Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 5.7e-283 976.9 474 100.0
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 1.2e-192 676.8 498 67.9
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 6.7e-191 671.0 477 69.8
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 9.3e-185 650.6 481 65.5
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 4.3e-182 641.7 492 64.2
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.3e-181 640.2 492 63.8
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.5e-179 633.3 486 63.6
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 1.5e-179 633.3 486 65.6
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.9e-178 629.0 487 63.0
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 3.2e-177 625.5 431 68.9
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 3.2e-177 625.5 466 67.6
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 2.0e-174 616.3 487 63.0
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 1.3e-173 613.6 485 62.9
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 5.5e-169 598.2 396 72.2
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 1.0e-167 594.0 474 61.2
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 6.3e-165 584.7 476 61.3
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 8.2e-165 584.3 454 63.9
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 8.2e-165 584.3 466 60.9
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 5.3e-164 581.6 480 62.1
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 2.0e-163 579.7 479 59.7
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 3.5e-163 578.9 437 64.5
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 3.5e-163 578.9 437 64.5
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 7.7e-163 577.8 472 60.6
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.3e-162 577.0 475 62.1
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 7.2e-161 571.2 475 58.3
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 1.6e-160 570.1 477 59.1
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.6e-160 568.9 484 58.1
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 1.8e-159 566.6 471 60.9
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 2.3e-159 566.2 488 59.8
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 4.0e-159 565.5 471 60.7
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 6.7e-159 564.7 460 61.5
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 6.7e-159 564.7 478 58.4
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 6.7e-159 564.7 480 58.8
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 1.5e-158 563.5 487 57.5
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 2.0e-158 563.1 480 60.0
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 4.4e-158 562.0 472 60.2
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.4e-156 557.0 461 61.8
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 7.0e-156 554.7 487 57.3
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 7.0e-156 554.7 479 59.9
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 9.1e-156 554.3 475 59.2
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 1.6e-155 553.5 445 61.3
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 2.0e-155 553.1 441 60.8
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 2.7e-155 552.7 479 58.0
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 7.7e-155 551.2 478 57.3
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 1.0e-154 550.8 474 57.0
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 3.8e-154 548.9 456 60.1
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 5.0e-154 548.5 473 58.4
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.1e-153 547.4 364 70.1
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 5.5e-153 545.0 495 58.4
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 9.4e-153 544.3 478 60.5
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 1.6e-152 543.5 478 59.8
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 2.7e-152 542.7 379 65.7
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 3.6e-152 542.3 495 58.0
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 8.0e-152 541.2 448 61.2
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 1.0e-151 540.8 467 57.6
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 4.0e-151 538.9 467 58.2
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 8.8e-151 537.7 462 59.1
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 2.0e-150 536.6 478 57.1
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 3.4e-150 535.8 430 60.2
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 3.7e-149 532.3 455 57.6
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.2e-147 527.3 497 55.3
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 3.5e-147 525.8 472 57.4
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 4.5e-147 525.4 482 56.2
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 7.7e-147 524.6 375 65.6
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 5.5e-145 518.5 454 57.0
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 3.6e-144 515.8 482 56.6
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 8.0e-144 514.6 458 58.1
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 7.5e-142 508.1 496 56.2
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 7.5e-142 508.1 473 56.0
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 9.8e-142 507.7 496 56.0
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 3.1e-140 502.7 511 53.4
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 3.1e-140 502.7 453 56.5
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 5.4e-140 501.9 454 56.4
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 7.0e-140 501.5 445 57.3
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 7.8e-139 498.0 448 56.2
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.3e-138 497.3 471 56.1
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 1.7e-138 496.9 468 55.6
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.7e-138 496.9 471 55.6
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 1.7e-138 496.9 476 56.1
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 1.1e-137 494.2 471 55.6
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.2e-136 490.7 471 55.4
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 4.7e-136 488.8 467 54.8
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 4.7e-136 488.8 441 56.7
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 1.8e-135 486.9 492 53.5
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 6.8e-135 485.0 437 56.5
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 8.9e-135 484.6 410 59.0
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 8.9e-135 484.6 410 59.0
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 8.9e-135 484.6 410 59.0
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 7.5e-134 481.5 416 56.5
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 1.8e-132 476.9 467 53.5
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 7.0e-132 474.9 483 51.6
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 2.0e-131 473.4 457 55.8
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.7e-130 470.3 500 50.8
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 5.6e-129 465.3 463 53.1
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 5.8e-126 455.3 483 50.5
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 3.7e-125 452.6 375 57.6
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.6e-123 447.2 434 52.3
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 3.5e-123 446.0 400 55.8
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 1.4e-116 424.1 314 67.2
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.8e-103 380.6 417 47.0
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.2e-99 367.9 481 43.7
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 6.9e-87 325.5 207 71.5
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 5.3e-79 299.3 265 58.5
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 2.6e-78 297.0 358 45.3
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 3.4e-78 296.6 261 55.9
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 1.0e-77 295.0 479 39.0
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 2.2e-77 293.9 364 44.2
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 8.2e-72 275.4 396 40.9
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 4.5e-62 243.0 315 43.2
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 3.1e-55 220.3 390 35.6
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 5.3e-47 193.0 206 51.0
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 4.0e-34 150.2 111 64.9
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 7.0e-31 139.4 191 42.4
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.7e-30 137.5 415 29.9
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 5.9e-30 136.3 383 29.8
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.9e-29 134.0 437 29.7
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 2.5e-28 131.0 129 50.4
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 5.5e-28 129.8 404 29.7
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 6.1e-27 126.3 340 32.6
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 2.0e-22 111.3 53 90.6
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.9e-20 104.8 228 34.6
AagrBONN_evm.TU.Sc2ySwM_362.1561 Anthoceros agrestis HOM05D006399 ORTHO05D007988 5.6e-12 76.6 235 28.9
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 5.4e-07 60.1 112 36.6


User provided reference genes

Program Settings