Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005774.1 Olea europaea HOM05D004001 ORTHO05D004559 6.3e-102 374.4 231 100.0
Migut.B01647 Erythranthe guttata HOM05D004001 ORTHO05D004559 5.4e-69 265.0 214 72.4
MSTRG.20759 Avicennia marina HOM05D004001 ORTHO05D004559 1.7e-67 260.0 214 70.1
Actinidia12272 Actinidia chinensis HOM05D004001 ORTHO05D004559 3.3e-66 255.8 215 67.9
Lj9C572T3 Lonicera japonica HOM05D004001 ORTHO05D004559 4.3e-66 255.4 214 69.6
Cc02_g36540 Coffea canephora HOM05D004001 ORTHO05D004559 4.7e-65 251.9 214 66.8
SalBow5G4135 Salvia bowleyana HOM05D004001 ORTHO05D004559 1.4e-64 250.4 230 64.3
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 1.8e-64 250.0 214 67.3
vmacro13388 Vaccinium macrocarpon HOM05D004001 ORTHO05D004559 4.4e-63 245.4 215 66.0
Actinidia31422 Actinidia chinensis HOM05D004001 ORTHO05D004559 3.7e-62 242.3 215 65.6
Sopen01g037250 Solanum pennellii HOM05D004001 ORTHO05D004559 5.1e-59 231.9 214 66.8
unitig_8.g3817 Utricularia gibba HOM05D004001 ORTHO05D004559 5.1e-59 231.9 229 60.7
Solyc01g091500.3 Solanum lycopersicum HOM05D004001 ORTHO05D004559 6.6e-59 231.5 214 66.4
Rhsim07G0025900 Rhododendron simsii HOM05D004001 ORTHO05D004559 8.6e-59 231.1 236 60.6
CSS0038978 Camellia sinensis var. sinensis HOM05D004001 ORTHO05D004559 2.5e-58 229.6 214 63.6
TAR629G2254 Trochodendron aralioides HOM05D004001 ORTHO05D004559 3.3e-58 229.2 214 62.6
Haze_16831 Corylus avellana HOM05D004001 ORTHO05D004559 5.6e-58 228.4 214 68.7
QL08p051978 Quercus lobata HOM05D004001 ORTHO05D004559 1.6e-57 226.9 214 61.7
SGA_v2.0_scaffold95G28893 Striga asiatica HOM05D004001 ORTHO05D004559 1.6e-57 226.9 214 63.1
Prupe.2G147400 Prunus persica HOM05D004001 ORTHO05D004559 2.1e-57 226.5 215 61.4
Glyma.18G221900 Glycine max HOM05D004001 ORTHO05D004559 4.7e-57 225.3 209 62.2
Rhsim07G0026000 Rhododendron simsii HOM05D004001 ORTHO05D004559 1.4e-56 223.8 261 55.2
CiPaw.01G260600 Carya illinoinensis HOM05D004001 ORTHO05D004559 2.3e-56 223.0 214 59.8
HanXRQChr03g0093811 Helianthus annuus HOM05D004001 ORTHO05D004559 1.2e-55 220.7 219 57.1
MD02G1201400 Malus domestica HOM05D004001 ORTHO05D004559 2.0e-55 219.9 215 60.9
MELO3C006177.2 Cucumis melo HOM05D004001 ORTHO05D004559 2.6e-55 219.5 214 58.4
FAN03G0266 Fragaria x ananassa HOM05D004001 ORTHO05D004559 2.6e-55 219.5 214 57.5
arahy.Tifrunner.gnm1.ann1.2UV9R4 Arachis hypogaea HOM05D004001 ORTHO05D004559 5.8e-55 218.4 214 57.5
RcHm_v2.0_Chr1g0350831 Rosa chinensis HOM05D004001 ORTHO05D004559 7.5e-55 218.0 214 57.9
FvH4_7g12090 Fragaria vesca HOM05D004001 ORTHO05D004559 9.9e-55 217.6 214 57.0
FAN06G4715 Fragaria x ananassa HOM05D004001 ORTHO05D004559 9.9e-55 217.6 214 57.0
FAN10G1409 Fragaria x ananassa HOM05D004001 ORTHO05D004559 9.9e-55 217.6 214 57.0
FAN06G2206 Fragaria x ananassa HOM05D004001 ORTHO05D004559 1.3e-54 217.2 214 57.0
