.5
Nn1g00999 Nelumbo nucifera HOM05D006102 ORTHO05D007550 5.0e-117 426.8 1380 30.8
Lj3g0012088 Lotus japonicus HOM05D006102 ORTHO05D007550 6.6e-117 426.4 1441 30.6
BolC3t15598H Brassica oleracea HOM05D006102 ORTHO05D007550 8.6e-117 426.0 1346 30.5
FAN10G3138 Fragaria x ananassa HOM05D006102 ORTHO05D007550 8.6e-117 426.0 1463 30.3
CARHR248110 Cardamine hirsuta HOM05D006102 ORTHO05D007550 1.9e-116 424.9 1353 31.0
CANSAT56G2478 Cannabis sativa HOM05D006102 ORTHO05D007550 1.2e-115 422.2 1422 30.7
RcHm_v2.0_Chr1g0349071 Rosa chinensis HOM05D006102 ORTHO05D007550 1.2e-115 422.2 1422 30.8
Atru.chr5.237 Acer truncatum HOM05D006102 ORTHO05D007550 3.6e-115 420.6 819 38.5
Aa31LG5G130 Aethionema arabicum HOM05D006102 ORTHO05D007550 8.0e-115 419.5 1367 30.0
Cpa.g.sc49.145 Carica papaya HOM05D006102 ORTHO05D007550 8.0e-115 419.5 951 35.1
FAN06G2296 Fragaria x ananassa HOM05D006102 ORTHO05D007550 8.0e-115 419.5 1455 29.9
Ca_19854_v3 Cicer arietinum L. HOM05D006102 ORTHO05D007550 1.5e-113 415.2 1370 30.7
FAN06G2175 Fragaria x ananassa HOM05D006102 ORTHO05D007550 2.0e-113 414.8 1456 29.7
FAN10G3898 Fragaria x ananassa HOM05D006102 ORTHO05D007550 2.2e-112 411.4 1465 30.0
Hma1.2p1_0072F.1_g038370 Hydrangea macrophylla HOM05D006102 ORTHO05D007550 2.9e-112 411.0 685 43.1
CsaV3_3G007350 Cucumis sativus L. HOM05D006102 ORTHO05D007550 1.1e-111 409.1 1428 30.0
Hund27378 Selenicereus undatus HOM05D006102 ORTHO05D007550 2.4e-111 407.9 1365 31.0
AUR62013660 Chenopodium quinoa HOM05D006102 ORTHO05D007550 5.4e-111 406.8 1270 30.9
arahy.Tifrunner.gnm1.ann1.1V3LDQ Arachis hypogaea HOM05D006102 ORTHO05D007550 7.0e-111 406.4 1421 30.5
Thhalv10028362m.g Eutrema salsugineum HOM05D006102 ORTHO05D007550 2.7e-110 404.4 1365 30.4
Sp6g00130 Schrenkiella parvula HOM05D006102 ORTHO05D007550 4.6e-110 403.7 1347 30.2
AUR62004162 Chenopodium quinoa HOM05D006102 ORTHO05D007550 5.9e-110 403.3 1255 31.6
BcaB01g02181 Brassica carinata HOM05D006102 ORTHO05D007550 7.8e-110 402.9 1341 30.3
Carub.0006s3716 Capsella rubella HOM05D006102 ORTHO05D007550 1.0e-109 402.5 1358 30.6
A03p27130 Brassica napus HOM05D006102 ORTHO05D007550 2.3e-109 401.4 1339 29.6
arahy.Tifrunner.gnm1.ann1.W52PF9 Arachis hypogaea HOM05D006102 ORTHO05D007550 3.9e-109 400.6 1427 30.1
BraA03t11926Z Brassica rapa HOM05D006102 ORTHO05D007550 8.6e-109 399.4 1339 29.6
Prupe.2G137200 Prunus persica HOM05D006102 ORTHO05D007550 3.3e-108 397.5 1435 29.9
EL10Ac1g00837 Beta vulgaris HOM05D006102 ORTHO05D007550 1.6e-107 395.2 1279 30.3
Medtr4g027425 Medicago truncatula HOM05D006102 ORTHO05D007550 2.8e-107 394.4 1447 28.7
Aqoxy7G00755 Aquilegia oxysepala HOM05D006102 ORTHO05D007550 6.8e-106 389.8 1431 30.3
ECA240G4781 Erigeron canadensis HOM05D006102 ORTHO05D007550 1.2e-105 389.0 1203 32.0
Sed0013724 Sechium edule HOM05D006102 ORTHO05D007550 6.4e-104 383.3 1433 29.2
ClCG05G000200 Citrullus lanatus HOM05D006102 ORTHO05D007550 4.6e-102 377.1 848 35.4
QL93p0363_0004 Quercus lobata HOM05D006102 ORTHO05D007550 1.0e-101 375.9 532 44.2
Haze_02710 Corylus avellana HOM05D006102 ORTHO05D007550 1.7e-101 375.2 754 37.1