arahy.Tifrunner.gnm1.ann1.CI1NNE Arachis hypogaea HOM05D004001 ORTHO05D004559 1.7e-54 216.9 214 57.0
Oeu037907.1 Olea europaea HOM05D004001 ORTHO05D004559 2.2e-54 216.5 231 63.2
MBI11_g23939_MAGBIO Magnolia biondii HOM05D004001 ORTHO05D004559 3.7e-54 215.7 214 59.8
Nitab4.5_0010473g0020 Nicotiana tabacum HOM05D004001 ORTHO05D004559 1.1e-53 214.2 214 59.3
Eucgr.E01409 Eucalyptus grandis HOM05D004001 ORTHO05D004559 1.4e-53 213.8 214 57.0
CsaV3_3G009550 Cucumis sativus L. HOM05D004001 ORTHO05D004559 4.1e-53 212.2 214 57.0
Sed0014964 Sechium edule HOM05D004001 ORTHO05D004559 5.4e-53 211.8 214 56.1
arahy.Tifrunner.gnm1.ann1.9J1L2I Arachis hypogaea HOM05D004001 ORTHO05D004559 2.1e-52 209.9 214 63.6
arahy.Tifrunner.gnm1.ann1.EYC1DY Arachis hypogaea HOM05D004001 ORTHO05D004559 2.1e-52 209.9 214 63.6
Lalb_Chr07g0189651 Lupinus albus HOM05D004001 ORTHO05D004559 2.1e-52 209.9 214 57.9
PGSC0003DMG400012752 Solanum tuberosum HOM05D004001 ORTHO05D004559 2.1e-52 209.9 214 58.9
Lalb_Chr12g0208391 Lupinus albus HOM05D004001 ORTHO05D004559 7.8e-52 208.0 214 56.5
Lalb_Chr12g0208441 Lupinus albus HOM05D004001 ORTHO05D004559 7.8e-52 208.0 214 56.5
arahy.Tifrunner.gnm1.ann1.0Y1PWL Arachis hypogaea HOM05D004001 ORTHO05D004559 1.0e-51 207.6 214 55.1
Thecc.01G374400 Theobroma cacao HOM05D004001 ORTHO05D004559 8.6e-51 204.5 213 64.8
Nitab4.5_0004320g0020 Nicotiana tabacum HOM05D004001 ORTHO05D004559 1.1e-50 204.1 214 65.0
arahy.Tifrunner.gnm1.ann1.H5PXMS Arachis hypogaea HOM05D004001 ORTHO05D004559 1.9e-50 203.4 214 55.6
COL.COLO4_12572 Corchorus olitorius HOM05D004001 ORTHO05D004559 1.9e-50 203.4 214 64.0
CANSAT56G0321 Cannabis sativa HOM05D004001 ORTHO05D004559 3.3e-50 202.6 214 55.6
FAN10G1690 Fragaria x ananassa HOM05D004001 ORTHO05D004559 3.3e-50 202.6 214 54.2
PGR042G2753 Punica granatum HOM05D004001 ORTHO05D004559 5.6e-50 201.8 213 55.9
Gorai.007G092200 Gossypium raimondii HOM05D004001 ORTHO05D004559 3.6e-49 199.1 214 58.9
arahy.Tifrunner.gnm1.ann1.JKPH3R Arachis hypogaea HOM05D004001 ORTHO05D004559 8.1e-49 198.0 214 53.3
Gohir.D12G105400 Gossypium hirsutum HOM05D004001 ORTHO05D004559 8.1e-49 198.0 211 63.5
ClCG05G002120 Citrullus lanatus HOM05D004001 ORTHO05D004559 1.4e-48 197.2 208 54.3
BcaB02g08998 Brassica carinata HOM05D004001 ORTHO05D004559 2.6e-47 193.0 214 54.2
Cfa001702 Carpinus fangiana HOM05D004001 ORTHO05D004559 3.4e-47 192.6 214 62.1
Sc26g0001190 Simmondsia chinensis HOM05D004001 ORTHO05D004559 3.4e-47 192.6 214 55.6
SGA_v2.0_scaffold153G37027 Striga asiatica HOM05D004001 ORTHO05D001724 3.4e-47 192.6 214 57.5
Aqoxy7G00586 Aquilegia oxysepala HOM05D004001 ORTHO05D004559 2.2e-46 189.9 214 54.2
CAN.G170.4 Capsicum annuum HOM05D004001 ORTHO05D004559 1.4e-45 187.2 214 60.7
GSVIVG01027630001 Vitis vinifera HOM05D004001 ORTHO05D004559 1.9e-45 186.8 214 58.9
Potri.014G071400 Populus trichocarpa HOM05D004001 ORTHO05D004559 5.4e-45 185.3 214 59.8
Manes.05G044000 Manihot esculenta HOM05D004001 ORTHO05D004559 7.1e-45 184.9 214 53.7
Atru.chr5.325 Acer truncatum HOM05D004001 ORTHO05D004559 3.5e-44 182.6 214 51.9
Gorai.008G114700 Gossypium raimondii HOM05D004001 ORTHO05D004559 7.8e-44 181.4 195 63.6
PSO782G3046 Papaver somniferum HOM05D004001 ORTHO05D004559 1.0e-43 181.0 214 49.1
PSO478G3708 Papaver somniferum HOM05D004001 ORTHO05D004559 2.3e-43 179.9 214 49.5
TAR636G3381 Trochodendron aralioides HOM05D004001 ORTHO05D004559 5.1e-43 178.7 214 52.3
Sp4g27490 Schrenkiella parvula HOM05D004001 ORTHO05D004559 6.6e-43 178.3 214 51.9
Sabra14G0050700 Salix brachista HOM05D004001 ORTHO05D004559 1.2e-41 174.1 214 57.5
Duzib138G1007 Durio zibethinus HOM05D004001 ORTHO05D004559 1.6e-41 173.7 211 60.2
Phvul.008G075200 Phaseolus vulgaris HOM05D004001 ORTHO05D004559 2.1e-41 173.3 151 64.2
AUR62013619 Chenopodium quinoa HOM05D004001 ORTHO05D004559 2.8e-41 172.9 214 59.3
CDE04G0282 Ceratophyllum demersum HOM05D004001 ORTHO05D004559 8.1e-41 171.4 213 47.9
Lj1g0027935 Lotus japonicus HOM05D004001 ORTHO05D004559 1.1e-40 171.0 213 47.9
Lj7C526G13 Lonicera japonica HOM05D004001 ORTHO05D004559 2.4e-40 169.9 214 52.8
unitig_31.g34038 Utricularia gibba HOM05D004001 ORTHO05D004559 5.3e-40 168.7 184 59.2
Os03g0127600 Oryza sativa ssp. japonica HOM05D004001 ORTHO05D004559 2.0e-39 166.8 214 47.7
CARHR140650 Cardamine hirsuta HOM05D004001 ORTHO05D004559 3.4e-39 166.0 214 49.1
Gohir.D11G086300 Gossypium hirsutum HOM05D004001 ORTHO05D004559 4.4e-39 165.6 214 50.0
Medtr7g075140 Medicago truncatula HOM05D004001 ORTHO05D004559 1.3e-38 164.1 206 49.5
EL10Ac1g00911 Beta vulgaris HOM05D004001 ORTHO05D004559 2.9e-38 162.9 214 50.5
C04p06430 Brassica napus HOM05D004001 ORTHO05D004559 2.9e-38 162.9 214 53.3
BolC4t22266H Brassica oleracea HOM05D004001 ORTHO05D004559 3.8e-38 162.5 228 52.2
Ca_07831_v3 Cicer arietinum L. HOM05D004001 ORTHO05D004559 4.9e-38 162.2 214 46.7
TWI14G1161 Tripterygium wilfordii HOM05D004001 ORTHO05D004559 6.4e-38 161.8 215 47.9
A05p05490 Brassica napus HOM05D004001 ORTHO05D004559 1.1e-37 161.0 214 53.3
ECA240G2591 Erigeron canadensis HOM05D004001 ORTHO05D004559 1.4e-37 160.6 206 48.5
Glyma.09G268000 Glycine max HOM05D004001 ORTHO05D004559 1.4e-37 160.6 151 61.6
Zm00001eb403560 Zea mays HOM05D004001 ORTHO05D004559 1.4e-37 160.6 214 46.3
BcaC02g12205 Brassica carinata HOM05D004001 ORTHO05D004559 5.4e-37 158.7 214 51.9
Lsat_1_v5_gn_3_133301 Lactuca sativa HOM05D004001 ORTHO05D004559 1.2e-36 157.5 214 47.2
SHI13515 Sapria himalayana HOM05D004001 ORTHO05D004559 1.3e-35 154.1 214 46.3
AT2G45460 Arabidopsis thaliana HOM05D004001 ORTHO05D004559 1.7e-35 153.7 214 46.7