MELO3C005957.2 Cucumis melo HOM05D006102 ORTHO05D007550 1.1e-100 372.5 787 36.3
VMungo0331G0964 Vigna mungo HOM05D006102 ORTHO05D007550 2.5e-100 371.3 1096 32.7
Ah.05g173810 Amaranthus hybridus HOM05D006102 ORTHO05D007550 2.1e-99 368.2 1239 30.1
Psat0s3685g0040 Pisum sativum HOM05D006102 ORTHO05D007550 1.8e-98 365.2 1116 31.9
PSO017G2680 Papaver somniferum HOM05D006102 ORTHO05D007550 2.3e-98 364.8 1412 28.8
FvH4_7g11041 Fragaria vesca HOM05D006102 ORTHO05D007550 6.8e-98 363.2 785 37.1
PSO170G5751 Papaver somniferum HOM05D006102 ORTHO05D007550 9.8e-97 359.4 1243 30.2
HanXRQChr03g0093281 Helianthus annuus HOM05D006102 ORTHO05D007550 3.0e-85 321.2 1249 30.3
Phvul.010G071766 Phaseolus vulgaris HOM05D006102 ORTHO05D007550 2.6e-81 308.1 693 35.9
Lsat_1_v5_gn_3_129280 Lactuca sativa HOM05D006102 ORTHO05D007550 1.0e-77 296.2 1319 28.3
HPP92_005330 Vanilla planifolia HOM05D006102 ORTHO05D007550 2.1e-67 261.9 766 31.6
ATR0317G095 Amborella trichopoda HOM05D006102 ORTHO05D007550 1.4e-66 259.2 758 31.7
Hma1.2p1_0072F.1_g038380 Hydrangea macrophylla HOM05D006102 ORTHO05D007550 1.5e-57 229.2 202 61.9
Zm00001eb274180 Zea mays HOM05D006102 ORTHO05D007550 1.3e-45 189.5 746 27.7
Cpa.g.sc49.147 Carica papaya HOM05D006102 ORTHO05D007550 5.3e-26 124.4 235 36.2
Atru.chr5.236 Acer truncatum HOM05D006102 ORTHO05D007550 1.5e-23 116.3 235 35.3
Cfa011155 Carpinus fangiana HOM05D006102 ORTHO05D007550 7.2e-23 114.0 317 33.8
PGSC0003DMG401026018 Solanum tuberosum HOM05D006102 ORTHO05D007550 1.6e-22 112.8 167 41.9
VMungo0331G1545 Vigna mungo HOM05D006102 ORTHO05D007550 3.6e-22 111.7 232 34.9
Phvul.010G071832 Phaseolus vulgaris HOM05D006102 ORTHO05D007550 3.0e-21 108.6 258 34.1
Cfa011150 Carpinus fangiana HOM05D006102 ORTHO05D007550 1.1e-20 106.7 404 29.5
Cfa011153 Carpinus fangiana HOM05D006102 ORTHO05D007550 6.3e-19 100.9 180 39.4
Psat7g163200 Pisum sativum HOM05D004547 ORTHO05D005133 7.7e-17 94.0 222 31.1
Haze_02708 Corylus avellana HOM05D006102 ORTHO05D007550 2.2e-16 92.4 67 59.7
Mapoly0072s0019 Marchantia polymorpha HOM05D006102 ORTHO05D007550 8.0e-14 84.0 603 25.0
Actinidia27577 Actinidia chinensis HOM05D006102 ORTHO05D007550 2.6e-12 79.0 68 60.3
vmacro22440 Vaccinium macrocarpon HOM05D006102 ORTHO05D007550 7.5e-12 77.4 61 67.2
Glyma.01G135400 Glycine max HOM05D006102 ORTHO05D007550 4.8e-11 74.7 70 61.4
BolC3t16200H Brassica oleracea HOM05D006102 ORTHO05D007550 8.3e-11 73.9 56 69.6
C03p39290 Brassica napus HOM05D006102 ORTHO05D007550 1.1e-10 73.6 56 69.6
Os06g0669275 Oryza sativa ssp. japonica HOM05D006102 ORTHO05D007550 5.4e-10 71.2 70 54.3
SEGI_10795 Sequoiadendron giganteum HOM05D006102 ORTHO05D007550 1.7e-08 66.2 170 28.2
RcHm_v2.0_Chr1g0316831 Rosa chinensis HOM05D006102 ORTHO05D007550 9.4e-07 60.5 33 87.9
Hma1.2p1_0072F.1_g038360 Hydrangea macrophylla HOM05D006102 ORTHO05D007550 2.7e-06 58.9 51 54.9
Pp3c16_11310 Physcomitrium patens HOM05D006102 ORTHO05D007550 3.6e-06 58.5 773 23.0
Lj7P537G26 Lonicera japonica HOM05D006102 ORTHO05D007550 6.1e-06 57.8 33 81.8
RcHm_v2.0_Chr2g0167831 Rosa chinensis HOM05D006102 ORTHO05D007550 6.1e-06 57.8 70 50.0


User provided reference genes

Program Settings