Aa31LG1G26960 Aethionema arabicum HOM05D004001 ORTHO05D004559 3.0e-35 152.9 211 44.5
AL4G44630 Arabidopsis lyrata HOM05D004001 ORTHO05D004559 3.0e-35 152.9 214 46.7
BraA05t19519Z Brassica rapa HOM05D004001 ORTHO05D004559 8.7e-35 151.4 228 50.0
Psat3g115320 Pisum sativum HOM05D004001 ORTHO05D004559 3.3e-34 149.4 214 49.1
arahy.Tifrunner.gnm1.ann1.RB3Z54 Arachis hypogaea HOM05D004001 ORTHO05D004559 5.6e-34 148.7 214 45.3
Peaxi162Scf00021g01316 Petunia axillaris HOM05D004001 ORTHO05D004559 5.6e-34 148.7 214 53.3
Hund17008 Selenicereus undatus HOM05D004001 ORTHO05D004559 1.3e-33 147.5 214 53.7
AUR62004229 Chenopodium quinoa HOM05D004001 ORTHO05D004559 1.1e-32 144.4 250 49.2
Thhalv10001303m.g Eutrema salsugineum HOM05D004001 ORTHO05D004559 1.8e-32 143.7 214 52.8
Gohir.A12G102200 Gossypium hirsutum HOM05D004001 ORTHO05D004559 1.8e-32 143.7 214 46.3
HPP92_018394 Vanilla planifolia HOM05D004001 ORTHO05D004559 3.1e-32 142.9 211 44.1
ATR0757G164 Amborella trichopoda HOM05D004001 ORTHO05D004559 2.6e-31 139.8 214 44.4
Nn4g26437 Nelumbo nucifera HOM05D004001 ORTHO05D004559 7.6e-31 138.3 213 48.4
Carub.0004s2807 Capsella rubella HOM05D004001 ORTHO05D004559 2.4e-29 133.3 214 49.5
arahy.Tifrunner.gnm1.ann1.5M5P73 Arachis hypogaea HOM05D004001 ORTHO05D004559 1.6e-28 130.6 214 40.7
SEGI_05063 Sequoiadendron giganteum HOM05D004001 ORTHO05D004559 3.5e-28 129.4 205 41.5
Ciclev10018784m.g Citrus clementina HOM05D004001 ORTHO05D004559 1.1e-26 124.4 214 47.2
AagrBONN_evm.TU.Sc2ySwM_362.1643 Anthoceros agrestis HOM05D004001 ORTHO05D004559 1.5e-26 124.0 206 37.9
TPR.G26922 Trifolium pratense HOM05D004001 ORTHO05D004559 3.1e-24 116.3 143 52.4
arahy.Tifrunner.gnm1.ann1.Q8AXKZ Arachis hypogaea HOM05D005562 ORTHO05D007785 2.5e-21 106.7 150 47.3
DCAR_006877 Daucus carota HOM05D004001 ORTHO05D004559 1.6e-20 104.0 214 45.8
Cpa.g.sc18.133 Carica papaya HOM05D004001 ORTHO05D004559 3.0e-19 99.8 118 51.7
Zm00001eb002020 Zea mays HOM05D004001 ORTHO05D004559 2.8e-17 93.2 214 34.1
SEGI_21780 Sequoiadendron giganteum HOM05D004001 ORTHO05D004559 9.0e-16 88.2 115 46.1
Ah.16g103740 Amaranthus hybridus HOM05D004001 ORTHO05D004559 2.5e-13 80.1 216 42.1
Mapoly0005s0201 Marchantia polymorpha HOM05D004001 ORTHO05D004559 8.7e-11 71.6 208 29.3
Pp3c5_28010 Physcomitrium patens HOM05D004001 ORTHO05D004559 1.9e-10 70.5 152 32.2
Dinv00152 Davidia involucrata HOM05D026811 ORTHO05D004559 1.1e-08 64.7 56 60.7
Dinv00153 Davidia involucrata HOM05D004001 ORTHO05D004559 1.1e-08 64.7 56 60.7
arahy.Tifrunner.gnm1.ann1.K6PBMX Arachis hypogaea HOM05D004001 ORTHO05D004559 1.3e-06 57.8 44 65.9
CBR_g40168 Chara braunii HOM05D004001 ORTHO05D004559 1.3e-06 57.8 201 24.4
Mapoly0048s0074 Marchantia polymorpha HOM05D004001 ORTHO05D004559 8.5e-06 55.1 87 36.8


User provided reference genes

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